Basic Information

Insect: Carposina sasakii
Gene Symbol: -
Assembly: GCA_014607495.2
Location: CP053149.1:12740470-12745670[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.12 9 7.6 4.9 2 22 187 207 186 207 0.96

2 15 3.1 2.4e+02 3.1 1.1 1 23 306 328 306 328 0.81

3 15 0.52 41 5.5 0.2 2 23 458 479 457 479 0.95

4 15 0.0025 0.19 12.8 1.6 2 23 553 574 552 574 0.97

5 15 0.035 2.7 9.3 0.6 1 23 582 604 582 604 0.95

6 15 0.11 8.3 7.7 3.4 1 23 641 663 641 663 0.95

7 15 0.00042 0.033 15.3 5.4 1 23 671 693 671 693 0.99

8 15 0.063 4.9 8.4 2.1 1 23 778 800 778 800 0.99

9 15 4.4 3.4e+02 2.6 2.4 1 19 854 872 854 876 0.89

10 15 1.9 1.5e+02 3.8 0.9 1 23 882 904 882 904 0.93

11 15 0.014 1.1 10.4 0.8 1 23 970 992 970 992 0.96

12 15 0.0083 0.64 11.2 1.8 1 23 998 1020 998 1020 0.96

13 15 0.0058 0.45 11.7 2.6 1 23 1111 1133 1111 1133 0.97

14 15 0.00015 0.011 16.7 1.4 1 23 1139 1161 1139 1161 0.99

15 15 0.7 54 5.1 3.2 1 23 1287 1309 1287 1309 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.12	9	7.6	4.9	2	22	187	207	186	207	0.96
2	15	3.1	2.4e+02	3.1	1.1	1	23	306	328	306	328	0.81
3	15	0.52	41	5.5	0.2	2	23	458	479	457	479	0.95
4	15	0.0025	0.19	12.8	1.6	2	23	553	574	552	574	0.97
5	15	0.035	2.7	9.3	0.6	1	23	582	604	582	604	0.95
6	15	0.11	8.3	7.7	3.4	1	23	641	663	641	663	0.95
7	15	0.00042	0.033	15.3	5.4	1	23	671	693	671	693	0.99
8	15	0.063	4.9	8.4	2.1	1	23	778	800	778	800	0.99
9	15	4.4	3.4e+02	2.6	2.4	1	19	854	872	854	876	0.89
10	15	1.9	1.5e+02	3.8	0.9	1	23	882	904	882	904	0.93
11	15	0.014	1.1	10.4	0.8	1	23	970	992	970	992	0.96
12	15	0.0083	0.64	11.2	1.8	1	23	998	1020	998	1020	0.96
13	15	0.0058	0.45	11.7	2.6	1	23	1111	1133	1111	1133	0.97
14	15	0.00015	0.011	16.7	1.4	1	23	1139	1161	1139	1161	0.99
15	15	0.7	54	5.1	3.2	1	23	1287	1309	1287	1309	0.97

Sequence Information

Coding Sequence: ATGGGACTACAAATTACAGAGAAGGAAATGGCTAATTCAAACAGCGATTCCAATGACGTAACCGTGGACATTGACAGTAAAGGTTCTGATGCGGTGCAGACCACGCATGAAGGGAACGGCTCCCAGACGAAGACTTCAGATGATGAGAGGAAGAGCAGGAAAATTCCTCGACCCATACCACAGCTAATACCTCTAGGTACCTCAACTCCTAATCAAAACAAAACAACAGGAGAACCTCCGGCGAAAAAGTTAAAAGAATCTCCACCCAATAATGAGTTAAACGAAAACCCAAAACAAATTGAAAATTTACCAGCAGACATTACCCTTATTCCTGTAAATAATGCAAAAGAAACAATAGGCCGAAAGAAAAATGAATCTTTCTTCGACAAGTTAAAAGAGCGGCTGTTGACTGAAACTGGAGAAAAAGGTTCTCTGAATTGTAAAAATTGTGGCTTTGAAAGTAAGTGTCTATCTGAGCATTCTGTACATGAAAAGAATTGTACAGTGCAACCAAACCGAACTACTAATAGTGTACTGCACCAACACTTGAGCTCAACTCGTTGCCAGAACTGCAGACACAGATGTAAATCAAGCGCAGACTTATTTAATCACATGAAAACTTGTCAGCAGCAGCGTTCTGAAAAAGATGACATCGAATGCATCAAGATGAAAAATCAGAAAAGTGAGGAAGCAAGTTCTTCAACTACAGATAAAGATATAGAAAAGCATCCAATGGAGAATGTTGTCTTTGTCTGGAATAATATTAATCAAGATACCTCAAAATTTGAAACGCCACTGGACATTAGTATTGAAGATCCTTCAACAGGATGTGTAAGTAGAAATTATGATAATGATATAACAGATGAACAAGACACTGTAAATTTATCTCCTGGCCAAGCCGGAGCCAAAAAAGTTTTTAAATGTCCTCATTGTCCATTTTGGGCAACAACAGCGTCAAGATTTCATGTACACATAGTGGGCCATCTAAATAAGAAACCGTTTGAATGCTCCTCCTGCCACTATAAGTCCAATTGGCGATGGGATATTACGAAACACATCAAGTTGAAATCGGCTAGAGGCGATTCACATAATAACGCAGAGGTATGGATGACTGATCCAACTGGTAAAAGGAATTATATGAAATACAATAAATTTTTGGCTACAACAATGCGTAACGAGAATGGGCTTAACGAATTCCATTATTTGGATCATAGAGCAGCCGCTGATGCTTCTTTGGAGATCACTGAACTAGTTGACGTCAACACAGCTGGCGCAGGAGACGTGCAGCCGCTAAATTTGCAGACCTTGCAGAGCGACGAGTCGGGAGCCGACAAATTTGAGGACAATAAGAAAAACAAGAAGACTCTATGGAAATGCAAAAAATGCAACTACAGAGATCCATCGAAAGAAGCCCTTTTGGAGCATGTTCGAGGACATTCCAAGCTGGAAACTATAGTAGACGACACTACGAAAGTTCCAAAACCAGAAATCCCAGACCCAGCAGACCTGGCCTACCGCTGTGGACACTGCAACCAACTATCTAATTGGAAGCATGTTATACAGCGTCATTGCCGTCTGAAGCACGGTGGCATAATAAAGGTAATAACAACAGTCAAACCGAAGCCTGACGAGACCCAACTTAACATTCAAAACGACACGTGCACGAAGTGCCCGTTTAAATCCAGTGACAGAAAAACATTGATGTCCCACATGCAAATGCATCAGCCATCTGTGAATTCCATATTCAAGTGTTACTTTTGCCCTTTCTTTGTGAAAAACGAAAGCGAATTGATACAACATCTCGTTCTCCACGGCGTTAATGATCCAGCAGATTATATATCTAAGGCAATGGGCTGTAAATCTCCTCTCCCGGAAGGTCAACCACTATCAACTTCACTTAATTCTAATTCCAATAAACGACACAAGTGCACCGAGTGCCCGTATGAAACGAACAGCAAGTCTCAATACATGTATCACGAACAATTTCACAAACACACTGAAAATACTCCATACAAATGCCAGGAATGCAACTACAGTGTATCGAAAAGACATCTGCTCCATCAGCACATGAGAGTGCATGGCATTTTTACAAGGAAGTGTGACGATGATCTAGATAACACATCATCTCATCACCATAAAAGTAGCGATGCTGAAAAGGTAGAGTATTCCATTAATCTAGATGAAATACCTTACGTTTGGGTTTCAGCTAAGAACGAATTCCATAAAATGTATAAATGTCGTTACTGCTCATATGTGAATTCACAGGAATGTAGAATACCAACTCATGAAAAAATACACTGTACGGTATTTGAAAACAGTGATATCACTATTTATAAATGTTTGGAATGTAAATTCACGTGTGATAGCGCTTGGAAGCTAGCAGATCATTCAAAGACTCACGCTGAAATATACGGTCGCATATATTGTCCTGTTGAATTTGACATCACAGATGAAGAACAGGTTATTAAACTACGGAAAGTTAATGAACTTGAAAAGGCCAATATGAGTGAAGACACTTCCAAAGACGGTGGTAGTGAAAATGTAGAAATAAAAGTGTTATATTTTTGTCACAAATGTCCTGCACGTTTCTTTGCCGATAGCGAATTAAGACTTCACGACAAATTCCACGATTTGGCATCGACACACAAGTGTATATATTGTGAGTATTCCGTAAATGAAGAGGACCAATTAACTGAACATTTATTTTTGCATTCTGATGAATATAACACCAAGACGAAGATGCTTAAATTTCTCCACAATAGACACCCTGCGCACAGTGGCCCACAATTAGAAATCACTCGAAGTCCAGATACAGCTGAAGTCAAATGGATTGTTTCGTATCCTAGAAAAAACTATGAAACTGGTGAAAATAATAAAAAATGTGAATCCAAACATGTGCCAAAGCAATACTTTTGCAAAGAATGTCCTGCCAAGTTTTTCAAGAGCTCCGCACTCAGCTATCACGCGAATTTACATGGCGGAGAAGGAGATCATAAATGCAAAAAATGTAGTTATACTGTAAAAAATGTCGGAAACTTAGCTAAGCACGAACTATTGCATGAAGATGAAGGAAAGGCTTCTAATTGTGATTACGAATCAGGGGAAGACAACGATTTTAAACATATTCCATTGTCGGGAACTGATTTATTCCAAAGGAAGACTGAAGCACAAAAGAAGGTTTTGTCAGATAAGGACAATCAGTTTGTCAAACCTAATGATCATTTCCCTCCTATATTACACGCTGACCCTCAGTTTGGCTATTTGATGCATGGTAATCCTGAATTTATATATCCCACTTATTTAAAAAATGGTCGTCAAAGAGAAAAACGTTACAAGTGCCATAAATGCCCATCTGCTTTTGAAAAGCGCGAACAATACAAAATCCACTTATCATTACACGGCTCTAAACAAAGATATAAGTGTGAACTTTGCGATTACTCTGTCAAATATTATGCTAATTATGTGCAACATATGAGGAAACATCAAATGAATGACGCAGCTTTAGCCGAGAGGAATAAACGCAGCGGAGAAGTAGGTGATTCTAACACCGTCAATGATAATAAAGAAGACAGCGGCGTAAGCAGTATTAAATTAGCAATCAAAACAATACCAAAAGGAATTCCTAAAAGTGATTTTCAACAATTCTCAATTAGTGATCAGCAGACACTGCGCCTTTTACAACGTCGACGTTCTATGTCAAATATTGGAAAAGATGCCAACGCATCAGATTCCACACCCGCTAAAGAACGAAAGCTGCATTTATGTCTTCTATGCCCGTATACAAATCAACGTCTGGACTCTTTGAGCAATCACTATAAAAGACATGATGATACCGATGCTTACAATCAAATTCCCAGTCATAAATGTTCATTTTGTGATTTAGCTGTACTACAGTCTCACCTTCTAAAGGATCATTTAAAATCACACTTCAATTATCCGAAACACCTTATACCTGAATGTTACGTGGCAAATGAAGGTGTAAAGTTTACTATAACAAAATTGGACGCTGATGACGAAGTGGAATCTGAACTCACAATAGATATGGACAGTAAAAACTTTTTAAGTAAAGACGAAAAAATATATGTTAAAATTAAAACTGGAGAAATTGCCGTAGAGTAA
Protein Sequence: MGLQITEKEMANSNSDSNDVTVDIDSKGSDAVQTTHEGNGSQTKTSDDERKSRKIPRPIPQLIPLGTSTPNQNKTTGEPPAKKLKESPPNNELNENPKQIENLPADITLIPVNNAKETIGRKKNESFFDKLKERLLTETGEKGSLNCKNCGFESKCLSEHSVHEKNCTVQPNRTTNSVLHQHLSSTRCQNCRHRCKSSADLFNHMKTCQQQRSEKDDIECIKMKNQKSEEASSSTTDKDIEKHPMENVVFVWNNINQDTSKFETPLDISIEDPSTGCVSRNYDNDITDEQDTVNLSPGQAGAKKVFKCPHCPFWATTASRFHVHIVGHLNKKPFECSSCHYKSNWRWDITKHIKLKSARGDSHNNAEVWMTDPTGKRNYMKYNKFLATTMRNENGLNEFHYLDHRAAADASLEITELVDVNTAGAGDVQPLNLQTLQSDESGADKFEDNKKNKKTLWKCKKCNYRDPSKEALLEHVRGHSKLETIVDDTTKVPKPEIPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHGGIIKVITTVKPKPDETQLNIQNDTCTKCPFKSSDRKTLMSHMQMHQPSVNSIFKCYFCPFFVKNESELIQHLVLHGVNDPADYISKAMGCKSPLPEGQPLSTSLNSNSNKRHKCTECPYETNSKSQYMYHEQFHKHTENTPYKCQECNYSVSKRHLLHQHMRVHGIFTRKCDDDLDNTSSHHHKSSDAEKVEYSINLDEIPYVWVSAKNEFHKMYKCRYCSYVNSQECRIPTHEKIHCTVFENSDITIYKCLECKFTCDSAWKLADHSKTHAEIYGRIYCPVEFDITDEEQVIKLRKVNELEKANMSEDTSKDGGSENVEIKVLYFCHKCPARFFADSELRLHDKFHDLASTHKCIYCEYSVNEEDQLTEHLFLHSDEYNTKTKMLKFLHNRHPAHSGPQLEITRSPDTAEVKWIVSYPRKNYETGENNKKCESKHVPKQYFCKECPAKFFKSSALSYHANLHGGEGDHKCKKCSYTVKNVGNLAKHELLHEDEGKASNCDYESGEDNDFKHIPLSGTDLFQRKTEAQKKVLSDKDNQFVKPNDHFPPILHADPQFGYLMHGNPEFIYPTYLKNGRQREKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDAALAERNKRSGEVGDSNTVNDNKEDSGVSSIKLAIKTIPKGIPKSDFQQFSISDQQTLRLLQRRRSMSNIGKDANASDSTPAKERKLHLCLLCPYTNQRLDSLSNHYKRHDDTDAYNQIPSHKCSFCDLAVLQSHLLKDHLKSHFNYPKHLIPECYVANEGVKFTITKLDADDEVESELTIDMDSKNFLSKDEKIYVKIKTGEIAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -