Cfug030855.1
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- -
- Assembly
- GCA_951230895.1
- Location
- OX579672.1:3062336-3093470[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.2 18 7.0 0.7 2 23 194 216 193 216 0.90 2 12 0.22 20 6.9 2.5 2 21 255 274 254 275 0.93 3 12 3.6 3.2e+02 3.1 3.5 2 23 1023 1044 1022 1044 0.81 4 12 0.05 4.5 8.9 0.6 2 23 1171 1192 1170 1192 0.94 5 12 3.5e-06 0.00032 22.0 4.8 1 23 1254 1276 1254 1276 0.98 6 12 6.8e-06 0.00061 21.1 4.9 1 23 1286 1308 1286 1308 0.98 7 12 6.8e-06 0.00061 21.1 4.9 1 23 1339 1361 1339 1361 0.98 8 12 6.8e-06 0.00061 21.1 4.9 1 23 1392 1414 1392 1414 0.98 9 12 6.8e-06 0.00061 21.1 4.9 1 23 1424 1446 1424 1446 0.98 10 12 0.00014 0.013 16.9 8.1 1 23 1477 1499 1477 1499 0.98 11 12 0.069 6.2 8.5 3.6 2 23 1506 1527 1506 1527 0.97 12 12 0.0015 0.13 13.7 0.5 2 23 1534 1556 1533 1556 0.96
Sequence Information
- Coding Sequence
- ATGTGGCAAAAAAATTATCAACCTCATGTACCGGATTACTATGAAACTTTGATCCAAAATATCCTTAGTGAATGGAGAACATGGAAGGCACTGGTAAAGGGACGATCAACAATCTCAGCGTACAAATGTATTATATGCAGTGTGGGTTGGTGGCATTTGAGTCCGTTCTGGGATCATATAAAGATACACAAAGAGTTGAATCTGAGGTTGGAACCGGCGCAACATGAGTGCTGGGTGGTAGCTGCCCAAGAACACAAGAGGTGCAAGAGAATGTTCATAAGCACTGGTATAAACCAGTTTGAGGGGAATTGTCCAAAGTGTTTGAAACTTACGAAGAACACAACATTTTCGAGACAAATAAAGGATTCTACTACTGCAGTGCTTGTAATGAACGGATTTGAACCTGTATCTCGTCGGTTCTCCGGGCCAGACACAGGCGCACTATACCAATTATGTAAAACGGACTTATTGCTTAAATTCAGGTTCACAACCTGCTTCGGCCGTTTCGTCCATGAGGGCCTGTGCGCGCGATACCACAGGATCGTCTTCCAGCGCGCGATCACCATCGAGTCGAGATGGCGATGCAACATCTGTGACGTCACGTGCGTCACTCAAGAACGCTACGAGATGCATCTCGTGAACTATCACGTGGTCAGGTCGGACTGCCCCATAATCGCACCGCTGCCGCATAAGTGCGTGAATTGTGACATGAAATACCTCATATTCCATCTACACGCGTGTCCCATGAAAACAGAGAAATTGCGCTGCAAGTACTGCCACCGACACTTCCTGAACAAACAGCTGCTCGATATACACATGAACAATACAAAGAAGAGCACAAACTGCAAGATCTGCAAGAGATATTTGAACAGTCAGTGCATGGAAGTGGACCACCTGATAACGCAGCACGTATCCAGTTTCATCTTCATGTACAAGTGTGAACAGTGTCTCGACCACGTGCTGATGACGAGCGAAGGAGCGCTACGGAAGCACAGGACCATGTGGCACAATGCGAAGGAATACACAACGAGTACGATGATAGTGCCGCGGTCCAGCGTCAGCTCGAGCTGGGCCGAGAACGTCTCTGTCGGCGACATGGTCATCGCCAAGAAACAGAATTTGAGACCTGTTCAGGTTAAAAAAGACGACCCGGAAACATTGAACGAAATGTGTAACAATTTGAAGAATAAACTGCTGAAACGAGCATGCTCCTACGCTGCCTCAAAGTCCTCCGTCAACGGGCTGGACTCAGAAACCACGCAGCAAAGACAGAAGTCCGAAAAGGATgaattattcgacgctcttaaaggGTTGATGACCGAAGACGATTCAAATCAAAATAGTGTTGATGAAACCAAACAagaatattatgatgatgacgatgtttTGGCGACTGACGACGATATAATAGAGACTCAAAACTCTGTGGATGCTTTACTCAATAGTATTGTTATAAAAGATAAGATTAAAATTGAAGAGCAACATTGGGACCATATTATTATAGATGATTCAAGCGATGAAGATGAGAATTTGCAGAATTTTAAGATAAAGAAAGAAGTTCCAGACGAAATTGCGGATCAGGAAGATAACACACAAGAAATAATTgaacagaataaaattgttcttgAAGAAGATTCACCTGATGCTGTTAAAGATGAAAAggatattaaaaattacattaacgCTACTCAGAAAGATGTGGAGCAAGAAAAAGATTTACAAGAAAATTTAAACAACATAGATAACTTAGGAAAAAAAATAGACCACATAGAGAGAGACATAGAATGTGATAAAGACAAAGTTACGGAATACCACATAGAAAGTATTGAAGACGAAGTTGACCACATAGAAAGTGTTAAAGACAAAGTTACGGAAGACCACATAGAAAGTATAGGAGACGAAGTTGACCACATAGAAAGTGTTAAAGACAAAGTTACGGAAGACCACGTAGAAAGTATTGAAGACGAAGTTGACCACATAGAAAGTGTTAAAGACAAAGTTACGGAAGACCACATAGAAAGTATTGAAGACGAAGTTGACCACATAGAAAGTGTTAAATACAAAGTTACGGAAGACCACATAGAAAGTATTGAAGGCGAAGTTGACCACATAGAAAGTGTTAAAGACAAAGTTACGGAATACCACATAGAAAGTATTGAAGACAAAGTTGACCACATAGAAAGTGTTAAAGACAAAGTTACGGAAGACCACATAGAAAGTATTGAAGACGAAGTTGACCACATAGAAAGTGTTAAAGACAAAGTTACGGAATACCACATAGAAAGTATTGAAGACGAAGTTGACCATGTAAAAAGTGTTAAAGACAAGGTTACAGAAGTTCACATAGAAAGTGTTAAAAACGAAATTACGAAAGTAAAAGTGGACTTAGCAATCGTGAAACAAGAACCCAAAACTAACGATTATGAAGAGTGTGTTGTAAAAGACAACGATATCAGcactgaagaaaataaaatgcaaaacaTAGATATCAAAATAGAAGTATTCGTTAAGGAAGAAAATGAAGATTATAAGGAATATGACGATGATTCTGAAAATGATATTACAAGAGAAGAAGATGCGTGTTTAGAGGAGCTTTCCAAAGTTTTCAGGGCTACGAAAGATGCTAGCACGGTAGAACTATCTGTAATCAGTTTATCTGACAACGTCGACATTAAAGAAGAGCTGATGGACGAAGACGAATATGAGGACGATATAATAATGCTTTACAATGACAAACCAACGTTCGACGTCACAAACacagtcaaaacagaaaatTCTAAAGATAATTTAACATCAGACGTTTCTAAAGACCTAAGCCCAGAAACGGATATGTCCCAGTACGAACCTGAAGTGAACATCAGTCCGGGACCCTTCAAGAGAGTGATCACCAACACCGGCAAAGAAATCATCTACCAGAAGAAGAAGACCTACCAATGCAACCGCTGCGATTTCGTCGGCGAACACAAGTCGTTCAGTCATCACAAAAGAACAATTTGCAAGAGAAAGAAGCATAGCAAGCCGAAAGGCTCACCAAAAGAGGCACCAAAAGAGACTTGGTCGAAGATGCCTTGTTCGAAGTGCGATACTGTTTTCTCGACCATGAAGTcgtatttctttcatttccacAAGCACGGGTTGCAGAAGGGTCGATGTCCCCGGTGCTCGCACTATTTCTTCGACAAGAGCAAGGCGGTGGGACATCTTACGGCTCATGTTAAGAACTCCTTCGTCAAGTTACAACTGCTTCAGAATTCTACGTGTATAACTTCGAAGGTCAACGGCCTGTTTCAGTGCAAGGTGTGTCGGGAGAAAGTTAAATTCAAGGAGTTCTTCAGCCACTGGGAGGGCCACCTGCGTTTACTGAGCGAGCAGGGCTCGGAGCCCCCGCCCGCGGTGCGCGAGCCCGACGAGCCGCCCGAGCAGTTCCCAAGTCTGCTCTCCAGGAAAAACACCAAGATACTGCTCGACCAACTAGTAGAGCCGCCGGCAACCCGTCGCGTCACAGAAAAAAGTTGCGCTCTATGTCGTCGCGAGTTCATGCGCCGCAGTGAAGTCAAGCGCCACGTCATCGAGCACCTGTGGCTGGACGCGCGCGCTCGCCAGCCGCCGTTCGCCTGCCAGCTCTGCCGACACCCCAGCAATAAGGTGCGTGAAGCGATCTTACACCCCAGCAGTAAGGTGCGTGAAGCGATCTTACACCCCAGCAGTAAGGTGTTTCAGTACAAGGATCACATGCGCAACCACGCGTCGCTGCCCGTGTTCCGCTGCGAGATGTGCGACAAATGCTTCTCCGACTCGAGCAACTTCGCCAAACACAAGAAGATGCACAATCTGCAGGGTGTCAATGACAGCCAGTTCCGCTGCGACATGTGCAATAAGTGTTTCTCCGACTCGAGCAACTTCGCCAAGCACAAGAAGGTGCACAATGTGCAGCAACTTCGCCAAGCACAAAAAGGTGCACAATGTGCAGGTATGTACTATAAGCTGTCCGTACAGGGTGTCAATGACAGCCAGTTCCGCTGCGACATGTGCAACAAGTGTTTCTCCGACTCGAGCAACTTCGCCAAGCACAAGAAGGTGCACAATGTGCAGCAACTTCGCCAAGCACAAGAAGGTGCACAATGTGCAGGTATATACTATAAGCTGTCCGTACAGGGTGTCAATGACAGCCAGTTCCGCTGCGACATGTGCAACAAGTGTTTCTCCGACTCGAGCAACTTCGCCAAGCACAAGAAGGTGCACAATCTGCAGGGTGTCAATGACAGCCAGTTCCGCTGCGACATGTGCAACAAGTGTTTCTCCGACTCGAGCAACTTCGCCAAGCACAAGAAGGTGCACAATGTGCAGCAACTTCGCCAAGCACAAGAAGGTGCACAATGTGCAGGTATGTACTATAAGCTATCCGTACAGGGTGTCAATGACAGCCAGTTCCGCTGCGACATGTGCAACAAGTGTTTCTCCAACTGCAGCAACTTCGCCAAGCACAAGAAGGTGCACAATGTGCAGGTGCTGGCGTCGTGTGACCTGTGCAAGACCAAGTTCCATACCAGAAAAAGACTAGAAGAACATATGGAGATGCATCGTCTGACGAAGCCGATCCCGTGCCCGAATTGCGAGCTGATCTTCTACAGCCAGACGACCTTCAATAAGCATTACCGGATCAAGCACCAGAAGCGGCCGCTCCTCAAAATCTGCTGGATTTGGTGGCTCAGTTTTGGTGGTTTTGGTGGCGAATTATGCGCCACCAGAACTTAA
