Csas022318.1
Basic Information
- Insect
- Carposina sasakii
- Gene Symbol
- Arid2
- Assembly
- GCA_014607495.2
- Location
- CP053167.1:8951593-8959426[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-21 4.5e-18 66.1 0.0 2 89 17 101 16 101 0.94 2 2 8.5 2.2e+04 -3.5 0.0 44 67 316 341 308 349 0.62
Sequence Information
- Coding Sequence
- ATGACGAAATATCAAATAAATCTGAAATCCAGTCGTTATCTTCGTGATAAAGAAACCTTTTTAAAAGAGCTTAAACAGTTTAACGATACTAAAAATATACCATACAAAGTTCCCATTGTAAATGGGATTGAAATAGATTTGTATCATTTCTATACTTTGGTGCAACAGAAAGGAGGTCTCAGCAAGGTCAACCAAAATGACATCTGGGATTCATTTTTGCGGCCACTACAGCTGCCGCATCCATGTGTCAATGGATCCACTCTTCTTAGAAGAATATATGGAACATACCTTGAGAAATATGACCGAGCTAAAGGTCCACCAGGGAGGGACGATGACAATGACTTGGATGAGGATCCAAGGAGAACCAGAGGAGGTGGCATGCCCAGGATTACATTTGGAGGAGGAAGCTATATCTCAGCATCTGGCGAGCAACTACGCACAGGCAACCGCGTGGCCGGTCCGTCTGAGAGACTGGCGCTATCGCTGCTGTCCCCCATGCCCAATGAGCAGGACTTTGCTGTGAATGTGTGTACAGTGCTGGCTGCCGACCAGACCAGTCGTCTGCCGTTACCGACTGCCCCGCATATACTGGATTTTCTGCTGGCTCATGCTGGGGTTTACAATCATTCAAGCCTACGTGACACAATCGGGCGTTCGTACTACGAGACCCGAGGTCGTTACCCTCACGAGTTCTGGCAGTTACGTGCGGGGGGAGGCGGCGCTAAGGAACTAGCAGATGAAACCAAGTTCATGCACCTAGATGCTCCAGAGCTGATGGTGCAAGCTTTAGCCGCTCATAACACCCTGACGGATTGTTTAAATGAGGGCTTCGATGACCATGTCTTGGAGAGGGTTGAGGAGTTGAAGAAAATGCAGGAGGAACCGCTAGAAGACTGGGTGACGGAACCGTCGGATGAAGACCAGCTCTTCGCCCCGGTGCTGCCCGGCGGAGCATCATGTGTGTTCACGCAGCGGGTGCAGCAGATAGCGTCTATAGTGCGCTCGCTGAGCTTCCAGGAGGAAAACCTGCCGTATCTGGCTAAGAATACTACGCTTATAAGATTTCTCCTGCTTTGCACCAACTGCTGGGTGGGGACATTACGTCAGATTGGACTGGACGCCCTCGGAAACGTTTCCACTGAGCTTGTTATAAAGGACCCGGCCACCTGCCTGATCTCGCGACACGTGCTGTCCACCATCCAGGCAGCACTGGTGTCTCCGGACCGAGCACGCTGCCTGGCCGCCTTGGAGCTGCTGAACAAACTGGCGCAGAACGAGCTTAATGAGGAGGCGCTGCTCAGGGTCTTGGAGCCTAAGGTGTACGCCGATGTTAGTGCGTGTACGCTCTCACGTCTCTCGGAGACAAGGGCGTGCGAGAGCGTGGCCAAGCTGCCCGGCTTGCTGCAGACTCTCGTCTCGCTGGTCACTGTCGAGGTAAGAGTGCGTGTACGCTCTCACGTCTCTTGCGAGAGCGTGGCCAAGCTGCCCGGCTTGCTGCAGACTGTGGAGGGCGTGCGAGAGCGTGGCCAAGCTGCCCGGCTTGCTGCAGAATATGCCCAAGAACATAGAGTGCGTGACACGTCTCTCGGAGACAGGGCGTGCGAGAGCGTGGCCAACAGACTCTCGTCTCGCTGGTCACTGTCAAGAAATTGTAGCTGCCCGGCTTGCTGCAGACTCTCGTCTCGCTGGTCACTGTCGAGGTATGTGTCTAGAGTGCGTGTACGATCTCACGTCTCTCGGAGACAGGGCGTGCGAGAGCGTGCCAGCTGCCCGGCTTGCTGCAGATATCCTAAACGTCTCTACAGTTTAGACTCTCGTCTCGCTGGTACGTACGCTCTCACGTCTCTACACTGTTTGGCCAAGCTGCCCGGCTTGCTGCAGAACATATGGGTCTCTCGGAGACAGGGCGTGCGAGAGCGTGGCCAAGCTGCCCGGCTTGCTGCAGACTCTCGTCTCGCTGGTCACTGCGAGGTACTAGAGTGCGTGTACGCTCTCACGTATCTCGGAGACAGGGCGTGA
- Protein Sequence
- MTKYQINLKSSRYLRDKETFLKELKQFNDTKNIPYKVPIVNGIEIDLYHFYTLVQQKGGLSKVNQNDIWDSFLRPLQLPHPCVNGSTLLRRIYGTYLEKYDRAKGPPGRDDDNDLDEDPRRTRGGGMPRITFGGGSYISASGEQLRTGNRVAGPSERLALSLLSPMPNEQDFAVNVCTVLAADQTSRLPLPTAPHILDFLLAHAGVYNHSSLRDTIGRSYYETRGRYPHEFWQLRAGGGGAKELADETKFMHLDAPELMVQALAAHNTLTDCLNEGFDDHVLERVEELKKMQEEPLEDWVTEPSDEDQLFAPVLPGGASCVFTQRVQQIASIVRSLSFQEENLPYLAKNTTLIRFLLLCTNCWVGTLRQIGLDALGNVSTELVIKDPATCLISRHVLSTIQAALVSPDRARCLAALELLNKLAQNELNEEALLRVLEPKVYADVSACTLSRLSETRACESVAKLPGLLQTLVSLVTVEVRVRVRSHVSCESVAKLPGLLQTVEGVRERGQAARLAAEYAQEHRVRDTSLGDRACESVANRLSSRWSLSRNCSCPACCRLSSRWSLSRYVSRVRVRSHVSRRQGVRERASCPACCRYPKRLYSLDSRLAGTYALTSLHCLAKLPGLLQNIWVSRRQGVRERGQAARLAADSRLAGHCEVLECVYALTYLGDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -