Csas004302.1
Basic Information
- Insect
- Carposina sasakii
- Gene Symbol
- ZNF131
- Assembly
- GCA_014607495.2
- Location
- CP053172.1:5041425-5045073[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0013 0.097 13.8 0.9 2 21 114 133 113 134 0.93 2 18 0.014 1.1 10.5 0.0 3 23 195 215 193 215 0.91 3 18 0.36 28 6.0 1.9 1 13 219 231 219 233 0.89 4 18 0.00037 0.029 15.5 4.5 1 23 251 274 251 274 0.92 5 18 0.00023 0.018 16.1 0.6 1 23 280 302 280 302 0.98 6 18 2.4 1.9e+02 3.5 1.9 5 23 312 330 310 330 0.96 7 18 8.9 6.9e+02 1.7 0.3 1 23 336 359 336 359 0.79 8 18 0.0017 0.13 13.4 0.2 3 23 369 390 368 390 0.97 9 18 0.00071 0.055 14.6 0.6 2 21 503 522 502 523 0.94 10 18 8 6.2e+02 1.8 0.0 3 23 530 551 529 551 0.90 11 18 0.00089 0.07 14.2 0.0 3 23 558 579 557 579 0.95 12 18 0.0011 0.085 14.0 1.0 3 23 586 606 584 606 0.94 13 18 2.5 1.9e+02 3.4 1.1 2 20 610 628 610 630 0.91 14 18 0.00047 0.037 15.1 2.0 1 23 656 679 656 679 0.96 15 18 0.0045 0.35 12.0 1.3 1 23 685 707 685 707 0.95 16 18 3.6 2.8e+02 2.9 0.1 3 23 715 735 713 735 0.96 17 18 0.24 18 6.6 3.9 1 23 741 764 741 764 0.92 18 18 0.00032 0.025 15.6 0.3 2 23 771 793 770 793 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAGGGCTTGCCAGCGCTGGCTTGCATGCGCTGCTACTCGGACGCCCTCGTCGTGTTCAGGTTCCGTCAACTCTGCCAGGAGTCGCTCGGGCACTGGGCGCACGCCATGTCCACTCTAGCAGACATCCTCGAACCCTCAGAGCACGACAGGGCGTATTACCTGTTCTACAGCCTCGAAGGAAACACGCTTGTCCGAGATCAACGAGAAAGAGTCGTTAACAAGGCTCAGTTGGTACGGAGACTGAACACGTCCACCGAGAAATCAAGCTTGCCAGTAACGCCCAGAGTGAAGCGCCGTAAACGTAAAAAAGTTCCACTGGCAAGGACTAGATGTCGCTGTCCGGATTGCAGGAAGCAGTTTGATAGTGTGCGCGAGTTGAAGGCGCATTTGAACAGTAAGGCACGGCAGGCTTGTACGGTCTGCTGCAAAGTCCTCGACAGTAAAAAACTGATCGAACACTTGAAGAGCGATCACAGTTTGACGCCAGTTCACTGCCAACTCTGTTATGAGATATTTGAGGATGTACGCGAGTGTACTGTGCACATGGATTTAGTTCACTTGGAAAATAGTCACGCTTGTATAATCTGCGGCGAAGTGTTTGACAGCGAGGTAGCCCTCACCGCTCATGTGGAATCGCACGGGCAGCAGTTCATCTGCGATTCGTGCGGAAAGTCGTTTGCGAACCGAAACTGCAGTCGATTCCATCAGACGCGATGCAGAAAAACCGTACCAACAAACGAGGGCTACATCTGTGATTACTGTCACCACAAGTACAATCGTAAGTCGTCGCTAAAAGCACATATTGTGCAGAAGCATTTAAAAGTGCTCCCATACGTGTGCAAAACTTGCGGGAAGCGCGCATCGACATTACCGCATCTGCGCGTGCATGAGGCCACACACTCGCAGTTTAGAGAGATATTTACGTGCCACTGTGGATCTAGGTTCCGTTCTGAGCTCGGCTACAGCTTGCACCAGCGGATACATACAGGGGAGAAGCCGTACGCTTGTGAGGTATGCGGCGATAGGTTTCTCTCCTCGTCCCGCCGCGCCGATCACGTCAAACGTCGACATCGGGGACAGCATGAAATGCCCCACGGCTGTGAGTTGTGCCCGTCGCGGTTCATCAGACCGTTTGAGCTGAAGAAACACTACAAGATTGTACACTCCAAGGTTGTTGAGATGAACGTCGAAGGCCTGTGTCCGCCGTCAGTGTGTCGTTCGTGCACCGAATCGGTGGTGCTCGCGAACGAATTCCGGCAACTAGTGTCTCGTTCTGCGTCGCTGTGGGCCGGAGCCACCGCGGCGTTTACCGCCTTACCGGAGGAGTCCGCGCGCGCCGTCCACTCCGCCTGCGCGGTGTTCGACCCCACACTCGATACTTTGCAGGTCGTGGCTGACGTCGGCACCTCGCCCAGACAGGTCGTACGCACTCTAAGAGAGCGCACCCGCAACAACGTCATCCCGAAGCGGCAGAAACACACCCGCGTCGGCCCCTCCTGCCGCTGCCCGGATTGCGACAAAGAGTTCCTCAGCCCGTACTACTTAAACGTCCATTTGCGTAATAGTAACCAGAAGGAGGCGTGTTACATGTGCGGTGAAGTGATAATCCGCGGCCGGCCGCTTATGGAGCATTTGCAGGCGATCCATGGGGAAAAGGCGATTCTGTGCGAGGAGTGTCCGCTAGTGTTTACCAATCCGGAGCTGTTTGCGCGCCACGTGAAGGCGACGCATCGGGCGGGTGCGCGCTGCTGCCGCGAGTGTGGTCGAGCGTTCCCGCGCCGCGCGTCGTACGAGCTGCACGCGCAAATGCACGTGGTGCGCACGTGCCGGGCGTGCGAACGCCAGTTTGCCAACCGCGCCTGTTACCGCGAGCACCGAGCGCGCTGCGAGCCGGACGCCAAGCCCCCCGCGTCCAGCATGCCTCGCAGCCGGCGCTCCAACAACCGCGACCCGGCCACATACATCTGCGACTTCTGCCAGAAGACCTACCATTCCCGGCCGCAGCTAAAGAACCACATAAAGTGGATCCACATGGACGTGCGCCCGCATCAGTGCCAGTGGTGTTCCAAACGGTTCTATACGCCGACGCGGTTGGCGGAGCACACGGTGGTGCACACTCGCGAGCGGAGGTTCGGTTGCGATTTGTGCGGGGCGCGTCTAGTGTCGCGGATGGCCGCGGTGTATCACCGGAGACGGCATACGGGCGAGAAGCCGCACAAGTGCGAGACTTGTGGCGAGCGGTTCATCTCGCACTCGCGCAAGGTCGAGCACGCCAAGCGCAGGCACAACGTGGGCCCCAAGGTTCCGTGTCTCCAGTGCAGTGCCACCTTCGCTCGCCGATTCGACCTGCGGAAACATATGGAACGCGCGCATACGGATAAAGGGCCGAAAGTGGGTAGAGACTACACGCCCGTGGAGGCCTAG
- Protein Sequence
- MEEGLPALACMRCYSDALVVFRFRQLCQESLGHWAHAMSTLADILEPSEHDRAYYLFYSLEGNTLVRDQRERVVNKAQLVRRLNTSTEKSSLPVTPRVKRRKRKKVPLARTRCRCPDCRKQFDSVRELKAHLNSKARQACTVCCKVLDSKKLIEHLKSDHSLTPVHCQLCYEIFEDVRECTVHMDLVHLENSHACIICGEVFDSEVALTAHVESHGQQFICDSCGKSFANRNCSRFHQTRCRKTVPTNEGYICDYCHHKYNRKSSLKAHIVQKHLKVLPYVCKTCGKRASTLPHLRVHEATHSQFREIFTCHCGSRFRSELGYSLHQRIHTGEKPYACEVCGDRFLSSSRRADHVKRRHRGQHEMPHGCELCPSRFIRPFELKKHYKIVHSKVVEMNVEGLCPPSVCRSCTESVVLANEFRQLVSRSASLWAGATAAFTALPEESARAVHSACAVFDPTLDTLQVVADVGTSPRQVVRTLRERTRNNVIPKRQKHTRVGPSCRCPDCDKEFLSPYYLNVHLRNSNQKEACYMCGEVIIRGRPLMEHLQAIHGEKAILCEECPLVFTNPELFARHVKATHRAGARCCRECGRAFPRRASYELHAQMHVVRTCRACERQFANRACYREHRARCEPDAKPPASSMPRSRRSNNRDPATYICDFCQKTYHSRPQLKNHIKWIHMDVRPHQCQWCSKRFYTPTRLAEHTVVHTRERRFGCDLCGARLVSRMAAVYHRRRHTGEKPHKCETCGERFISHSRKVEHAKRRHNVGPKVPCLQCSATFARRFDLRKHMERAHTDKGPKVGRDYTPVEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -