Basic Information

Insect: Carposina sasakii
Gene Symbol: -
Assembly: GCA_014607495.2
Location: CP053172.1:7487078-7492355[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.018 1.4 10.2 0.3 1 21 84 104 84 105 0.95

2 32 2.9 2.2e+02 3.2 0.2 3 23 134 154 133 154 0.95

3 32 0.0096 0.74 11.0 0.4 2 23 177 198 176 198 0.97

4 32 0.013 1 10.5 0.1 1 23 202 224 202 224 0.96

5 32 0.03 2.4 9.4 0.4 1 21 229 249 229 252 0.78

6 32 0.011 0.85 10.8 2.3 1 23 258 281 258 281 0.95

7 32 0.0017 0.13 13.4 1.2 1 23 288 311 288 311 0.98

8 32 1.4e-05 0.0011 20.0 3.0 1 23 318 340 318 340 0.97

9 32 0.0052 0.4 11.8 0.2 1 23 417 440 417 440 0.97

10 32 0.97 75 4.7 0.5 2 23 467 489 466 489 0.93

11 32 0.00012 0.0094 17.0 0.1 1 23 511 533 511 533 0.99

12 32 0.0042 0.33 12.1 0.1 1 23 537 559 537 559 0.98

13 32 0.25 19 6.5 0.1 1 21 564 584 564 587 0.77

14 32 0.039 3 9.1 2.3 1 23 593 616 593 616 0.92

15 32 0.27 21 6.5 0.1 1 13 623 635 623 637 0.90

16 32 0.079 6.1 8.1 0.1 1 23 688 710 688 710 0.97

17 32 0.032 2.5 9.3 0.1 2 23 736 758 735 758 0.95

18 32 6.5 5.1e+02 2.1 1.9 2 23 781 802 780 802 0.94

19 32 0.00011 0.0084 17.1 0.9 1 23 806 828 806 828 0.98

20 32 0.016 1.3 10.3 0.3 1 23 833 856 833 856 0.93

21 32 0.011 0.88 10.8 1.2 1 23 862 885 862 885 0.96

22 32 6.1 4.8e+02 2.2 0.2 1 12 891 902 891 904 0.89

23 32 0.032 2.5 9.4 0.1 1 23 943 965 943 965 0.94

24 32 1.7 1.4e+02 3.9 0.3 2 23 991 1013 990 1013 0.91

25 32 0.059 4.6 8.5 5.9 1 23 1035 1057 1035 1057 0.98

26 32 0.00057 0.044 14.9 0.9 3 23 1063 1083 1062 1083 0.97

27 32 0.16 12 7.2 2.3 1 23 1090 1113 1090 1113 0.88

28 32 0.00014 0.011 16.8 2.4 1 23 1118 1141 1118 1141 0.97

29 32 0.17 13 7.1 4.8 1 23 1147 1170 1147 1170 0.97

30 32 4e-05 0.0031 18.5 0.3 1 23 1176 1198 1176 1198 0.97

31 32 2.8e-06 0.00022 22.1 0.7 1 23 1204 1226 1204 1226 0.99

32 32 0.0017 0.13 13.3 5.2 1 23 1232 1254 1232 1255 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.018	1.4	10.2	0.3	1	21	84	104	84	105	0.95
2	32	2.9	2.2e+02	3.2	0.2	3	23	134	154	133	154	0.95
3	32	0.0096	0.74	11.0	0.4	2	23	177	198	176	198	0.97
4	32	0.013	1	10.5	0.1	1	23	202	224	202	224	0.96
5	32	0.03	2.4	9.4	0.4	1	21	229	249	229	252	0.78
6	32	0.011	0.85	10.8	2.3	1	23	258	281	258	281	0.95
7	32	0.0017	0.13	13.4	1.2	1	23	288	311	288	311	0.98
8	32	1.4e-05	0.0011	20.0	3.0	1	23	318	340	318	340	0.97
9	32	0.0052	0.4	11.8	0.2	1	23	417	440	417	440	0.97
10	32	0.97	75	4.7	0.5	2	23	467	489	466	489	0.93
11	32	0.00012	0.0094	17.0	0.1	1	23	511	533	511	533	0.99
12	32	0.0042	0.33	12.1	0.1	1	23	537	559	537	559	0.98
13	32	0.25	19	6.5	0.1	1	21	564	584	564	587	0.77
14	32	0.039	3	9.1	2.3	1	23	593	616	593	616	0.92
15	32	0.27	21	6.5	0.1	1	13	623	635	623	637	0.90
16	32	0.079	6.1	8.1	0.1	1	23	688	710	688	710	0.97
17	32	0.032	2.5	9.3	0.1	2	23	736	758	735	758	0.95
18	32	6.5	5.1e+02	2.1	1.9	2	23	781	802	780	802	0.94
19	32	0.00011	0.0084	17.1	0.9	1	23	806	828	806	828	0.98
20	32	0.016	1.3	10.3	0.3	1	23	833	856	833	856	0.93
21	32	0.011	0.88	10.8	1.2	1	23	862	885	862	885	0.96
22	32	6.1	4.8e+02	2.2	0.2	1	12	891	902	891	904	0.89
23	32	0.032	2.5	9.4	0.1	1	23	943	965	943	965	0.94
24	32	1.7	1.4e+02	3.9	0.3	2	23	991	1013	990	1013	0.91
25	32	0.059	4.6	8.5	5.9	1	23	1035	1057	1035	1057	0.98
26	32	0.00057	0.044	14.9	0.9	3	23	1063	1083	1062	1083	0.97
27	32	0.16	12	7.2	2.3	1	23	1090	1113	1090	1113	0.88
28	32	0.00014	0.011	16.8	2.4	1	23	1118	1141	1118	1141	0.97
29	32	0.17	13	7.1	4.8	1	23	1147	1170	1147	1170	0.97
30	32	4e-05	0.0031	18.5	0.3	1	23	1176	1198	1176	1198	0.97
31	32	2.8e-06	0.00022	22.1	0.7	1	23	1204	1226	1204	1226	0.99
32	32	0.0017	0.13	13.3	5.2	1	23	1232	1254	1232	1255	0.96

Sequence Information

Coding Sequence: ATGTATTATTTATTAGCTGTTCCCCGCAACCCCGTGCACGTAGAGTCGAGTGGACAACAAGAAATATCGGACAAAGAGCCAGTGATTAAAACTTGTGCTGAAAGTTCAGCCGTTGAACCATCAGTAGAAAAAGAAAAACGGAAATACCAAAGGACTGCACGGGCTGAGGCTCGCTTTATTACCAAGAATAACGCCAGCTCGATTCTGCAGTGCTGGTCAGTCTGCCCGTTTAGATGGAAAAGAAATAGGTTCAAATGTGGCTACTGCGAAGAAAACTTCATAGATTGCAATCCTCTTAGAGAACACGTTAGAGTATGCTCCTTCCAACATAGTGTTAAAGATATTTACAGCAAATTCAAAGAGATGTCTCTCATCAACGTTGACGTTACAAATGCACTGTGTCGGTATTGTGGGATGCCCTCCAATGATGTTAAGGACATGCGTGAGCATGTAACACAACATGGTTTCGCTTTCGACGCTAATCATCCCGATGGGGTACTTCCCTTTTCTCTGGACAAGGATTTATGGCAGTGCGTTATATGTCAGGAGAAATTCAACAACTTTTTGAAACTTTACGAACATATGAATGTACATTATCAGCATTATATTTGCGCGACTTGTGGCAAAGGATACATGACAGCGCCTCGATTGAGGAAGCATGCCGAATCTCACGTGTCTGGTACGTTTCCGTGTAATGAGTGCGGAAGGGTGTTCAATATGAGAGCAGCAAGAGATCACCATAAAGCCAACGCTCATGCAAAAGCCCCAAGATATGAATGCCCTCACTGCAATATGAGGTTCGCGGGCTATTACCATAGAATGAACCACTTAAACGAAGCGCATAGAGTTAAAGAAGTATCATACAGATGCGCACATTGTGAGTTATCTTTTAAAACGAGTGGAAAACGAGCTATTCATGTGCGCACTGTCCACTTTCCGCCGCAGCGTGATTTCGCTTGCTCGTACTGTGAGTGGCATTTTAAGACCAGTTACGAGTTGAAGAGGCATATGGTTAAACACACTGGAAGCGCTATCGCGAATGTTGAAGCAAAAGTAGAAGTTAAAAAACCTAGGAAGATAAAAGAGATCGTTTCTGCACGTCAGATGCGCCGGCGCCAAAGAAAAAACAATGAACTCCCGAAACGTTGCTATACCGAGTCGTACATTTTGAAAACCAACATGCGTCAGAATGCAATGGTCATTCTAGAAAATTCTACTGCTTGGGCATTTCGTTGGTTTCATTCCGTGTTTTATTGTTCCTATTGCGAGGAAAAGTTTGTTGACATCGCGCCTCTAAGAACTCATGTTCAAATGAATCATTTAAAAGACATGCCCACTAAATTAATCTTTAAGAAACTCACGGAAAATTCTATGGTCAAAATTGATATTAAAGATTTAAGATGTAGACTCTGTAATTTCAGTCTTTATAGTATAAATGATCTTAAAGAGCATTTAATTAATTCGCATGACAAAACATTCAATACAGAATATAACGATGGTGTATTACCATTTCGATTGGATGAAAAAGTATTTCAATGTCCCATTTGCAATGAAAGTTTCCCAACTTTTCCACCAATGAACAATCATATAAATACGCACTACAAGAATTATATATGTGACATCTGTGCTAAACCATTCGTATCTCTGCCGCGATTTCGTGCGCATGTGCAAACTCATAAAGTCGGTGAATTCCGCTGCGCTGAATGTGGCGAAGTATTTGACACGATTCTCGCTAGAATAAGCCACAGATCGCAAGTCCATCGTAAAGGTATAAGATACGCGTGTCCAAGATGCCCAGAAACGTTCAAGCATTACCATCTTAGAGCTAAACATTTGGACCAAGAGCATGCGCAAGAACAGAACGTTTACAGCTGCACCGGCTGTGGAATAGCATTCGCCACAAGCTGGTCCGAAGACGAAGAAACAGATGCGGAGGGACAAAAAAATACCATTAATGTTAAGTGGATAAAAAAGCGTCGCGGCGTTAACGAGAGAAAAGCAAACGCTGCTTTGATACTGGAAAATTCTAATGCTGTGGTTTTCAGATGGAAACGCGGGAAGTTCATGTGTGCTTACTGCCCAGCATTGTGCCCGAACGCTAGGGACTTGCGTGCTCACGCCGATACACACAGCAACAAAATAGATGTGCTGGAGAAACCAGAATTACGCGTAACATTCCCACTGAAAATTGAAATTAGTGATCTTATATGTACTGTTTGCAATACCAATGTTGAATCCCTTAAAGAACTGAAAACTCATTTGGCAACTGCACATTCGATGAATATGAATCCTGGTTATAGTGATGGAGTAATACCGTTCGTCCTTACCGGCAAGGAATGTAGATGTGTGCAATGCGAACTGCTGTTTGAAAATTTTATGACACTCTTTATTCATACTAATGAACATTATCAAAGTTACGTCTGTATGACTTGCGGCAAGGGGTTCTCTTCAGAGAACAAACTGCGATCACATCGCATCAAGCATGAGATTGGCGAGTACGCTTGTTCGAAGTGTAACCTAGTGTTTTCTAATAGAGGCGTTAAAAATAGGCACGTCATTGTGTCGCATGGACCGAAGAAGCGATACCGCTGTCCTATTTGTAATGAATATTTCGATTCATATCACGCTCGATTGCGGCATCTTGACAGGGTTCACGGGCAAAAAGCTGAATATAAATGTAGTTTATGTCCATCTGTTTTCGCCACAGGGTCCGTCGTACTCAAACTTAAGTGGAAGTCACACCGAAAGTTCAATGACCCCAGGGACAATGCCTTCATTATCATCGATAATTCCAACGTATGCCCATTTAGGTGGAAAAGGGGCCTGTTTGCTTGCGCATACTGTACTGTCACATTCGCAGACTTTATGGAACTCAAAGACCATACTATAGGACATTCTGTAGATCAGTCCTGCAGGAGTGATGAGTTACGTTATGTCAGGGACAATATCAAAGTTGATATTACCGGATTGCAATGCGAAATTTGTTTAGTTAAATTCGATGACATCAACACTTTTTGCGATCACTTAATTGCGGAACATGACAAACCTATCAACAAAGAGCTCGGCATAGGAGTTACAGCTTTCTTCATGGATAAAAAACAGTTCACCTGCACTCAGTGCAATGAACATTTCCAGTTCTTTACAAAGCTTAACACTCACATGAATCAGCACTTCCCTAATAATATCTGCTTCCAATGCGGCAAAGCGTTCACAGCACTCCATAGACTTAAAGCCCATATGAACGTACACGAATCTGGAGACATCGAGCATAAATGCCATAGATGCGATGAAACATTTGCCACAAGGGCCATCAAAAATAGCCACCTAATAACCGTTCACGGACTACAGAGATACAAGTGCCCGTACTGCAATGAACACTTCAACCGGTATTCAGATAGATTGAAACATTTGAGAGCTGCGCATGGCAGCAAAATTGAGTATCCTTGCCATTTGTGCAAATCAGTTTTCTCAATGTGTAACCAAAGAACCAAGCACATTCGCCAAGTGCATGTAAAGCCGAAACAGTACTCGTGCGAGTACTGTCCGTACCAGTTCGTTACAGCTGGTCAACTGAAGAATCACCTAGTAAAACATATCGGCGAAAGGACATTTCAATGCCAGGTCTGTAAGAAGGCATACGCGAGAGCAAAGACGCTGCGAGAGCATATGAGAATACATAACAATGATAAACGATTCACGTGTGAATTTTGTAATAACGCTTATGTACAAAAATGTAGTCTACAAAGTCATATTCGAACGCATCACCAACAGAATATGGATATAAAGAAAATTAAAACGTCAAATGTTTATTAA
Protein Sequence: MYYLLAVPRNPVHVESSGQQEISDKEPVIKTCAESSAVEPSVEKEKRKYQRTARAEARFITKNNASSILQCWSVCPFRWKRNRFKCGYCEENFIDCNPLREHVRVCSFQHSVKDIYSKFKEMSLINVDVTNALCRYCGMPSNDVKDMREHVTQHGFAFDANHPDGVLPFSLDKDLWQCVICQEKFNNFLKLYEHMNVHYQHYICATCGKGYMTAPRLRKHAESHVSGTFPCNECGRVFNMRAARDHHKANAHAKAPRYECPHCNMRFAGYYHRMNHLNEAHRVKEVSYRCAHCELSFKTSGKRAIHVRTVHFPPQRDFACSYCEWHFKTSYELKRHMVKHTGSAIANVEAKVEVKKPRKIKEIVSARQMRRRQRKNNELPKRCYTESYILKTNMRQNAMVILENSTAWAFRWFHSVFYCSYCEEKFVDIAPLRTHVQMNHLKDMPTKLIFKKLTENSMVKIDIKDLRCRLCNFSLYSINDLKEHLINSHDKTFNTEYNDGVLPFRLDEKVFQCPICNESFPTFPPMNNHINTHYKNYICDICAKPFVSLPRFRAHVQTHKVGEFRCAECGEVFDTILARISHRSQVHRKGIRYACPRCPETFKHYHLRAKHLDQEHAQEQNVYSCTGCGIAFATSWSEDEETDAEGQKNTINVKWIKKRRGVNERKANAALILENSNAVVFRWKRGKFMCAYCPALCPNARDLRAHADTHSNKIDVLEKPELRVTFPLKIEISDLICTVCNTNVESLKELKTHLATAHSMNMNPGYSDGVIPFVLTGKECRCVQCELLFENFMTLFIHTNEHYQSYVCMTCGKGFSSENKLRSHRIKHEIGEYACSKCNLVFSNRGVKNRHVIVSHGPKKRYRCPICNEYFDSYHARLRHLDRVHGQKAEYKCSLCPSVFATGSVVLKLKWKSHRKFNDPRDNAFIIIDNSNVCPFRWKRGLFACAYCTVTFADFMELKDHTIGHSVDQSCRSDELRYVRDNIKVDITGLQCEICLVKFDDINTFCDHLIAEHDKPINKELGIGVTAFFMDKKQFTCTQCNEHFQFFTKLNTHMNQHFPNNICFQCGKAFTALHRLKAHMNVHESGDIEHKCHRCDETFATRAIKNSHLITVHGLQRYKCPYCNEHFNRYSDRLKHLRAAHGSKIEYPCHLCKSVFSMCNQRTKHIRQVHVKPKQYSCEYCPYQFVTAGQLKNHLVKHIGERTFQCQVCKKAYARAKTLREHMRIHNNDKRFTCEFCNNAYVQKCSLQSHIRTHHQQNMDIKKIKTSNVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -