Csas011375.1
Basic Information
- Insect
- Carposina sasakii
- Gene Symbol
- rcor2
- Assembly
- GCA_014607495.2
- Location
- CP053165.1:8636688-8649874[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-09 6.8e-06 26.7 0.0 3 46 127 170 125 170 0.97 2 2 2.5e-11 4.8e-08 33.6 0.0 3 46 368 411 366 411 0.96
Sequence Information
- Coding Sequence
- ATGGTGTTAGCTGAACGAAGCAACGATGTAAGAAACGGAAAGCGATCGAGGGGACCAAGCCCAAATGGCCATGGAAGTCCTGATTCCAGTTCTGAAGACGAAAATGCAGAAAAAATCAGAGTTGGTCGCGACTACCAGGCTGTATGTCCTGAATTGGAACCAGTAGAACAAAGAAGACCAGAACAAATATCTGATAGAGCTCTATTAGTTTGGTCACCCACATGTGACATCTCTGACTCAAAATTGGACGAATATATAACAACGGCTAAGGAAAAATATGGTTATAATGGGGAGCAGGCTCTTGGAATGCTCTTTTGGCATAAACATGATTTGATTCGAGCAACAATTGATCTTGCAAATTTCACACCTTTTCCTGATGAATGGACACTGGAAGACAAGGTTCTATTTGAACAAGCATTTTCATTTCATGGCAAGAGCTTTCACAGGATAAGGCAAATGTTGCCTGACAAATCAATAGCATCATTAGTAAAGTATTATTACTCATGGAAGAAGACTAGAGCTAGGACCTCGTTGATGGATGTGGCCGGCGAGGGGAGAAATGCCACAGCATCAGGTACAGGGAAAAGGGATTCTGGAGCAGGGTCAGAAACCCTTGGTGGATCAGACAAGGAGTCTGATAATGATGAAAAGGGCGAGAAAGGAGGCGACAGTGCAGGCAAATGGTGTTCCGTGTGCGGCATTATGTGCTTCCAGACCACACAGCATAACTCGCAAAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGACGCACCGGCACTATGAGACCGCTGTGCGGCCCGTCCGGCCGGCGCGGGCCCGGCTCCAAACAGCAGCGGTACAAGCACCGCCTGCCGCGCGGCATTTACATCAATCACGACGATCTCGTCGCCATGGCGACCGGCCCGCAGCCCGGCGACCCGGCGCAGCCCGGCCTGATCAACCAGGGCGACGCCATGCTCAAAGCGATGGACAGGGAAACCGTATCGCTCAAGAGACAAGTCCAGCAAAATAAGCAGCAATTAAGTGCAATGAAGCGTAAAGTAGGGGACGTTGGTGTGGAAGAGTTCAGACCTGGTGAACCTCCGGCGAAGATTAATTCTCGTTGGACTAATGATGAATTGCTTATGGCCGTCACAGCTGTTAGGAAATATGGAAGGGACTTCCAGGCTATCGCTGAGACCCTGGGCACTAAGACAGAGGCACATATCCGTACGTTCTTCATCTCGTATCGACGCCGGTATAATTTGGACGCGGTCGTTAAAGAACACGAGGCGGATCGCGGCAACTCGAATCACATACCTGCCGCAGGTGCAACTAGTACAGAAGCGACAGAGGGAGAGGCTGAAAGCAGTACTGACAAAAACGGCACAGGATCACCTCAATCTACAACAAAGGATGAAAAGACGGAGGTAGATAGCGAGGGAGTAGCAATAGGCGCATCGGCGGAGCAAGGCGGAGCGCCCACCACTCCACACAAGCACAAGCCGGCCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENAEKIRVGRDYQAVCPELEPVEQRRPEQISDRALLVWSPTCDISDSKLDEYITTAKEKYGYNGEQALGMLFWHKHDLIRATIDLANFTPFPDEWTLEDKVLFEQAFSFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVAGEGRNATASGTGKRDSGAGSETLGGSDKESDNDEKGEKGGDSAGKWCSVCGIMCFQTTQHNSQKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDPAQPGLINQGDAMLKAMDRETVSLKRQVQQNKQQLSAMKRKVGDVGVEEFRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAIAETLGTKTEAHIRTFFISYRRRYNLDAVVKEHEADRGNSNHIPAAGATSTEATEGEAESSTDKNGTGSPQSTTKDEKTEVDSEGVAIGASAEQGGAPTTPHKHKPAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- -
- 80% Identity
- -