- Protein Sequence
- MWQKNYQPHVPDYYETLIQNILSEWRTWKALVKGRSTISAYKCIICSVGWWHLSPFWDHIKIHKELNLRLEPAQHECWVVAAQEHKRCKRMFISTGINQFEGNCPKCLKLTKNTTFSRQIKDSTTAVLVMNGFEPVSRRFSGPDTGALYQLCKTDLLLKFRFTTCFGRFVHEGLCARYHRIVFQRAITIESRWRCNICDVTCVTQERYEMHLVNYHVVRSDCPIIAPLPHKCVNCDMKYLIFHLHACPMKTEKLRCKYCHRHFLNKQLLDIHMNNTKKSTNCKICKRYLNSQCMEVDHLITQHVSSFIFMYKCEQCLDHVLMTSEGALRKHRTMWHNAKEYTTSTMIVPRSSVSSSWAENVSVGDMVIAKKQNLRPVQVKKDDPETLNEMCNNLKNKLLKRACSYAASKSSVNGLDSETTQQRQKSEKDELFDALKGLMTEDDSNQNSVDETKQEYYDDDDVLATDDDIIETQNSVDALLNSIVIKDKIKIEEQHWDHIIIDDSSDEDENLQNFKIKKEVPDEIADQEDNTQEIIEQNKIVLEEDSPDAVKDEKDIKNYINATQKDVEQEKDLQENLNNIDNLGKKIDHIERDIECDKDKVTEYHIESIEDEVDHIESVKDKVTEDHIESIGDEVDHIESVKDKVTEDHVESIEDEVDHIESVKDKVTEDHIESIEDEVDHIESVKYKVTEDHIESIEGEVDHIESVKDKVTEYHIESIEDKVDHIESVKDKVTEDHIESIEDEVDHIESVKDKVTEYHIESIEDEVDHVKSVKDKVTEVHIESVKNEITKVKVDLAIVKQEPKTNDYEECVVKDNDISTEENKMQNIDIKIEVFVKEENEDYKEYDDDSENDITREEDACLEELSKVFRATKDASTVELSVISLSDNVDIKEELMDEDEYEDDIIMLYNDKPTFDVTNTVKTENSKDNLTSDVSKDLSPETDMSQYEPEVNISPGPFKRVITNTGKEIIYQKKKTYQCNRCDFVGEHKSFSHHKRTICKRKKHSKPKGSPKEAPKETWSKMPCSKCDTVFSTMKSYFFHFHKHGLQKGRCPRCSHYFFDKSKAVGHLTAHVKNSFVKLQLLQNSTCITSKVNGLFQCKVCREKVKFKEFFSHWEGHLRLLSEQGSEPPPAVREPDEPPEQFPSLLSRKNTKILLDQLVEPPATRRVTEKSCALCRREFMRRSEVKRHVIEHLWLDARARQPPFACQLCRHPSNKVREAILHPSSKVREAILHPSSKVFQYKDHMRNHASLPVFRCEMCDKCFSDSSNFAKHKKMHNLQGVNDSQFRCDMCNKCFSDSSNFAKHKKVHNVQQLRQAQKGAQCAGMYYKLSVQGVNDSQFRCDMCNKCFSDSSNFAKHKKVHNVQQLRQAQEGAQCAGIYYKLSVQGVNDSQFRCDMCNKCFSDSSNFAKHKKVHNLQGVNDSQFRCDMCNKCFSDSSNFAKHKKVHNVQQLRQAQEGAQCAGMYYKLSVQGVNDSQFRCDMCNKCFSNCSNFAKHKKVHNVQVLASCDLCKTKFHTRKRLEEHMEMHRLTKPIPCPNCELIFYSQTTFNKHYRIKHQKRPLLKICWIWWLSFGGFGGELCATRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -