Cfug009237.2
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- -
- Assembly
- GCA_951230895.1
- Location
- OX579650.1:12700181-12716360[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.0063 0.57 11.7 1.0 3 23 740 761 739 761 0.96 2 24 5.3 4.8e+02 2.5 0.1 6 23 1179 1198 1179 1198 0.90 3 24 0.45 40 5.9 0.3 1 22 1203 1224 1203 1224 0.95 4 24 8.8 7.9e+02 1.8 0.3 1 22 1264 1285 1264 1287 0.82 5 24 0.036 3.2 9.4 0.9 2 21 1297 1316 1296 1317 0.95 6 24 0.46 41 5.9 0.0 3 23 1326 1347 1324 1347 0.89 7 24 0.013 1.1 10.8 1.6 2 23 1366 1388 1365 1388 0.97 8 24 0.015 1.3 10.6 2.3 1 23 1394 1417 1394 1417 0.95 9 24 0.16 15 7.3 0.0 1 23 1441 1464 1441 1464 0.90 10 24 0.0052 0.47 12.0 1.8 1 23 1469 1491 1469 1491 0.97 11 24 0.014 1.2 10.7 0.3 1 23 1497 1520 1497 1520 0.95 12 24 0.003 0.27 12.7 1.3 1 23 1533 1555 1533 1555 0.97 13 24 0.00023 0.021 16.2 1.8 1 23 1605 1628 1605 1628 0.97 14 24 0.01 0.92 11.1 4.3 1 23 1685 1708 1685 1708 0.96 15 24 0.0016 0.14 13.6 2.0 3 23 1723 1744 1721 1744 0.95 16 24 0.11 10 7.8 0.1 2 23 1750 1772 1749 1772 0.93 17 24 0.013 1.2 10.7 0.2 1 21 1813 1833 1813 1834 0.95 18 24 0.0016 0.15 13.6 0.6 1 23 1844 1866 1844 1866 0.93 19 24 0.00014 0.013 16.9 0.4 2 23 1955 1977 1954 1977 0.93 20 24 4.4e-07 3.9e-05 24.8 1.4 3 23 1984 2004 1983 2004 0.98 21 24 0.0038 0.34 12.4 0.1 1 23 2022 2044 2022 2045 0.95 22 24 0.24 22 6.7 0.0 1 23 2067 2089 2067 2089 0.97 23 24 0.027 2.5 9.7 0.5 1 23 2095 2118 2095 2118 0.95 24 24 0.00033 0.03 15.7 0.4 1 23 2127 2150 2127 2150 0.96
Sequence Information
- Coding Sequence
- atGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCGTCGCAAATCAAGGATTGTGTGTCCATACAAATAACTGAAAAGGACGATCTGCCTTCGAAAGTCTGCAGGAAATGTGTGGATAATGTCCACAACTGGCATATATTTAAGTCAGTTTGTGAGAGGACACAAAACAAACTACTGTCTCTGAAAAAGGATGGAAGCCAACTAGAAGAGGTGAATATTAAAAGTGAGCCTCTGTCTGATGAAACATATGATGATGGAGTTGTCATTGATGGGTCCTATCCAGAGaATGCTACTTCAAGCAAAGTGCAGCCTGAAGGCCCACCAATTTTGGCTTCATTGGGACTTACACCGAGGAGTGATAAGAAATATGTAGACCCTCGCATGGACTGGCAACGAGTCCATGCCATATTGGACATCATTCAAGATGATGAAGTCATTGATTCTCTACAGTCAACTGAAGAGTTGGATGTCCTACAGCATTCCGACCACGACTCTGATTCAGAAATAGAACTGACTTCTGATGTAGAAGTTGATGATTTGGATACTACTACTGGCTACAAACGTAGAAATGGTGAAATAATATCTAAAGATCCTCTTTTAACTGAagctgaaattttaaaaaaaggcaAGGAATCTTGTTCTCAGAAAAGAAAAAGCAAGTCCTTGCAGAAATGTTATCCTGAACCCGAGCATGCCTGGCAGTTGTTGTTCACTAATGAATTACTTGAAGTGATTGTTTCTGCTACGAATGAAAAGATAAATGGAAAGAACAATTCTTCTACTCAAACCAacattgatgaaataaaaacattaatcgGTATATTGTATATCCAAGGAATAATGAGGCCCATTCATCAAAAGTCTCATGACTTATGGCACAATGACTTGGGCGTCAGTTGCATCAAGAAGGCTATGAAATATGGAAGATTTAAATTTCTTCTGGAAAATTTATGTTTTAACATGCAGGATGGTCTCGGGGACATTTCACAAAATGATATTATGAAGCGCATGCGTCAGGTATTTGATATGTTTGCCAAGAACTGTAGAGAAGCATTTGATATTGGCAGTCAAGTGGTAGTGGATGAAATCATTGTCCCAGTTTATGGACCATGCCCATTCCGTTATGAAGTAGTCAAAAACTCGATCAGAAAAAATGGGATAAAATTAACTTTACTAGTGGACCCTtcaaatttttatattagtaaTTTTGAAGTAGTTACTCTGGATTCCTGTGCACCAGAACATGTGATCACCAAATTGGTTCAACATTTAGATGGGTCTAAAAAAACTGTTGTGATGGACAGCTGGTTTAGTTCATTGCCTCTTATAACAAAACTGAAAAATGAATATAAGTTATATAGCCTTGCAGCCCTGAACACAAAGCATGAACTACTAATACCACCactttttgtttcaaaataCAGAAAGAGTGGATCTGTGTTGACGGGTTTTGTAGACGAAGATATTGCATTAGCATCTTATGTAAACAAGGAGTATAAGTCCATCAATGTACTGACAAATGAGCCTATGTTATACAAAAAACAGCCACAGTTCAGATCAGGGACAGCTGTCTGGCAGTACAAGAAAAACTGTTCTGCAGTAGAAGTCGTGGATGTCCTTATGCATTATTACACCACAATGCAAAATTGTAATGATTGGgctttgtgtttatttttcacGATGCTGAACATTGCTTCAGTAAACGCTCAAGTAATATGGAGTGCGCATAACTCGTCGGCAGTGTCACAACGTCGTATTTTCATCAGAGATTTGGCTGCAAATCTTTTGAATGGTGTAGTGCAACCCGCCGGAAATGATGCGCCGGAGCGAAAGCTGCTGAGGATCCGAAACTCTGTCCAAGTGCAGGGTACATTGCCTGCTGGTATCAGAAAACTCTGTGTTATTTGTACACAAACTACAAAAAGGCAACGCAAGACAAGATTCTATTGCAACAAGTGCTGCCTGCCTgGAATCGAGAGCGACAAGGATGAAGAAGAGGAGTTTGACGAAGAAACGAGCGAGCAGCCCGCCGCGTCGTCATCGAAAGTGTCTAACATGCCCGAGGTGTCCATCACGGTGATGCGGCCCACGGGCGAGACGCTGCAGTCGCGTCAGGGCATCCAGCAACTCGCCTCCAAGGACTGCCTCGTCTGCGGCCGCTCTTACAGGTACTCTCACAATGCTCGGCGACACGAACTCACCGCACACAGCTTCGACAGATACACCAACAAAGTTACCGCCCCTAAGAAATCTTTCTCCCGTATGCAACCGAAACTCAGGCCAAATCCGTTCAATCCCAAAGCCAGACTAATGCCTAATCCTATCAGTCACAAAATGCAACTTATTCCTCCCAAAGCCCAACCACAAAAGATGACGCAAAGGATTATCCCACCTAAACCTATACCGGTTAAACCTAATAAAACTCAACATAACAATCTACCCTATCCTCTTCGTATTAAGGCTCTAAAAGACttgcaaattaaaaagaaagagCCGCAAATCTTAAAAACTTTGCTTACAGCGAAGCCAGAAGTTTTAGTGTCGGAACCGGAAATTATGAATTCTGCTCCAGAGAGCCCAGAAACGTTGATATCTGAACCGGAAATAGCTTCATTCCAAGTTGAGACTATTTTATCCGAACCCGATGACCAAAATGGTGGTGATGAAGTGGATGGAGACCTTTACGGTAGTCAAAACCAAGCTACCTACGATACTCTTGATATGGAGTCCGACAATGAAATAGAAATCGCTCgtcaaaaagaaaatattgaagCTGACGTTGAAGGTGACGAACAAGATGAAGAACATGACGTAGATGAAGAGATGCATGATGGGGAGGATAATGTTGAGGACAATGACAACGAAAAATATTCCAACGAAGACGAAGGAGAAAATAATGACGATGACATGAATGAGGTTAAATCTGATGAGATAAAAGGAGATGCAAATGGGGAACGTGAACACGAAGAAAATGAAAATCATGAGGAGAATGAAGATGATGAAGATCTGCCACCGGAAGGATTGGCTCCTGTTGTTGAGATAAATGAGGATATGCAGACGAATTCTTACAATAGTGAAGCTAATGAGGAGGAAGATGATACACTCGACGATACGGTCGATCCCAATGACACAGTTGATCCCAACGACGCTGTGGATCCAAATGATACAGTCGACCCTAATGACACAGTAGATCCCAATGATACAGTAGATCCTAATGATACAGTAGATCCTAATGATACAGTAGATCCCAATGATACCGTAGATCCCAATGATACCGTAGATCCGAATGATACCATTGATCCTAATGATACTGTAGACCCCAACGATACTGTCTATGACGGTGAATCTGAAGTTAGGGAATTGGATCCTAATAAACAATACGTAACTAAAGCTCAAAGAGAATTCATTGCTAAATATAGTGATATTATTCAGCAAATCAATACTAAGCGCTGTATTTGTTGCGACAAAGAATATCCCCGCAGAAAAGCAGTCATACAACATCTGCAGAAAAATGGACATAAGGTACCTAAACACACTTGCTACAATTGTGTAGTAACATTTGGCCACATCGGTGCTTTATTGAGCCACATGAGGTCTAATTCATGCACAGACTTATGGAAAATTATCTACAATGCAAGTGGTATTACTGATGATATGGTTCTGGAAGATGAACCTAAAAAagttcagtacaaagatattttcaATGCAAGGTCATATGCTTGCAAATTGTGTCCAGCAAAGTTTCAATTGAAGCAGTTTATTATGAAACACGTGCTGGACGTCCATGAAGATGGCCAATCTCTCGTGCCTCTCAGGTGCGTGCATTGTAGAGCCAGATTCAAAGATAGAGTACTGTGGAAAAAACACATCCGTAATGGTGACTGTACTGTGTATATTGCTTGTGATTTGTGTTCAGAGACATTTGTTAACATGCAAGATTTTAATGATCATGCTCTCGCTGAGCATGCTGGTAGCTTCGACCAGGGCAATGAGAGTAAATGCGTCGACGGTCGAATGACAGAATGTCCAATTTGTAATAAGAAACATACCAATTATCTGAATTTGGTACGCCATTTAAAGACTGTGCATAATGAAGAAAAGCCTCACTACTGCAAACATTGCGACGCCAAATTTGAACTAACCGCTGACCTTAATAAGCATATTTATATGGCTCATTCTACTGTTGGTTTGGAACCCACGGAACCAAATATGTCACTTGTCAAAGAAGAGGTAGAAGAATATCATTATTCTTGTACCGAATGTAATGCTATATTTGAAACAGTTGATGCTTGGACTGACCACCAGGTAGCGGAGCATAATCAAGTTGCGCATTATTGCGATCAGTGCGAAAAAAAGTTTTTGCGACCATCGGAACTAGCAGAACACAAAAATACACATTTGCGTGTTAAGTTCTATCCTTGTAGTATATGCACTAACTCTTACAGCACTCCGCAGAAGCTTTCTGATCACGTCCAACAATCGCACCCAGGAGCCGGGGCTCTTGTGGCCGGAGAAACTGAATTTTTCTGTGACATTTGCATCAGGTCATTTAAAAGCAGACAAGCTTACTCCAACCATATGCGTATTCACGCTAAAGTGCCGACCACGAACAGGCGGCCTGGTGATACTAAAATGGGTTTCGCTCCACAGATTGTAGGAAAACCTATCAAACAATTTAACGTGACACCTACTGCAAGTCTGGTTTTTAAACCGAACCTAAATGTTCCTAATGCTCCTTATTCTTGTGATATTTGTGGAAAAggatttatgcacaagaaaaaTATATGGAAACATAAAAAGGTGTTGCACGCCGATCTTCTTAATGATCGTAATGATAGCGAAGAAAATACTATGCACGCGTCCACTGAAGAAGATGATAATATCGATGAAAATGGTGCTCTCACTACACCGCAGTTTAACAGTTTCAATTTTTCCAACTTAGTGAATAATGTGCAACTAAAATCGGAGCAAAAACTGTACAAGTGTCACCAATGCCCACAGCAATTTTCTGAACAAATACATATGACAAAGCACAAGCTCTCGGCGCACAAAAAATGGAATGAACAGTCAAGTCAAGGAGGCAGGTCTAATTGCACAATATGTAAGATATCATTCTCAGACAAAAAGTCTTACTATCGACATAGGAAGAACGTGCATAAGTCGACGACCCAGATGTGCAAAATATGTGGAAAACCACTAAACTCAACACTGGAGCTTTATGAGCATTTGAAAGCAGCTCATGCTCGAGAACTCTTAGGATATAACGCTAACCAAGGTTCTAGCAAATCTCCTACACAAGAGTTAGAGGATTATGAAGTAGATCAGGAAGCTACAGATCCTAGTGTAGACTATCAGGCTCGCTACCCTTGTGATACTTGCGGTAAGCAATTCGTTGGGCTGCTCGCTTTACAGAACCATCAGTGTATAAACCAAATGTCTTCACAACCGCAAACCTTTGATTGCGAGATCTGTCACAAGagttacacttccatagctgcACTGAAGAGCCACCGCGGATGGCACTTGCGTTCACCAGACGGGAAGGCGGCCGCCAATAACACCGGACTGTGGATGCCGCAACATAAAGTAACCAGCAAAGTGAGCAAACATGAAGTCGTTGATCACGGGGTTACCACCCGAGCCGCCACAGCCACACCGACCGCGTCTAAAAGAAGACTACCACCAGAAGTGGAAGTCACTGTTGTCAATCCTAACAAAAAACTACGGTCAGATGATTCAGTCGAAATGGATCATCTGAATAACTCTTCAAGTGGCCTCGAAGATAAGTACTGCACTATTTGTGACAAAGAATTCACAAAGCGTGCAGCTTATCAGCGTCACATGGACGAAGTTCACAAGCCTAACTCTGTTTTCTGCCCGGTTTGCGATAAAAGTTTTACGCGAAAATCCACTTTACTCGTTCACATGAAGAAGCACTACGGTGGCGGGGAGGGTAGCTCCTCTACAACGAACCAACTAGACGAGGATTACGCGTGTGAGGTTTGTGGAGCTCAGTACGATAGCGCGCAGGCTTTGCGAGCTCACCGCTTGAGGCACCATGGGGAGGAATCCGACCACGAGTCGGAGGACGAGGGCAGCGTCGGCGCCGCCGCGCCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGGGTGGCCACGCCGCGCGACCTCATCGCGCATCGCACGATGCACGCCACGCCGACCAAATACTTCTGCAACATTTGCAAAGTCTACTTCGCTAGAGCACTGGACTTGTCATCGCACACGCGCGCGAGACACGCCGATAGCGAGAAAAGCGCCATGTTCCCTTGCGCAATGTGCGACCGCTTCTACATGAACAAGAAGAGTTTGCAACGGCACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASQIKDCVSIQITEKDDLPSKVCRKCVDNVHNWHIFKSVCERTQNKLLSLKKDGSQLEEVNIKSEPLSDETYDDGVVIDGSYPENATSSKVQPEGPPILASLGLTPRSDKKYVDPRMDWQRVHAILDIIQDDEVIDSLQSTEELDVLQHSDHDSDSEIELTSDVEVDDLDTTTGYKRRNGEIISKDPLLTEAEILKKGKESCSQKRKSKSLQKCYPEPEHAWQLLFTNELLEVIVSATNEKINGKNNSSTQTNIDEIKTLIGILYIQGIMRPIHQKSHDLWHNDLGVSCIKKAMKYGRFKFLLENLCFNMQDGLGDISQNDIMKRMRQVFDMFAKNCREAFDIGSQVVVDEIIVPVYGPCPFRYEVVKNSIRKNGIKLTLLVDPSNFYISNFEVVTLDSCAPEHVITKLVQHLDGSKKTVVMDSWFSSLPLITKLKNEYKLYSLAALNTKHELLIPPLFVSKYRKSGSVLTGFVDEDIALASYVNKEYKSINVLTNEPMLYKKQPQFRSGTAVWQYKKNCSAVEVVDVLMHYYTTMQNCNDWALCLFFTMLNIASVNAQVIWSAHNSSAVSQRRIFIRDLAANLLNGVVQPAGNDAPERKLLRIRNSVQVQGTLPAGIRKLCVICTQTTKRQRKTRFYCNKCCLPGIESDKDEEEEFDEETSEQPAASSSKVSNMPEVSITVMRPTGETLQSRQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKVTAPKKSFSRMQPKLRPNPFNPKARLMPNPISHKMQLIPPKAQPQKMTQRIIPPKPIPVKPNKTQHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSAPESPETLISEPEIASFQVETILSEPDDQNGGDEVDGDLYGSQNQATYDTLDMESDNEIEIARQKENIEADVEGDEQDEEHDVDEEMHDGEDNVEDNDNEKYSNEDEGENNDDDMNEVKSDEIKGDANGEREHEENENHEENEDDEDLPPEGLAPVVEINEDMQTNSYNSEANEEEDDTLDDTVDPNDTVDPNDAVDPNDTVDPNDTVDPNDTVDPNDTVDPNDTVDPNDTVDPNDTVDPNDTIDPNDTVDPNDTVYDGESEVRELDPNKQYVTKAQREFIAKYSDIIQQINTKRCICCDKEYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTDLWKIIYNASGITDDMVLEDEPKKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSLVPLRCVHCRARFKDRVLWKKHIRNGDCTVYIACDLCSETFVNMQDFNDHALAEHAGSFDQGNESKCVDGRMTECPICNKKHTNYLNLVRHLKTVHNEEKPHYCKHCDAKFELTADLNKHIYMAHSTVGLEPTEPNMSLVKEEVEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHYCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPQKLSDHVQQSHPGAGALVAGETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRRPGDTKMGFAPQIVGKPIKQFNVTPTASLVFKPNLNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMHASTEEDDNIDENGALTTPQFNSFNFSNLVNNVQLKSEQKLYKCHQCPQQFSEQIHMTKHKLSAHKKWNEQSSQGGRSNCTICKISFSDKKSYYRHRKNVHKSTTQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSPTQELEDYEVDQEATDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQMSSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDHGVTTRAATATPTASKRRLPPEVEVTVVNPNKKLRSDDSVEMDHLNNSSSGLEDKYCTICDKEFTKRAAYQRHMDEVHKPNSVFCPVCDKSFTRKSTLLVHMKKHYGGGEGSSSTTNQLDEDYACEVCGAQYDSAQALRAHRLRHHGEESDHESEDEGSVGAAAPGEFTCAQCGDGVATPRDLIAHRTMHATPTKYFCNICKVYFARALDLSSHTRARHADSEKSAMFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -