Csas004871.1
Basic Information
- Insect
- Carposina sasakii
- Gene Symbol
- arid5b
- Assembly
- GCA_014607495.2
- Location
- CP053172.1:4059646-4069732[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-15 1.7e-11 45.0 0.1 2 89 235 309 234 309 0.90
Sequence Information
- Coding Sequence
- ATGGGATCAAACATGCACGTACTCCATGCCTTAACACCTTCTCTTTGTCCCCAGGATGAAGTCCTAGCAATAAACGACAAAGTGGTGTTGAAAGCTGAGGACCTGCTAAGCTGGTTGTGCGTAGGGCTAGGCTGGCGCTGGGGGCTGCGCGCGGTGTGGCGCGGGGACTGCGCCCCGCCGGCCGCGCCGCCCGCCAGCGAGCCGCTGCATCACACCAGTCTGGACTTCAGCGATGTGGACACGGAGAGGAGTGCTATAGTGGACGACGACAGTCCAGCAGTAATGGTGTTCTCGTATCCGCGGTATTGCCGCTACCGCGCGTTGCTCGCGCGACTGGAAGGGATCCGCGGCGACTGGTTACGCGATTCGCTCGTCGCAGCGTTGGGCGGATACGCCGCGCCTACGAGGAACACTAGGATCTTGTACTGCAAGGACACATTCGAATACCCCGAGTTAGAAGGGCACGAGTTCGTCTGTTCTCACTTAGCGCCGAAACTGAAAGGGAGGCCTAGAGGGCGCCGCCGTCGCCCGCCGCGGTCTCGCTCGCACTCGCGCTCCGGCCGCTCTAGTGCGAGTGAGACGGCAGATGCCACGCCACAAACGCCTCGCCGTCTCTCTCTACGCAACGGACCGGAAAAGCAGTCGGACGAAGAAGAAGAAGAAAGAGAAGATGGAGACAGAAAGAGAGAGGACGACGCGGAAAACAAGGCGTTTGTTCAACAATTGAAACAGTTCTATAAGGAGAGGAGCGAACCTTTTAAAGCGGCTAACCCTTTTAAAGATATGTCTCTCCGCAACCTGTACATGCGCGTGCGCCGACTGGGAGGTTACGAAGCGGTCTGTCTACACAAACTGTGGCGACGTGTGGTCACAGACCAGCCGGCGCGGTGTCGCAGTCACTACGAACGGACCCTGTTACCATACGAAAATCACGAGAGAAGAAAACTGTCCTACCCAACGACAAACGGCAAGATAGAACCGCGGACAATAGACACGATAGACGTGTCCGATTCCCCCCTACGAGACATAGACTACACCCCCCAACTCCCCGAGAAACGACTTCGAACCCCCTCCCCAAAACCCCCACCTAAAGTCAAAATCGACAGTGAAACTGGTGAATCCAAAGTTAATTCATATGCGGATGAATTGAACCGCGAATTCTTGGATTCTTTGAATTGTGATAAAGAAAAGCCACTTATATCGGTAAAGCCGGTGGAAAAGCTTATAGCGCCGAAATGTGATAAGGATTTAGCTAAGCATAATTTGATAGAATCTAGCAAATTGGTAGGCGATAACAGTGAGCGGTCCGGGTTTTTGAGCGAGTTGGCGCAGAAGTTGAGTTTAGGTAACCTGGAGTCGCTGAAATGTGAACAGAACGCACTCAGCGGTCTGTCCGGACTGACGGATAAGTATGCGGTCAACGGACACGCGACCGATCAGAAGACACACCGTCCGGCCGGTCGGTCGAGTTTGCGCGCTGTCAGAGTGAAGCCTGTGAGACAAACACCAGCCTCCACACCACCAAATCTTCAACTTCGAGCGGACTCATCATCGTCCCCCTTACCGCCGGCCGGTGGGTCAGGCCCCCCGGCGGGCCGGGACCCCCCCGGGGCCCCCCCGGTGGGTCCCGGCGGCCCCCCGCTCACTAACTTCGGTATACATCACCCGCCGCCGGTACAGGCGCAGAGCGATGATGATATTGTGGAGGTACCTTACAAGCCAAAAAGTCCAGAAATCATCGACCTAGACGAATACCCGGAAAGCCCGCAATCGATCAAGAAGAAAAAACTAGACATACTCAAAGAGAGAGGGCTCGAAGTCACCCCCCTTCCCCCCGCCCCACCCATCATCCACCCGCTAGTCACTCACGCGCATCTCCTGCGAATGTACCATGTCCTACCACAACACTATACCAACGGACACCCCCCTAAAGTCATCCAGGGGACAAGTATTTTCGGAAATCAAGGCCCGGAAAAAACGGTTTACGGCAACCCTAAAGACCCTTTTATGCCACCTCCACATGTACTCCACGGCACGCCAATTAAACCTCAGAGAAACATCTCCCAAACCCCCCAAGATATATTAGACTTAAGCAAAAACGAGCCGGCTGTCGAAATAAGCGTAACAACCCCGTCGCCTTCCAAACCGTCGCCGAAAAACTATACGTTAGTCGACGGAAAGGCGGTGGTAGGCTCAAATCTGGAAATCACCTTAGTCAACCCGAAAACGCCGCCGAAAACGCAGTCGAAGCGTTTCAAACGAAGCTCGAACGGTCAATTCGTGTCGTGCAAAACTCCGACGCCGCCCAAAGAGAAATTCAGTCCCTCACCAAAACCGGCGATAGTCATCCCAAACTACCAAATTCGAGAGGACGTGTCACCTACCAGTTCGACCGGATCCAAAGACTCGCAGACAAACATACAAACGAATATGTTGCAAATGATGAAAAACCAAAATTTAGCCCAAATGATGGAGCTGCAGAAGAATTCTATGCCGATCTCTCCATATATGGATCCGATGTATATGAGTGCGTTATATAACAATTTGGCTGGAATGGACCAAAGGCAGTTGGCTGTATATAGGGATTTGTTTAATTTTCGCGGTTACAGCGGAATATTAAATTTGGGAGTAGCCAGCACTCCAACAACGAAGAATTAG
- Protein Sequence
- MGSNMHVLHALTPSLCPQDEVLAINDKVVLKAEDLLSWLCVGLGWRWGLRAVWRGDCAPPAAPPASEPLHHTSLDFSDVDTERSAIVDDDSPAVMVFSYPRYCRYRALLARLEGIRGDWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCSHLAPKLKGRPRGRRRRPPRSRSHSRSGRSSASETADATPQTPRRLSLRNGPEKQSDEEEEEREDGDRKREDDAENKAFVQQLKQFYKERSEPFKAANPFKDMSLRNLYMRVRRLGGYEAVCLHKLWRRVVTDQPARCRSHYERTLLPYENHERRKLSYPTTNGKIEPRTIDTIDVSDSPLRDIDYTPQLPEKRLRTPSPKPPPKVKIDSETGESKVNSYADELNREFLDSLNCDKEKPLISVKPVEKLIAPKCDKDLAKHNLIESSKLVGDNSERSGFLSELAQKLSLGNLESLKCEQNALSGLSGLTDKYAVNGHATDQKTHRPAGRSSLRAVRVKPVRQTPASTPPNLQLRADSSSSPLPPAGGSGPPAGRDPPGAPPVGPGGPPLTNFGIHHPPPVQAQSDDDIVEVPYKPKSPEIIDLDEYPESPQSIKKKKLDILKERGLEVTPLPPAPPIIHPLVTHAHLLRMYHVLPQHYTNGHPPKVIQGTSIFGNQGPEKTVYGNPKDPFMPPPHVLHGTPIKPQRNISQTPQDILDLSKNEPAVEISVTTPSPSKPSPKNYTLVDGKAVVGSNLEITLVNPKTPPKTQSKRFKRSSNGQFVSCKTPTPPKEKFSPSPKPAIVIPNYQIREDVSPTSSTGSKDSQTNIQTNMLQMMKNQNLAQMMELQKNSMPISPYMDPMYMSALYNNLAGMDQRQLAVYRDLFNFRGYSGILNLGVASTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -