Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: -
Assembly: GCA_944567795.1
Location: CALYMS010000013.1:723688-726380[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.14 2.8e+02 1.8 3.2 18 43 8 30 6 32 0.79

2 19 1.5 2.8e+03 -1.5 0.2 19 43 37 58 33 59 0.70

3 19 1.7e-06 0.0032 17.6 0.4 18 44 67 90 61 90 0.94

4 19 8e-06 0.016 15.4 1.7 17 44 97 121 95 121 0.92

5 19 0.11 2.2e+02 2.1 0.1 18 44 123 146 122 146 0.86

6 19 6.8e-07 0.0013 18.8 2.9 17 44 153 177 147 177 0.92

7 19 0.43 8.4e+02 0.2 2.0 18 43 185 207 182 208 0.82

8 19 0.86 1.7e+03 -0.7 0.0 22 44 221 240 221 240 0.71

9 19 0.75 1.5e+03 -0.5 0.1 11 43 264 293 260 294 0.67

10 19 6.6 1.3e+04 -3.6 0.1 18 25 299 306 298 310 0.79

11 19 1.7 3.2e+03 -1.6 0.1 14 29 324 339 316 351 0.75

12 19 0.019 38 4.5 2.7 14 44 381 408 375 409 0.84

13 19 0.008 16 5.8 8.3 2 44 398 437 397 437 0.93

14 19 0.65 1.3e+03 -0.3 2.4 14 43 440 466 438 467 0.69

15 19 0.06 1.2e+02 3.0 0.7 25 43 479 496 473 497 0.79

16 19 0.9 1.8e+03 -0.8 0.9 9 29 495 515 494 526 0.83

17 19 2.2e-05 0.044 13.9 2.8 11 43 530 559 516 560 0.87

18 19 2.7 5.4e+03 -2.3 0.0 14 27 576 589 572 591 0.78

19 19 2.6 5e+03 -2.3 0.1 17 27 609 619 603 620 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.14	2.8e+02	1.8	3.2	18	43	8	30	6	32	0.79
2	19	1.5	2.8e+03	-1.5	0.2	19	43	37	58	33	59	0.70
3	19	1.7e-06	0.0032	17.6	0.4	18	44	67	90	61	90	0.94
4	19	8e-06	0.016	15.4	1.7	17	44	97	121	95	121	0.92
5	19	0.11	2.2e+02	2.1	0.1	18	44	123	146	122	146	0.86
6	19	6.8e-07	0.0013	18.8	2.9	17	44	153	177	147	177	0.92
7	19	0.43	8.4e+02	0.2	2.0	18	43	185	207	182	208	0.82
8	19	0.86	1.7e+03	-0.7	0.0	22	44	221	240	221	240	0.71
9	19	0.75	1.5e+03	-0.5	0.1	11	43	264	293	260	294	0.67
10	19	6.6	1.3e+04	-3.6	0.1	18	25	299	306	298	310	0.79
11	19	1.7	3.2e+03	-1.6	0.1	14	29	324	339	316	351	0.75
12	19	0.019	38	4.5	2.7	14	44	381	408	375	409	0.84
13	19	0.008	16	5.8	8.3	2	44	398	437	397	437	0.93
14	19	0.65	1.3e+03	-0.3	2.4	14	43	440	466	438	467	0.69
15	19	0.06	1.2e+02	3.0	0.7	25	43	479	496	473	497	0.79
16	19	0.9	1.8e+03	-0.8	0.9	9	29	495	515	494	526	0.83
17	19	2.2e-05	0.044	13.9	2.8	11	43	530	559	516	560	0.87
18	19	2.7	5.4e+03	-2.3	0.0	14	27	576	589	572	591	0.78
19	19	2.6	5e+03	-2.3	0.1	17	27	609	619	603	620	0.84

Sequence Information

Coding Sequence: ATGGCTGAGTTTCCTGAATACATCTGTGACTACTGCAGCCGATCCTTCACTAGAAAGTACAACATACTAACCCACATCACAAATTGTCACATCAATGACTCATGTTTCTGTGTCATTTGCGAGCAAAAGTTTGGGAGTCCAGCGGGGCTTCAACTGCACCTGAGCAGAGGCCACAACAGGCTTCACCAGCCTAACCCGGAGTGTGATCTATGCGGGAAGATATTTACTCGGAAACAAAACATCATCTCGCATTTACAAACCAAGCATTCTATAGGTACAGCACCTGAAGTAGCCTGTGAAATTTGCAACAGAAAGTTTACCAACACCAGAAATCTACGAAGGCATATTAGGAAACTGCACAACCCTACTTGTACTGAATGTGGTAAAGTTTTCAGACTCAAGGAGTCACTGTTTGCACATATGCAATCGGTTCACAAGGTGACAGTGGATGACACAAACAGATGCCGGCTGTGCGAGAGAGTTTACTCCTGCAGGAAGAACTTGAAACGGCATCTGAGAACTGTACACAATGTTGCTCTGCCTAGCGACTTTATTTGTGAACACTGCTCTAGAGTGTTCTGCGATAAGACGGGCCTTGATACACATATGTCTCTACACcataaattagaaaataagAATCCTCATACTCATCCTTGTGAATGTGGGAAGGTTTTCAACATGGAGGCGGAGCTAAGACAACATGTGAAGTCCGATCACTCGTTCGATGACTTCTACTCGTACTGCAAGAACTATCTCATTCAAACAGAGAAGAGGAAAGCTGAGAAATTGAAAAGACAATCCCCAGTTCACACTTGTGAAGTTTGCCAAGAATATTTTGGATCGATCTTTAGTCTCAGGATACATATGGAAGAGAAACATGACCTGCGATACTACACCTGCAATGTTTGCTTCGCTAAGTTCTTCAGCCAGGAAGGGATAGCACAGCATCAGAAAGAGTGCATACCACCAGATGATGTGTATCGGTGTAGCCAGTGCGACAAGCTTTTCACTGAGAAACTCAGCCTTAAATTTCACGTGAAAGTGTTTCATCCGCAAGCGAAGGAACTGTCGAGCCCGAGCTCGGAGAGATCGAGCAGTCCCGTGATAGTCAATAACGTGTTGGAGGACGACGTGGAAGAGAGGAATGAGCTGAAATGCGAATACTGCTATCAGCTATTTAAGTCCAAACGGAACGTAAAGAAGCACATAGAACACGTGCACCGTGGCATGCAGAGGTACAAATGTCCGCAGTGCGACACACATTTCAAGGAGAGCAGGAACTTGCGCAAGCATATTCGGTCCAAGCATCCGCACTCGTCCACGTTCCCGCAGTGCCACTTGTGTCGGAAGCGTTTCGAATCGGCTCAGGCCTGCAAGATCCACTTGAAACAGGCGCATTCGTTCGTCTCTGACACATTTCCCTGCGAGCTATGCTCATTGTCATACGACTCCAGCGAGTCGTTAAGCCTTCACATGAGGACGAAGCACGAGAATGACGATAATCTCATCAAATGCGAAGACTGTTCTCTTGTGTTCAAGGGACACGATACATTCGAGAAACACAAGGAGAAATGTCAGGTTCTGACCACCACCCAGCACAATGTTCCTAGATGTGTCATTTGTATGAAGGACTTCAGCGCACGAAAAACGCTAAAGCGTCACATAAAGAACTTCCATGAAGGGTTCGATCCGAACGAGTTGGCGGCAATTGGCTCCAGCAATAGACTGTTTATGGTGGACTGCAAGGATTGCTTGAAGCGGTTCACCGATGATGATctctacaaaatctatttagaTAATAAGGATGCGAGTGATGCTATAGTCTTCAAGTGCGAAACTTGCGCTGCGACTTACAACGTCATCGAGTTTGCGGTACTCagGTATCGAAGAATGGTAGCAACCCGCAATTTGAAACAAGCATCGTATGAGAGCGATGAGGCTGAAACGATTGAAACTGCACCTAAGTCGGATTCTTCCGATGTGGAGATAATTGACTGTGACGTTGAAATTATCGATTGTTAA
Protein Sequence: MAEFPEYICDYCSRSFTRKYNILTHITNCHINDSCFCVICEQKFGSPAGLQLHLSRGHNRLHQPNPECDLCGKIFTRKQNIISHLQTKHSIGTAPEVACEICNRKFTNTRNLRRHIRKLHNPTCTECGKVFRLKESLFAHMQSVHKVTVDDTNRCRLCERVYSCRKNLKRHLRTVHNVALPSDFICEHCSRVFCDKTGLDTHMSLHHKLENKNPHTHPCECGKVFNMEAELRQHVKSDHSFDDFYSYCKNYLIQTEKRKAEKLKRQSPVHTCEVCQEYFGSIFSLRIHMEEKHDLRYYTCNVCFAKFFSQEGIAQHQKECIPPDDVYRCSQCDKLFTEKLSLKFHVKVFHPQAKELSSPSSERSSSPVIVNNVLEDDVEERNELKCEYCYQLFKSKRNVKKHIEHVHRGMQRYKCPQCDTHFKESRNLRKHIRSKHPHSSTFPQCHLCRKRFESAQACKIHLKQAHSFVSDTFPCELCSLSYDSSESLSLHMRTKHENDDNLIKCEDCSLVFKGHDTFEKHKEKCQVLTTTQHNVPRCVICMKDFSARKTLKRHIKNFHEGFDPNELAAIGSSNRLFMVDCKDCLKRFTDDDLYKIYLDNKDASDAIVFKCETCAATYNVIEFAVLRYRRMVATRNLKQASYESDEAETIETAPKSDSSDVEIIDCDVEIIDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00277552;
90% Identity: iTF_00277552;
80% Identity: iTF_00277552;