Basic Information

Insect: Carposina sasakii
Gene Symbol: -
Assembly: GCA_014607495.2
Location: CP053172.1:6113815-6117798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.18 14 7.0 0.8 1 23 68 90 68 90 0.93

2 32 0.011 0.89 10.8 0.1 2 23 117 139 116 139 0.93

3 32 0.2 16 6.8 0.2 2 23 160 182 159 182 0.92

4 32 0.00012 0.0093 17.0 1.5 1 23 187 209 187 209 0.98

5 32 0.021 1.6 9.9 3.4 1 23 213 236 213 236 0.93

6 32 0.054 4.2 8.6 0.7 3 23 240 261 238 261 0.94

7 32 0.54 42 5.5 0.1 2 20 268 286 267 288 0.91

8 32 0.00026 0.02 15.9 1.7 1 23 334 357 334 357 0.97

9 32 5.5 4.2e+02 2.3 0.1 2 23 385 407 384 408 0.91

10 32 0.00042 0.032 15.3 0.2 1 23 429 452 429 452 0.97

11 32 1.9e-05 0.0015 19.5 0.7 2 23 458 480 457 480 0.95

12 32 4.6e-05 0.0036 18.3 1.9 1 23 485 508 485 508 0.96

13 32 0.007 0.54 11.4 0.2 3 23 515 536 514 536 0.91

14 32 0.00042 0.033 15.3 5.6 1 23 540 563 540 563 0.97

15 32 0.015 1.1 10.4 0.4 3 23 571 591 570 591 0.97

16 32 0.064 5 8.4 2.4 1 23 597 619 597 619 0.96

17 32 0.0029 0.23 12.6 4.9 1 23 663 685 663 685 0.99

18 32 0.36 28 6.0 0.0 3 23 714 735 712 735 0.91

19 32 0.013 0.99 10.6 1.5 2 23 756 778 755 778 0.94

20 32 4.8e-05 0.0037 18.2 0.8 1 23 783 806 783 806 0.98

21 32 0.0017 0.13 13.3 0.8 1 23 811 834 811 834 0.97

22 32 0.04 3.1 9.1 0.2 3 23 838 859 836 859 0.87

23 32 0.93 73 4.7 4.4 1 21 864 884 864 885 0.93

24 32 0.96 75 4.7 3.3 3 23 942 963 940 963 0.95

25 32 8.1 6.3e+02 1.8 0.2 2 23 991 1013 990 1013 0.92

26 32 0.041 3.2 9.0 0.2 2 23 1036 1058 1035 1058 0.93

27 32 0.0009 0.07 14.2 0.4 3 23 1065 1086 1063 1086 0.93

28 32 0.0011 0.083 14.0 3.3 2 23 1091 1113 1090 1113 0.95

29 32 0.00014 0.011 16.7 0.8 1 23 1118 1141 1118 1141 0.97

30 32 8.7e-05 0.0068 17.4 5.7 1 23 1145 1168 1145 1168 0.97

31 32 0.00094 0.073 14.2 0.5 2 23 1175 1196 1174 1196 0.96

32 32 0.0016 0.13 13.4 1.3 1 23 1202 1224 1202 1224 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.18	14	7.0	0.8	1	23	68	90	68	90	0.93
2	32	0.011	0.89	10.8	0.1	2	23	117	139	116	139	0.93
3	32	0.2	16	6.8	0.2	2	23	160	182	159	182	0.92
4	32	0.00012	0.0093	17.0	1.5	1	23	187	209	187	209	0.98
5	32	0.021	1.6	9.9	3.4	1	23	213	236	213	236	0.93
6	32	0.054	4.2	8.6	0.7	3	23	240	261	238	261	0.94
7	32	0.54	42	5.5	0.1	2	20	268	286	267	288	0.91
8	32	0.00026	0.02	15.9	1.7	1	23	334	357	334	357	0.97
9	32	5.5	4.2e+02	2.3	0.1	2	23	385	407	384	408	0.91
10	32	0.00042	0.032	15.3	0.2	1	23	429	452	429	452	0.97
11	32	1.9e-05	0.0015	19.5	0.7	2	23	458	480	457	480	0.95
12	32	4.6e-05	0.0036	18.3	1.9	1	23	485	508	485	508	0.96
13	32	0.007	0.54	11.4	0.2	3	23	515	536	514	536	0.91
14	32	0.00042	0.033	15.3	5.6	1	23	540	563	540	563	0.97
15	32	0.015	1.1	10.4	0.4	3	23	571	591	570	591	0.97
16	32	0.064	5	8.4	2.4	1	23	597	619	597	619	0.96
17	32	0.0029	0.23	12.6	4.9	1	23	663	685	663	685	0.99
18	32	0.36	28	6.0	0.0	3	23	714	735	712	735	0.91
19	32	0.013	0.99	10.6	1.5	2	23	756	778	755	778	0.94
20	32	4.8e-05	0.0037	18.2	0.8	1	23	783	806	783	806	0.98
21	32	0.0017	0.13	13.3	0.8	1	23	811	834	811	834	0.97
22	32	0.04	3.1	9.1	0.2	3	23	838	859	836	859	0.87
23	32	0.93	73	4.7	4.4	1	21	864	884	864	885	0.93
24	32	0.96	75	4.7	3.3	3	23	942	963	940	963	0.95
25	32	8.1	6.3e+02	1.8	0.2	2	23	991	1013	990	1013	0.92
26	32	0.041	3.2	9.0	0.2	2	23	1036	1058	1035	1058	0.93
27	32	0.0009	0.07	14.2	0.4	3	23	1065	1086	1063	1086	0.93
28	32	0.0011	0.083	14.0	3.3	2	23	1091	1113	1090	1113	0.95
29	32	0.00014	0.011	16.7	0.8	1	23	1118	1141	1118	1141	0.97
30	32	8.7e-05	0.0068	17.4	5.7	1	23	1145	1168	1145	1168	0.97
31	32	0.00094	0.073	14.2	0.5	2	23	1175	1196	1174	1196	0.96
32	32	0.0016	0.13	13.4	1.3	1	23	1202	1224	1202	1224	0.96

Sequence Information

Coding Sequence: ATGGGGAAAAACTCGACGTTACTATTGCTATATCACCGCCCAGATAATGTGTTAAAACAGACAAGAGGTAAAATAATACATTTCTTTTCAGATAAAAACGGATCGCCAAAGAGCTTGAAGAGATTAAATAAAATGAGGAGGAAAAATCTTCAAATACTCTTCAACAACACGACGGTGTTCCCATTTAAATGGTGGCAAAAGTTCTTGTGTTTTTATTGTGGGGAAGATATGAAAACTTACGACACTCTCAAATCGCACACTCTAGAGCACGGACAAACCACGGACCCTAAGACGTTCAAAGATATCAAATCTGTGGATGCCGAAATCAGGGTAGACGTATCCGAACTTATTTGTAGAAATTGTGACGAACCCTTCACGAAATTGGACGAATTGGTCGATCATCTAATAAATAAACACAAGCTACCGTTTAATAAAGACGCTGAGCTAACTATGATGGCGTACCGTTTATCTGATCTGAAATGTATTGAATGCGATGAGGTGTTTACCGCATTTGCCAAATTAAACTCTCATGTGAACTCCAAACATTCCAGTAAGCGTTTTATATGCCAGACTTGCGATCTAGTCTTTTATAAGAAAAGGGATTTGACCGCGCACTTTAGGACTCATAGGAAGCTGTTTACCTGCAGTAAATGTACTATTACCTATACCACGATACAAGAGCTAAACAAACATAGGTACCACGAGCATTCCTACTGGTGCGAGTTGTGCTCAAAGCAATTCTTCTCGGCCAACAAATTGTTTAAACATGCGTCGTCAATTCACTTTACTAACGGCATTCTAGAATGCTCCAAATGCTACGTCATTTTTGAATCGAAAAAAACCTTCATTGACCATGTAGATACTTGTAGTAAACAAATTAAATCCGAAGTTTGCAGAGAAGAGGATGTACAGAAAGCCGACGTGAATCAAATGAGAATTAATATTTCAAATATATTTAACATGTCCACAGCATGGCCCTTTAAGCATTACATGAATAGGTTCAGGTGTTTTTATTGCCCGAAAGACTTTATTGACTGCGATCTTCTAAAAGAACATACCTTAACTGCTCACCCGGTTTGCGATACCACTTTAAAATCAATGCGATTGAGGAACCGTTTAGATGCGTGTATCAAAGCGGACGTTTACATACTTTCTTGTAAGATCTGCTTTGCGCCAATGCAAGACTTGTCTAGCTTAATCGACCATTTGATTATTGTCCATCACGTCGAATACGATAAGTCTGTCGAAAACAATATCCAGCCTTACCAGTTGATCAGAGACAACTACCCCTGTCCTTTCTGCGGTGAGGTCTACACCTTCTTCGGCACCCTACTCAGACACGTCAGCACAACGCATTCGGACAACAAACTCATTTGCATGTACTGCGGCATGTCGTTCCGAAACAAGCCCAATCTCCGATCACATATATCGAGGAAACATAAAGACGCGACCTACAGGTGCACGGAATGCACATCCTCTTTCTTCACGTCAAGTGATTTGCAACGGCATATGGGGAAGAACCACGGGACGAAGGTTAGCGCATGCCCGCAATGCCCAGAAAAGTTTGTTTCCCAGTATTCCAAGAAAAGGCATTTGGTCTTAGTGCACGGGGTTGGACACAAATGTACTTACTGCAGCAAAATGTTCACGAGAAACTCTTTTATGTTAAACCACGTGAGACGGACGCATTTGAAGGAGAAGAATGTGGCTTGCTCTGTCTGTGGATTGAGGTTCTTTGACGAGCAACGCCTGAAGATGCATATGGTCAAGCATATCGGCGAAAGAAATTTCCACTGTGATGTGTGCGGAAAGAAGTTTCTGTGGAAGAAAAATCTCAGGGGACACATGACATCTCATTTGAAGAACAGAGACGCTTTTTTTTCAGGTGCGATAACCGCGGGCGCGGGTACCTTCGAACGCAGACGGGCAAACCTGACGGTTCTTTTCAACAACACCTCAATAATACCGTTCAAATGGCGCGGCAGATACCGCTGCTTCTACTGCGGACAAACGTGCCCCGAATACACCCAACTTAGGAAACACACGAAATCTCACGGCTCATGTACAACTAGAGACTATTCTCTGAAAGCTCTTAAGAACAACCAGATTGAGGTCAAAATAGATGTGTCGGAAATTGCGTGTGACGTATGCGAGGAACGTTTTGCTACAGTAGATGACGTTGTATCTCATCTGATAGGGAAACACCGTTTGAATTACGATGAGCAGGTGGATATGCCGTTACAAGTGTACAGACTAGTTGACTGTAGGTGCCTATTCTGCGATGAACAGTTCAGTTATTTTGGGAACTTGGTGCAGCATGTCAATGTCAATCATCCTCAAAACGAATTCGTTTGTAATTATTGCGGAGGCGCCTATAATAAAAAGCGGGATTTGGCGCATCATATCAGGACAGTTCACCGCGAAGGAGGTTACCCCTGCGATCAGTGTGCGAAGGTCTTCGAAACTAGGCAGCTGCTTTTGAGTCATAAGAACAAGTTTCATTTCAAGAAATGTATAGTCTGTGTTCAATCGTTCTCCACAAATGCTCTGTTGAAAAAACATGTAGCGCTAGAACATTCCAAATCTGATTTCAAGTGCGATTTTTGTTCAAAGCAATTCCGTTCTCTGCAAGGGTGTAATCACCATCTTAGGATCTGTAAGGTTAGGGTAATAACGCAAAAGTTACTACCAATTAACACTCCCGACGAGGAACCATTAGTTCCGAAAAAAAAGAAGCAAAACGTTGCGCGTATCAGAAAGAATATCCATTGCGTATTGAACATGTCCACCGCGGTGCCGTTTAAGTTCCTAGCCAAGTTTGGCTGCTTCTATTGTCACTCAAAGTTCGTCGAGTTCGATGATTTGAAAGCGCACACGCATTCCGAACACCCTGTCTGCGATCTAAAAGCGGAATGCATGAGAAGATGCAAAGGCGACCGAGTTACGGTAAAAATTGATATTGTAGCATTAACTTGCAGACTGTGCTCGCAAACGCAAGAAGATCTCGATAGTTTAATCGATCATTTGATATCTAAACACAACGCGGATTACGATAAATCAATCGATTCCTGTTTTCAACCTCATAGAATTATTAAAGACAACATTCAATGCCCGTCTTGCTCGAAAGTGTTTAGATACTTCAACATCCTGCTGAGGCATATCAACGCGGATCACAGCAACAACTCGAGCATCTGCGATTTTTGCGGCCGCAGTTTCGGCAATATGACCAATCTAAACATTCATATAGCGCATATCCACAACGGACGTTGCGAGTGCGAAATTTGCGGCGCGAAGTTCAAGAACCAACAGTGTTTGGCTCGACACAAGGCGACCAATCACGACGTGAGAGACTATCCTTGCCCTAAATGCCCGGAGAAGTTCCAATCGCAGTATCAAAAGCAGAAGCACATGATCAAAGTGCACGATATAGGGCACAAATGCAGCTACTGCAATAGAATGTTTACTAGGAACTCGTTCATGAAAGACCACATTCGTCGAACCCATTTGAAGGAGAAAAACGTTAGCTGCACACTCTGCACTGAAAAGTTTTTCGATAACTACCTGCTGAAGCTGCACATGGCCATGCATCAGGGTGATAGGAAGTTTACTTGCGGTATTTGTAGCAAGTCGTTTCTTAGGCGCAGTAATTTGTACTCGCACAATGAGATGCATAAGAAGTATGGGCATGACAAGTTGTAA
Protein Sequence: MGKNSTLLLLYHRPDNVLKQTRGKIIHFFSDKNGSPKSLKRLNKMRRKNLQILFNNTTVFPFKWWQKFLCFYCGEDMKTYDTLKSHTLEHGQTTDPKTFKDIKSVDAEIRVDVSELICRNCDEPFTKLDELVDHLINKHKLPFNKDAELTMMAYRLSDLKCIECDEVFTAFAKLNSHVNSKHSSKRFICQTCDLVFYKKRDLTAHFRTHRKLFTCSKCTITYTTIQELNKHRYHEHSYWCELCSKQFFSANKLFKHASSIHFTNGILECSKCYVIFESKKTFIDHVDTCSKQIKSEVCREEDVQKADVNQMRINISNIFNMSTAWPFKHYMNRFRCFYCPKDFIDCDLLKEHTLTAHPVCDTTLKSMRLRNRLDACIKADVYILSCKICFAPMQDLSSLIDHLIIVHHVEYDKSVENNIQPYQLIRDNYPCPFCGEVYTFFGTLLRHVSTTHSDNKLICMYCGMSFRNKPNLRSHISRKHKDATYRCTECTSSFFTSSDLQRHMGKNHGTKVSACPQCPEKFVSQYSKKRHLVLVHGVGHKCTYCSKMFTRNSFMLNHVRRTHLKEKNVACSVCGLRFFDEQRLKMHMVKHIGERNFHCDVCGKKFLWKKNLRGHMTSHLKNRDAFFSGAITAGAGTFERRRANLTVLFNNTSIIPFKWRGRYRCFYCGQTCPEYTQLRKHTKSHGSCTTRDYSLKALKNNQIEVKIDVSEIACDVCEERFATVDDVVSHLIGKHRLNYDEQVDMPLQVYRLVDCRCLFCDEQFSYFGNLVQHVNVNHPQNEFVCNYCGGAYNKKRDLAHHIRTVHREGGYPCDQCAKVFETRQLLLSHKNKFHFKKCIVCVQSFSTNALLKKHVALEHSKSDFKCDFCSKQFRSLQGCNHHLRICKVRVITQKLLPINTPDEEPLVPKKKKQNVARIRKNIHCVLNMSTAVPFKFLAKFGCFYCHSKFVEFDDLKAHTHSEHPVCDLKAECMRRCKGDRVTVKIDIVALTCRLCSQTQEDLDSLIDHLISKHNADYDKSIDSCFQPHRIIKDNIQCPSCSKVFRYFNILLRHINADHSNNSSICDFCGRSFGNMTNLNIHIAHIHNGRCECEICGAKFKNQQCLARHKATNHDVRDYPCPKCPEKFQSQYQKQKHMIKVHDIGHKCSYCNRMFTRNSFMKDHIRRTHLKEKNVSCTLCTEKFFDNYLLKLHMAMHQGDRKFTCGICSKSFLRRSNLYSHNEMHKKYGHDKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -