Basic Information

Insect: Carposina sasakii
Gene Symbol: -
Assembly: GCA_014607495.2
Location: CP053177.1:5369318-5372747[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.037 18 6.1 0.2 18 43 7 29 2 30 0.88

2 15 9.6 4.6e+03 -1.6 0.0 19 43 36 57 34 58 0.65

3 15 0.02 9.8 6.9 0.0 18 43 66 88 62 89 0.84

4 15 0.00027 0.13 12.9 0.2 17 44 96 120 93 120 0.92

5 15 0.1 49 4.7 0.8 18 43 127 149 122 150 0.87

6 15 0.001 0.48 11.1 3.1 14 43 154 180 149 181 0.86

7 15 0.0037 1.8 9.3 1.4 18 44 187 210 181 210 0.90

8 15 1.1 5.1e+02 1.4 0.0 17 44 231 255 221 255 0.80

9 15 0.31 1.5e+02 3.1 0.0 15 43 281 306 271 307 0.86

10 15 3.4 1.7e+03 -0.2 1.0 18 43 388 410 385 411 0.79

11 15 2.3 1.1e+03 0.3 7.5 5 29 404 428 399 440 0.71

12 15 0.08 39 5.0 7.5 6 43 434 468 428 469 0.87

13 15 0.65 3.1e+02 2.1 2.6 18 44 475 498 471 498 0.83

14 15 7.2e-05 0.035 14.8 1.1 6 43 587 621 585 622 0.91

15 15 0.9 4.3e+02 1.6 0.1 16 27 670 681 661 683 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.037	18	6.1	0.2	18	43	7	29	2	30	0.88
2	15	9.6	4.6e+03	-1.6	0.0	19	43	36	57	34	58	0.65
3	15	0.02	9.8	6.9	0.0	18	43	66	88	62	89	0.84
4	15	0.00027	0.13	12.9	0.2	17	44	96	120	93	120	0.92
5	15	0.1	49	4.7	0.8	18	43	127	149	122	150	0.87
6	15	0.001	0.48	11.1	3.1	14	43	154	180	149	181	0.86
7	15	0.0037	1.8	9.3	1.4	18	44	187	210	181	210	0.90
8	15	1.1	5.1e+02	1.4	0.0	17	44	231	255	221	255	0.80
9	15	0.31	1.5e+02	3.1	0.0	15	43	281	306	271	307	0.86
10	15	3.4	1.7e+03	-0.2	1.0	18	43	388	410	385	411	0.79
11	15	2.3	1.1e+03	0.3	7.5	5	29	404	428	399	440	0.71
12	15	0.08	39	5.0	7.5	6	43	434	468	428	469	0.87
13	15	0.65	3.1e+02	2.1	2.6	18	44	475	498	471	498	0.83
14	15	7.2e-05	0.035	14.8	1.1	6	43	587	621	585	622	0.91
15	15	0.9	4.3e+02	1.6	0.1	16	27	670	681	661	683	0.80

Sequence Information

Coding Sequence: ATGGCAAACTCAGATTATGTTTGCGACTATTGCAGCCGCAGCTTCACAAGGAAGTACAATTTATTAAATCACATAGATAATTTTCATTTAAATCCAACATCTTACTGTGATATATGTGATTCGACCTTTGGCAGTCCTGCAGGCCTCCAACTACATTTAGAAAGAGGCCACAATCGTTATGGACAGGCATTTCCGGAATGTGATATCTGTGGCCGAGTGTTTACCCGAAGACAGAATATAGTATCCCATATGATAACTATTCATCTTCAGGGTATAGCTCCACAAATTGCTTGCCAGTATTGTCCAAAAACCTTTAGTACGGACAGGAATTTAAAAAGGCATATGAATCAACTTCACAATCCCGATGCAGGGCATTTATCTTGCAATGACTGCTCTAAGGTATTTAAAGGGAAACATTCACTTATAGCTCATATACAAGCAATACATAATGCTAGCGAAAAGGATGTTATCAAATGCGAACTATGTAATAAAGTGTACACAAATAACAGAAACTTAAAAAGGCATTTTGAAATGTTTCACGGAGAGAAAGAGGAGTTTAGATGCAGTGTTTGCCCTAAAGCCTACACTTCTAACCAGAGTTTGAGACGACATATTCGCACGAGGCATAATACAGGGAATTTTAACGACACCGCCTTCAACGAACCTCCATATATCTCTAATGACGCGAACTATATCTGCGAAACTTGCAACGACGCTTTCGAATTAGAATCCCAATTGCGTCAGCATATAAAAAACGAGCACTCATTCGATACTTTCTACGAATTCTGCAGAAGATCGCTCGTTCAACAAGCTGAGAAGATTGACGTGTTGGCCAAAACTGGTGCGAGTCAGTGCGAGTTCTGTACCAACGCGTTTCCAAATGTGTACACTTTGAAGGACCATATGAAAGCCGCTCATGACGTTGAGTATAGCTTATCCACCTGCAATGTGTGTTTCGCCAAGTATTACAGCAAAGAAGCCTTGCTGAAACACAAAGATACGTGTATACCTCCAAGGGATGCCAACTCTTGTACAAATTGCGATAAACTTTTCACTGACGTTTCGAGTCTAGAGTTCCACGTTCGAATTTTCCATCCCCAAGCTCAAATTGCCGATTCGAAAATAACTTCGACTAATGAAGATTCGGAATGCGATATTTTCAAATGTACCGATTGCGATCGAGTGTATTACAGCGATAGATCGCTAAAGCATCATATCAAATTGAAGCATACAACCGATGAGGCGATGGAATGCGAATTTTGCGGTAAAATATGCAATAACAAATACTATTTGGCATCTCACATTAAGATTGTACATAATAACGATACATTATCTAAATGTGAGTTTTGCGATAAGCATTTCAAATCAAAACGAAACATCAGACGTCACATAGAACATACCCATTTGGGCATGCAAAGACATAAGTGTATAGAGTGCGAAACGCTTTTTAAAGAGAAGCGGAGCTTGCGAAAACACGTGAGAACCAAGCATCCCAATTCCACAATATTCCCTCAATGCCATTTCTGCCACAAGCGATTCGAGTCAGCGAAATCTTGCAAAATACATTTGAAGTTACTGCATTCGTTTAACATGAATACTCATCCATGCGATATATGCTCAGCATCTTTCGGGTCTACTGATGCTCTCGACATACATTTGAGAACGAAGCATCATTCTTCGGAAGCCATTTTTAAATGCCAAGATTGTAACGTGGTTTTCCAAGGGCAGCACAAGTTTGAAGTTCACATGCATGTCCATCATGCGAACTTTACGCCCCCTAAAGTTAATAAGCCGAGATGTGTTATCTGTGATAAGGATTTTAGTACACGAAAGACTTTGAGGCGTCATATAAAGAGGTTCCATTTGGAATTTAACGCGGACGAATTGGCCGTTTTTGGCAGCAAAATGGGGAGTTTCGTTGTCGAGTGTGAGGACTGTATCATCAATTTCAACGATGATTTTTACTACAAGGTCTATCTGAAACTGAAACATTTGCCCGACTCGGTTATATTCAAATGCGAGTATTGTAAATCCTCGTATAATTCCTTGGAATTCGCAATCCAGCGGTGTAAGTTTGCCAACATGGATGCGGTTAAGAGTAAAATGGTTTTGAGCGAATTTTGCACAACCGAAATGAGCGCCGATGAAGAAACGTTTGATGCAATGGAACCGGAAAGCACTACCGCTGATATTAAAGTAGAACCTCAAGACCATGAACAGGTTACTGAAATAAAAACTGAACCGTTGTCTCCTTAG
Protein Sequence: MANSDYVCDYCSRSFTRKYNLLNHIDNFHLNPTSYCDICDSTFGSPAGLQLHLERGHNRYGQAFPECDICGRVFTRRQNIVSHMITIHLQGIAPQIACQYCPKTFSTDRNLKRHMNQLHNPDAGHLSCNDCSKVFKGKHSLIAHIQAIHNASEKDVIKCELCNKVYTNNRNLKRHFEMFHGEKEEFRCSVCPKAYTSNQSLRRHIRTRHNTGNFNDTAFNEPPYISNDANYICETCNDAFELESQLRQHIKNEHSFDTFYEFCRRSLVQQAEKIDVLAKTGASQCEFCTNAFPNVYTLKDHMKAAHDVEYSLSTCNVCFAKYYSKEALLKHKDTCIPPRDANSCTNCDKLFTDVSSLEFHVRIFHPQAQIADSKITSTNEDSECDIFKCTDCDRVYYSDRSLKHHIKLKHTTDEAMECEFCGKICNNKYYLASHIKIVHNNDTLSKCEFCDKHFKSKRNIRRHIEHTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSTIFPQCHFCHKRFESAKSCKIHLKLLHSFNMNTHPCDICSASFGSTDALDIHLRTKHHSSEAIFKCQDCNVVFQGQHKFEVHMHVHHANFTPPKVNKPRCVICDKDFSTRKTLRRHIKRFHLEFNADELAVFGSKMGSFVVECEDCIINFNDDFYYKVYLKLKHLPDSVIFKCEYCKSSYNSLEFAIQRCKFANMDAVKSKMVLSEFCTTEMSADEETFDAMEPESTTADIKVEPQDHEQVTEIKTEPLSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00276683;
90% Identity: iTF_00276683;
80% Identity: iTF_00276683;