Csas007776.1
Basic Information
- Insect
- Carposina sasakii
- Gene Symbol
- jarid2b
- Assembly
- GCA_014607495.2
- Location
- CP053148.1:8887543-8931198[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-19 2.4e-15 57.3 0.1 6 89 500 578 496 578 0.92
Sequence Information
- Coding Sequence
- ATGTCGAAATTCCGAGCTCAACGCAAATTTGCGCAAGGATACCACATCAACATGACACAGCAGCAAACACCACAGTCCAGTATAGCACCAAAAAGGAATGGGTACCTCCCACCTACCGGAGAACATCTGGCACATAACACCTCTACCACTGCACCAAGAATGTCGAAATTCCGAGCTCAACGCAAATTTGCGCAAGGATACCACATCAACATGACACAGCAGCAAACACCACAGTCCAGTATAGCACCAAAAAGGAATGGCTACCTCCCACCTACCGGAGAACATCTGGCACATAACACCTCTACCACTGCACCAAGGTTACTTGACAAGGTTTCTTTACATGCCCTACATAAGCACCTGCAACCGATAGTTCTAGTAGAAAGGATGGTCACTAACGAATCAACCAGTAACCTGCCATATTCACCATTAGAGGACTTATCATCCGATGTGTGCCCTCCGTTAGTGTTTGATACTTCTTCGCATGAAGACAATCCATATTGTGCTGATATTTATATGAGTGAAGACGACGAACCCCTTACTTATTTTGTACAAGGCAATGAAGAGCCTAAGCCTGTCACTGTCAGCAAGGGGCGCGCTCCATCGCCGTGCCCGTCCTTGTCGGTATTCAGTATAGACGACCTCATGTCCTGCAAGGAGTACTCACGATGCAGGCGACTGCATTGCACAGGTTGCCACCGGGTTTACGATATAGTGCTCAGTGCTAGTAAAAAGATTGCGCCTCCTACCGTCCGCGAGAGCCCGTATAAAAGACAACTCCGGGAGTTAGTAAACAAACTACTTCCACTACTCGAAGTAGACGGAGTGGACCGGACAACGCCAACTAAAGAATTAACTAAAAAAGCCAGTACCACCCCCTCGCGTAGGTCCAAGAGGCTGTTAGTCCAAATCGACAAAGGTGCGAGCAAGGGTAAGAAAACGGCATTAAAAAAATCTTTAAGGAAACCATGTAGAAGTACAAGCACACATACAGAGAATAATAAAAAGCGGAGGAAGATTGCGAAGAATAGCGTGCGCGCCAAATTGCGGCAGGAGCGACACCCAACTACTAGTAGCAGGGATGAGTCTGAACCATCTACGTCTAGATCTAATGCGCGGGTTTCTGCCACCGTGCAGAGAAGGACAAGTCGTGTGTCCAAGCCCACGCCGCCCAAAGCGCCGTCGCCAGAACCTGCCACATCGGTTAAATCCGAAGACGAGGCGATCTCTCTCAGCAACCAAGCCCCGCGCCCTGATCAGAAATCTACGAAGACCGAATTGCTGGAAGCACCTGTGTTTTATCCCACGGAAGAGGAGTTTGATGAACCCATGTCCTATTTGCAGTCCATAATGCCTGAAGTTGCGAAATTCGGAGTAGCAAAAGTAGTGCCACCTAAAGGCTTTTCACCTCCCTGTGTACTACAGGACGATGTGAAGTTTAATGTACAGAACCAATACACGGGACGACTGTTTAACCGATGGGGGACGGCTACGAAGGAAATGGCTGCAATAAAGTATCATTTGGCATCGCAAGGCGTCAAGTTTACTAGAGCTCCACTTATTAATGGATTAGAAGCGAATCTACCAAAATTATTTAACTTAGTGCAACGGCATGGCGGTTTGAAAAACGTGATCGAGCGCAACAAATGGTCGCGTATAGCGCAAGAAATGAACCTGAAAATGAGTTCAAAAAACAAGCTTGACGCACTGTACGTTAAATATATACTGCCGTACGACACGCTGGCTATACATGAAAGGGAGTTCTTGAAACTGGAGATGGAGAGGTTATGGGTGAAGAAGAACAGGAAAATGCTAGGAAGAGCCGTCAACCCTCTACACCGGGTAAAGAAGTTGCTCGAGGAATCCGAGTCTTCCGGCGAGGAAAACGACGAGGACATCGACGAGGCACTCGATGAGGCGGAGGACTGCGTTATTGCCGGCAAAACTGTTGACCTCAAGTCTTTTAAGAAGATCGCCGCGAATGCAGTAAGGATGTACTTCCCCGACGGCCTGCCGAGTACGCAGGACGTAGAGAAGCAATTCTGGAGCATCGTGACGTCGGGCACGGACCACGTGTGTGTGTACTCTGCGTCTGTGGACACGCAGGGAAATGGATACGGATTCACCACGGACAAGGCCGACCCCTACGCCAGACATCCGTGGAACCTCAAACAACTGAGTCAGGACCGCAAGAACTTCCTGCGTCATTTGGGCAAAGTGGTGGGTGCGACGGTGCCGACGCTACACCTCGGGATGACGTTCGCCACCAGCGCGCTGCACCGCGACCCACACGGCTTGCCCTGGCTCGAGTACATGCACAGCGGACCCGGCAAGATATGGTATGGTATAAGCGATAGCAACAACGAGAACTTTCGGCACGCCATGGAAGACGCAATGCCCACGTTCTGCCAGAACAAATCCCTGTGGCTCTCATCTGATATGGCTATGTGTCCTCCTGAAGTTTTACAGTCATACGACGTGTCAATGTGTCGCGTGGTACAGAATCCCGGAGAGTTTATAGTGGTGGCTTCCAAGGCGTATTCCTGCTCTATATCGACCGGGTACACTGTGTCAGAGAGCGTCTACTTTGCGCCCTACTCGTACATCGACACTATAATGCCGATATTTAAAGAGCTGCGAGACAACTGCGAGCCGGCCATGTTTAGCTTAGAGCAGTTATTGCTATCGGCGGCCCGCGCGTGGTGTACCCCGCCCAGCATCATCAAGCAGATCAACCGCTGCCTTGCCGAGGTGCTCACAAGGGAATTACACGCTAGGGCACGCTTGGCACATCTACCCACTGTGGAGCAAAGTAAGAAGAACAAAAAGAAGAACGAAGTGTGTTCCCGAGACAAGGAGTGTTATGTCTGTCAAGTGTCGTTATATCTTTCAGGGGTAACAGGGTTGACGGATGGGCCTGTCTGCCTCGAACATGCCCTTGCCTTGTTAAAGACAACCAAAGGGAACAAACGACCGTTGTCCGAACTGTGCCTAACTCTTTATATTCCCACATCAGAATTGGAAAGTTCGCTTGCCTTAGCCAATAAGATGTAA
- Protein Sequence
- MSKFRAQRKFAQGYHINMTQQQTPQSSIAPKRNGYLPPTGEHLAHNTSTTAPRMSKFRAQRKFAQGYHINMTQQQTPQSSIAPKRNGYLPPTGEHLAHNTSTTAPRLLDKVSLHALHKHLQPIVLVERMVTNESTSNLPYSPLEDLSSDVCPPLVFDTSSHEDNPYCADIYMSEDDEPLTYFVQGNEEPKPVTVSKGRAPSPCPSLSVFSIDDLMSCKEYSRCRRLHCTGCHRVYDIVLSASKKIAPPTVRESPYKRQLRELVNKLLPLLEVDGVDRTTPTKELTKKASTTPSRRSKRLLVQIDKGASKGKKTALKKSLRKPCRSTSTHTENNKKRRKIAKNSVRAKLRQERHPTTSSRDESEPSTSRSNARVSATVQRRTSRVSKPTPPKAPSPEPATSVKSEDEAISLSNQAPRPDQKSTKTELLEAPVFYPTEEEFDEPMSYLQSIMPEVAKFGVAKVVPPKGFSPPCVLQDDVKFNVQNQYTGRLFNRWGTATKEMAAIKYHLASQGVKFTRAPLINGLEANLPKLFNLVQRHGGLKNVIERNKWSRIAQEMNLKMSSKNKLDALYVKYILPYDTLAIHEREFLKLEMERLWVKKNRKMLGRAVNPLHRVKKLLEESESSGEENDEDIDEALDEAEDCVIAGKTVDLKSFKKIAANAVRMYFPDGLPSTQDVEKQFWSIVTSGTDHVCVYSASVDTQGNGYGFTTDKADPYARHPWNLKQLSQDRKNFLRHLGKVVGATVPTLHLGMTFATSALHRDPHGLPWLEYMHSGPGKIWYGISDSNNENFRHAMEDAMPTFCQNKSLWLSSDMAMCPPEVLQSYDVSMCRVVQNPGEFIVVASKAYSCSISTGYTVSESVYFAPYSYIDTIMPIFKELRDNCEPAMFSLEQLLLSAARAWCTPPSIIKQINRCLAEVLTRELHARARLAHLPTVEQSKKNKKKNEVCSRDKECYVCQVSLYLSGVTGLTDGPVCLEHALALLKTTKGNKRPLSELCLTLYIPTSELESSLALANKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -