Basic Information

Gene Symbol
znf711
Assembly
GCA_014607495.2
Location
CP053158.1:12769940-12788564[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 3.7 2.9e+02 2.9 0.4 2 23 6 27 5 27 0.95
2 13 0.0012 0.096 13.8 0.1 2 23 1023 1045 1023 1045 0.95
3 13 0.00068 0.053 14.6 0.4 2 23 1144 1165 1143 1165 0.97
4 13 0.00014 0.011 16.7 2.5 1 23 1171 1193 1171 1193 0.98
5 13 0.0093 0.72 11.1 1.6 2 23 1200 1221 1199 1222 0.95
6 13 0.32 25 6.2 1.8 5 23 1235 1253 1233 1253 0.97
7 13 0.02 1.6 10.0 1.1 3 23 1260 1281 1259 1281 0.96
8 13 0.006 0.46 11.7 0.1 2 23 1295 1315 1294 1315 0.96
9 13 3.6e-05 0.0028 18.6 0.8 1 20 1321 1340 1321 1343 0.91
10 13 0.011 0.88 10.8 3.0 1 23 1351 1373 1351 1373 0.97
11 13 0.011 0.84 10.8 7.8 1 23 1379 1401 1379 1401 0.98
12 13 2.9e-05 0.0022 18.9 1.1 1 23 1407 1431 1407 1431 0.98
13 13 0.0011 0.084 14.0 5.1 1 23 1437 1459 1437 1460 0.95

Sequence Information

Coding Sequence
ATGGAACAACAAATGCAGTGTCCAGTATGCACACTATATCTGCACAATGGAATGTCATTGGAGTCTCATCTTGACACGCATCCTAAAGATCAAGTCATTAAAGCACTATGTTCCTTGTCATCTAAAAGTAATGCCAGTTTTGGAAGTAGGACAGCCACTCCATCTGAGCGGTCCTATAGAAGTAGGTCAAGGACTCCGGCCACTGAGGATGGGGTAAGGTGGTCGCACCGCACTCCAGACCCTGAGCGCTACTGGCACCGCACCCCCAGCCACACCCCCAGCCGGACCCCCAGCAGGACCCCCAGTCGAACACCAAAGCTGTCACATGCATCCAGGACTTGTACACCAGATGTTAGAGTAGGTGATATCAGTTATGACAATAATTGTATCAACTCAAATCAATACTCTGACACTCAATTTATAATGAAGTCAGATAAAATGCAGCAAACCTATTCTGCTGCTCCATCTGACTCCAATTATGACCATCCTCCTTACAATATGTATTACCATGATCAAAATGAAGACAGAGAAATAAAATATTCTCGTAGTGCTGAGTATACTGCAATGGATAACCCAAATAATTTATTTGGCTACAATATATCAGCTTTAGTACCTGGTGTGAAAGTTCAGACTGCTATTGTACCACCAGCTTCCAAAAGGGGGAATGAAATTGTGAAAGTACTGCCTAAACCAAACAGTATGATTGCAAAGGCCAACATAGCTGGAGTGCAATACATATCTCCTAATGTGAAACCAATGCATGTTGTGCTGCCCACTGCACCAACATTTGTGCAGAAAAATATACAAAATAGCATGATAGTGTCAGGAGGGCTGCCACCAACACAGATCCTAGATAACAAAGCCACAGCCACTCCTTTGACGGCAAATCATTTTAACCAAATAACTTCAGGTCCATTCACTCCTGGAACCACTGTTGTAACACAAAATTCTCAGATTATTTACAGAGAAATGGTCCACAACATAGATGGAAAGCCATTCATCTCCAGCATGCCTACTGTATTGAATGGGGAGAATGTCACAAATATGGCACAAACAAGCTCAATGTATCAAAATGTGATGGTGGTAGATCAATTTGGTAATACTTCATGTATGTATACACCCCAACAAATTGTATCCAAACCAACTATATATCCTGATAGTATACCAACAGTTTCAACTAGCTTTGAGAAATCCATTCCTGCAGTGAATGATCCTAGTAAAACCTTGATTATTGAAGTTGGTCCAATTGTACCATCAGTGTCAGTTACAGCAACTGAAAACCATGCTAATTCTTTAGAGGTACTTGAGACTAATACAACAAAATCAAATAATAATGATCAAATTATAGATAAACCAGAGCCTAGAGTGGACACTCCTGGTTCCCTAAAAGGGTTAAAGATATTGAGCAATATCAAGGTTGAAGTACCAGTTCAGCACAACAAAAACATGTTAAATACTGTAATGGATCTCACTGGGCCTAATGAAAATGACTATCCTGTTCGATCAATATCACCGGAGAAGATATTGCCTGATTTAGACAGCAACCAGTCCATGTCTAATGATAGTATCCATCCATCACTTATTAGTGGAGAGAGTACTGTCTCCCATTCCTTTTCTGTGATTAAAAATGTTGGCAATCCACCTGCTTATAAAGAACAACCAATTAAACCAATGGTTATAGATAATAAAATAGATACAGAGTTCTCAGACAGTTGTCCAGTTCCAGATTTAATATGTAATGAAAAGCCCTCTATATCCCCTTGTAGTGAATTATCAGAAAATGGTGAAAATTCAACTGAACACACTCCCCCTTCTCCTAAACCTCTCATCAATGAAGAGAGTCCTATGCATATCATCGAAATTAGTTCAGAAAAGACAAATGTTAAAGGTTATAAAAATAGTACTCTAAGATTGAACAATATTTATGTGAAAAAGCACAAAAAAATATTACAAATTAAAAATTCCAAGATTTTCCCTACTCCTAGCACCTCAACATGTGCTGAAATTGAACCTATACCTTCATCATCAAAGTGCAAGTCTCCTAAAAGGCACAGTGCCAGTAGAAGGAGTTTGGAACCTTGCTCCAGGGATAGAATACAGGATCCCTCCATAACAGGTGTATTTTCCCATACAGAAAAAAGAGCAATAGACAATTTACAGCCACTTAGTCTGACCAAAGGTACATTACAGACCGTGTCTGTTGAGAAGATCATGGACAATAACTGCAAAGACTGTAATCACATTGAAGAAAGTAGCCATAATGATTTCAACGCTCACAGGGATTCAATGGACACAAAAACAGATGTTGCCACCACAAAAAAATCTATAGACTTGCCTAAAGTTGATGTTAAGGAAGAAATTAATACAAGCAATGAAGCAGAATTCAGCAATGAGAACAGTCAAACAGATTGCGTGCTCACCCCTTTGGAGACTCTCCGGCCTATCAATGTTATCACCTATGGTAGCATGGCTCCGTCGGATTTTGACGACGAATCAAACCACAGGGAGCTTCTAGACTTAGAGGTAGCATCAAAGAACAAGCAATTTGTGAACATGATGAACGAAAATTATTTCGGAGACAACATCTACGCGGACTATTTTACGCCGGACCGAGTGGAGTCGTTCGACGCGGATAGAGAGGCTTCATTCGTGAAAGAGGCGGCGAAAGAGTACAACATGTGGGGGGAGAGTTCACAGAAGGATTCAGAGTTTGTGCTGCCGAATTTTATCCACGACGGTTATAAGGAGGGCGGGTCGGGGTACGCAGTGGTGGACGTGAACATGGAGGCGTGTGAGAGCAAGGCGGATGTGCTGAGCTCTTCCCGCAGCGAGGGAGAGCTGGTCAACATCCGCGCGGACGAGCGCATGCCACCGCGAGGAGAACTCAGCGGACAGGAGAGCAATGGCGACATGGACTCTGCTTGGAGTGGGATGTACCCGGACGCGCCGCCTGAGCCCTACGACCTCATCGCTCGCGAGAGCTGGATCTCGGACGGCTCGGACGTCGACCCTAATGAGAAAAGGAACGCCATAGAGGACGAGTTGTTTCCAAAATCGCGCGCGAACACGTGTTCGCAGTGCGGCGGTTCGTTCGCAAACGCTCGCGAGCTGCGCGCGCACCGTGCTCGCGAGCACGCGCCGGCGCGCTCTTACCGTCGACTGGTCGCCGAACGAGCTATTAAGAAGGAGGAAAAGCCGGATATAGGGCCCATACCCAGTAACCTGTTAGTGGACTCTAAAGATGCCATCGCGACGACTATGCTGCAGGTGTACGACGCTCTGGCAGACGCCAAGCCCAAGCTGGAGCGAGACACGCCCGAGACACGCCCCGAGACTCGCCGCCGCAAGCGGGACTTCGTGTGCCCCACGTGCAAGGTGGACCAGGAGAACACGGTGGCGTTCCACGAGCACCTGAAGGTCCACCCGCTGGAGTGCCTGACGTGCGGCAAGTTCTTCCTGCGCCGGGCCAACCTGGCGCTGCACATCAAGACGCATCTGGGCATCAAGAACTACAAATGCGAGGTCTGCGAAAAGCGCTTCGTGACGCGTCAGAAGCTGATGGAGCATCACAACGTACACACGGGACGAGCGCCCGTCAAGTGTACCGTCTGCGGGGACGGCTTCCGGCGCTACTCTAACATGGTGCAGCACCGTGACCGCCACCACTTCCAAAAGAAGCCCAAAGTGCGCGACTTTGTCTGCCACTGCGGCAGCGTGTTCCACTCGCGCGCCAAGCTGGCCTGGCACCAGGAGACGCACGACCCTCGGCCCAAGGCGTGCCTCTACTGCAGCGACAAGTTTGTGCACGCCGCGAGCCTCACGCGCCACGTGCGACGCTCGCACAACGAGCACTTCCTCGGAGAGGGCAAGGGCGAGAACGTGCCGTGCCCGGTCTGCAAGCAGGTGTACCTCCGCAGTAACCTGCGCGCTCACCTCGCGACCCACACCGGGGAACGACCCTTCCCCTGCGTCATCTGCAACAAGAGCTTTACCACCAAGTGGAACCTCAAGCTGCATCGCTGGACGCACATGTCGCGCTCCGCCAAGCCCTACAAATGCACCCTGTGCAAGGGCGCCTTCATCCGACACTCGGAATTCGTTTCGCACATGCACGCGCACAAATCCGTGCGCCCCTACACGTGCAACTACTGCGGCTGCCAGTTCATCAGGAAGTATAACTGTAAGAAACATGTCAGGGAACACGAAATGCCGAAGAAGTACGTGTGCAAAGTGCCCGAGTGCGGCAAAATGTTTCACAGAAGCAACTATCTGTCGGAGCACATGAAGGTGCATAGCGGTGTTCGTCCGTTTTCTTGCAATATTTGCGGTAAAACGTCGAGTAATAAGTCCAATCACAACAAACATGTGAAGATTCATCATGCCCGCGAGCCTATAGCTACTGAGTCGTAG
Protein Sequence
MEQQMQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCSLSSKSNASFGSRTATPSERSYRSRSRTPATEDGVRWSHRTPDPERYWHRTPSHTPSRTPSRTPSRTPKLSHASRTCTPDVRVGDISYDNNCINSNQYSDTQFIMKSDKMQQTYSAAPSDSNYDHPPYNMYYHDQNEDREIKYSRSAEYTAMDNPNNLFGYNISALVPGVKVQTAIVPPASKRGNEIVKVLPKPNSMIAKANIAGVQYISPNVKPMHVVLPTAPTFVQKNIQNSMIVSGGLPPTQILDNKATATPLTANHFNQITSGPFTPGTTVVTQNSQIIYREMVHNIDGKPFISSMPTVLNGENVTNMAQTSSMYQNVMVVDQFGNTSCMYTPQQIVSKPTIYPDSIPTVSTSFEKSIPAVNDPSKTLIIEVGPIVPSVSVTATENHANSLEVLETNTTKSNNNDQIIDKPEPRVDTPGSLKGLKILSNIKVEVPVQHNKNMLNTVMDLTGPNENDYPVRSISPEKILPDLDSNQSMSNDSIHPSLISGESTVSHSFSVIKNVGNPPAYKEQPIKPMVIDNKIDTEFSDSCPVPDLICNEKPSISPCSELSENGENSTEHTPPSPKPLINEESPMHIIEISSEKTNVKGYKNSTLRLNNIYVKKHKKILQIKNSKIFPTPSTSTCAEIEPIPSSSKCKSPKRHSASRRSLEPCSRDRIQDPSITGVFSHTEKRAIDNLQPLSLTKGTLQTVSVEKIMDNNCKDCNHIEESSHNDFNAHRDSMDTKTDVATTKKSIDLPKVDVKEEINTSNEAEFSNENSQTDCVLTPLETLRPINVITYGSMAPSDFDDESNHRELLDLEVASKNKQFVNMMNENYFGDNIYADYFTPDRVESFDADREASFVKEAAKEYNMWGESSQKDSEFVLPNFIHDGYKEGGSGYAVVDVNMEACESKADVLSSSRSEGELVNIRADERMPPRGELSGQESNGDMDSAWSGMYPDAPPEPYDLIARESWISDGSDVDPNEKRNAIEDELFPKSRANTCSQCGGSFANARELRAHRAREHAPARSYRRLVAERAIKKEEKPDIGPIPSNLLVDSKDAIATTMLQVYDALADAKPKLERDTPETRPETRRRKRDFVCPTCKVDQENTVAFHEHLKVHPLECLTCGKFFLRRANLALHIKTHLGIKNYKCEVCEKRFVTRQKLMEHHNVHTGRAPVKCTVCGDGFRRYSNMVQHRDRHHFQKKPKVRDFVCHCGSVFHSRAKLAWHQETHDPRPKACLYCSDKFVHAASLTRHVRRSHNEHFLGEGKGENVPCPVCKQVYLRSNLRAHLATHTGERPFPCVICNKSFTTKWNLKLHRWTHMSRSAKPYKCTLCKGAFIRHSEFVSHMHAHKSVRPYTCNYCGCQFIRKYNCKKHVREHEMPKKYVCKVPECGKMFHRSNYLSEHMKVHSGVRPFSCNICGKTSSNKSNHNKHVKIHHAREPIATES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-