Cfug012196.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Carpatolechia fugitivella
Gene Symbol
-
Assembly
GCA_951230895.1
Location
OX579653.1:6310517-6333696[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.011 0.96 11.0 2.9 1 23 406 429 406 429 0.96
2 25 0.47 42 5.8 3.1 1 23 598 620 598 620 0.94
3 25 2e-06 0.00018 22.7 0.2 1 23 625 647 625 647 0.98
4 25 2.4e-06 0.00022 22.5 0.7 1 23 653 676 653 676 0.96
5 25 3e-07 2.7e-05 25.3 1.2 1 23 682 704 682 704 0.98
6 25 1.6e-05 0.0014 19.9 3.0 1 23 710 732 710 732 0.99
7 25 4.2e-05 0.0038 18.6 2.1 1 23 747 769 747 769 0.99
8 25 1.6 1.5e+02 4.1 2.5 7 23 781 797 781 797 0.96
9 25 1.6e-05 0.0014 19.9 3.0 1 23 812 834 812 834 0.99
10 25 1.6 1.5e+02 4.1 2.5 7 23 846 862 846 862 0.96
11 25 1.6e-05 0.0014 19.9 3.0 1 23 877 899 877 899 0.99
12 25 1.6e-05 0.0014 19.9 3.0 1 23 914 936 914 936 0.99
13 25 1.6 1.5e+02 4.1 2.5 7 23 948 964 948 964 0.96
14 25 1.6e-05 0.0014 19.9 3.0 1 23 979 1001 979 1001 0.99
15 25 1.6e-05 0.0014 19.9 3.0 1 23 1016 1038 1016 1038 0.99
16 25 1.6e-05 0.0014 19.9 3.0 1 23 1053 1075 1053 1075 0.99
17 25 1.6e-05 0.0014 19.9 3.0 1 23 1090 1112 1090 1112 0.99
18 25 0.00038 0.034 15.6 5.2 1 23 1127 1149 1127 1149 0.99
19 25 1.6e-05 0.0014 19.9 3.0 1 23 1164 1186 1164 1186 0.99
20 25 1.6e-05 0.0014 19.9 3.0 1 23 1201 1223 1201 1223 0.99
21 25 0.00045 0.04 15.3 3.7 1 23 1238 1260 1238 1260 0.99
22 25 1.6 1.5e+02 4.1 2.5 7 23 1272 1288 1272 1288 0.96
23 25 1.6e-05 0.0014 19.9 3.0 1 23 1303 1325 1303 1325 0.99
24 25 1.6e-05 0.0014 19.9 3.0 1 23 1394 1416 1394 1416 0.99
25 25 9.9e-05 0.0089 17.4 0.2 1 23 1450 1472 1450 1472 0.98

Sequence Information

Coding Sequence
ATGAGGATCATTGATGCGCATCTCCTTGAAGAGAAGATGGACGAGGCGGTAACGCACTACATAAACTCGCACCCGTCAGGAGAGCCAGTGCATGTAGATGGCCCAACATCCCTGAATGTCCAAGATGAGGTCGGCAGAGTGGTCACTGTCATGTCTGGCCAAGGATACTCTTCACAGATGAGCCGGCATGTGCCAGTGAGTGAGGCAGTGGAAGGAGGCCCATGGAATGAGGAGTTGCTGGATCCAGAGATGAGGCTGGCTGCCTTGGTGGCTCATCTGGCTCACCAGTCCAGGACATCACATCACCAGACAACATCTGTACATTCTAAGGTATCGTCAGTAAGAGATGTGGATTCCTCAGTAATTTTGGATTCGTCATTGAAGCTGTTAAGTAGCCAACCTTTGGACTCCCAATCGGATTCAATTCAAGTAGTCCAAGTGCCAGCACTGCCTCCCCTGCCACCGTTGCAAGGCATCTGTTCGCGGAAGCACACGGAGACGTACTGGTACCATCCTAAGGATAAGAGCTTTTTAAAGAGTGAAATATTAGCTGAATCGCAGTCGTCGATGATAGAACTGAGCGCCGGCGCGTCGCCCGCGCACATCAAACATCAGAACAAGAAGAGCTTGCCGCACAAGAAACGAATATCGCGGAAACTGAAACGGAACGGGAACTGTACTCCTCAACAGGATATAGTGGTGATAAATTGCACGGACGAGATGCCTCAAGAGGAGATATTGCCCGACAACTTCGTGACGGCCGTCCAGCACCAGGAGCATCTGGCGGAGGACACGCATCATATCGCGCACGAGGTGCGGCCCGTGCTCATCTGCCAGCTGTGCGGAGACTTCTACGGCGAGGATCAGCTGAAGTTCTACCAGCATCTGAAGCAGCATTACGAACCCCACGGGACCATCGTCATCGAGAACCCCGTTACCGACCTCGCTATTGATAAGATGACAAACACCTGCATAGTGGACAGCGGCGCGACTCTACCGGACTCGATAGTGGAGCTGTCATTGGAGAATACAGTGCCCAAAACCATGTACCAGCCCGTTGACAAACATATCCTGTACGCTTCTTCCACTAGCGATAAGACACTTTATACTAACAGGATACAATATTCGATGGCAAGTATGGACAAAGAGCCAGTGGTGCCAACATCAGAAGCGGAGAAAACTGACATCTACGACACGTTGGACAAACTGGAGATGTACAGCTGTGCCAAGTGCAATAAACAGTTTAGGAAACAGAAACAATGCGAGGCGCATATAAGAGAGGCTCACTCCAATTCCAAGCTGGAAGACATGGGCGAGTTCAGCGAACCCGAGGACTTAATGGAGGGCATCCACGTGGCCGTGCCGGAGGGGGGCTCGGCGGGGTCGGGCGGCGAGGGCGGCGAGGGGGCGGAGGGCGAGCAGTACGAGCAGACGCTGCTGCCGCACCTCACCGTCGAGAACGGGACCGTGCACCAGGAACACGCGCGACACTGGTACCTGCGCAGCGGTCCGGGGGGCGGAGCGCTAGCGGCGTGCGGCGCGGACGGCGCCTATTGCCCCGTGTGCCCCAACACCACACACCATGGACAGCTCAAAGAGGAGGTCCTCCAAAGGATATTCGAGTCGGAAGTCGCGAATGAACCTGACCACTTCCCAGACAATATCATCCACGAACAAGAAATACCGGCAGAACCGGAGTCGCAACCTGAACCCGAACCGGAAGCGGAACCGGAACAAAGCCAGCAGCAAGAGGAGATAAAAACAGAACCAGGAAAGAAGAAGTTGAAGAAATTCGAGTGCATTCAGTGTGGCCGTATATTCCACCATAGGAACAGTTTGTTGTATCACGTATTGTCGCATCGAGGGAAGCAGTACGAGTGTATGGAATGTGGGAAAGAATTCTACACTCCTAATGCTCTTAAGGTCCACATGCGCCTGCACAGCGGCGACCGTCCGTACAAGTGCGACGAGTGCGGGCGCGAGTTCCGCCAGTGGAGCGACCTCAAGTACCACAAGATATCGCTGCACACCACGCAGAAACACTTCAGATGCGACTACTGCGACAAAGCGTTCGCGCGCAAATACTCGCTCAACGTCCACCGCCGCATTCACACCGGCGAGAAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCGAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCATACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACTGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGTTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGTTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACACTCATAATATACAGGGAGTCCACAAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCACGCCAGCTCCTACCGCGCCGCGCACATGCGCACGCACACCGGTAACTACACTcattatatacagggtgtccacaAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACActcataatatacagggtgtccacaAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACACTCataatatacaaggtgtccacaAGACCTTCCGCGCCAGCTCCTACCGCACCACAGGGTGTCCACAAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGACCTTCCGCGCCAGCTCCTACCGCACCACAGGGTGTCCACAAGAACTACAAGTGCGACTACTGCACCAAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCACACCGGTAACTACACTCataatatacaaggtgtccacaAGACCTTCCGCGCCAGCTCCTACCGCACCGCGCACATGCGCACGCCCACCGGTGACAAGCCTTACAAGTGTTCGAGTTGCGAAAAAGCATTCCGAGTGGGCGCTGACCTGCGCCGCCACATGCTGATACACGAGCGTGTCCGCAACCGCACCGACGAACAAAACAAACCCAAAGAAGATAAACCCAAAAAGAACCCGCTGAAACCCGAACCCAAACTCGAGCCGAAAGAGGAACAAACTACACCTAAACCGAAGAAGATCGCAGTCGCGTCCACCACGCGGCCGCCGTTACAGAAAAATATAGAGAAAAAGCCGAGGCCTAGAAAAGCGCCGGCCAAAAAGGGCGGAGCGCCAAACGTCACTGTCGTGCAAAGTGCCAACCGAGATCAGTACAAAATCAACCCAGAATTCGCAAACGCTGAAGTTTTCGATACACGGCAAGACTACGGCAAATTCAAAGAGGTTTATTCAGAACCGAATACGGTATATGACAAAGAATATAGTAAGCCAAAGGACTATAATGAACAAGTCATAAGTTATAAAGGCGTCGTGCAGGATAGAGAACTAGCTACACTCAAACCTATTTATAGAGACAGTGTGGAAACAGTAACTGAAAAACCTGTAGTGTACACTCGGACAGAAAATACCGATGGTAAAATGCACGTGTACACTCACGTGGAAAAATCTGGCTTAGTATCGAACACAATAGGAGATATAAGAGTACTGGAAAGAGATAGAGGAGATTTGCACGGAGAAACAATAGAACATGGTTTCTTAGAAAATCTAACCGCGCTTTATAATATACCTGCCGTATGA
Protein Sequence
MRIIDAHLLEEKMDEAVTHYINSHPSGEPVHVDGPTSLNVQDEVGRVVTVMSGQGYSSQMSRHVPVSEAVEGGPWNEELLDPEMRLAALVAHLAHQSRTSHHQTTSVHSKVSSVRDVDSSVILDSSLKLLSSQPLDSQSDSIQVVQVPALPPLPPLQGICSRKHTETYWYHPKDKSFLKSEILAESQSSMIELSAGASPAHIKHQNKKSLPHKKRISRKLKRNGNCTPQQDIVVINCTDEMPQEEILPDNFVTAVQHQEHLAEDTHHIAHEVRPVLICQLCGDFYGEDQLKFYQHLKQHYEPHGTIVIENPVTDLAIDKMTNTCIVDSGATLPDSIVELSLENTVPKTMYQPVDKHILYASSTSDKTLYTNRIQYSMASMDKEPVVPTSEAEKTDIYDTLDKLEMYSCAKCNKQFRKQKQCEAHIREAHSNSKLEDMGEFSEPEDLMEGIHVAVPEGGSAGSGGEGGEGAEGEQYEQTLLPHLTVENGTVHQEHARHWYLRSGPGGGALAACGADGAYCPVCPNTTHHGQLKEEVLQRIFESEVANEPDHFPDNIIHEQEIPAEPESQPEPEPEAEPEQSQQQEEIKTEPGKKKLKKFECIQCGRIFHHRNSLLYHVLSHRGKQYECMECGKEFYTPNALKVHMRLHSGDRPYKCDECGREFRQWSDLKYHKISLHTTQKHFRCDYCDKAFARKYSLNVHRRIHTGEKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTETFRASSYRTAHMRTHTGNYTHNIQGVHKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYCTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFHASSYRAAHMRTHTGNYTHYIQGVHKTFRASSYRTAHMRTHTGNYTHNIQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKTFRASSYRTTGCPQELQVRLLHQDLPRQLLPHRAHAHAHRPSAPAPTAPQGVHKNYKCDYCTKTFRASSYRTAHMRTHTGNYTHNIQGVHKTFRASSYRTAHMRTPTGDKPYKCSSCEKAFRVGADLRRHMLIHERVRNRTDEQNKPKEDKPKKNPLKPEPKLEPKEEQTTPKPKKIAVASTTRPPLQKNIEKKPRPRKAPAKKGGAPNVTVVQSANRDQYKINPEFANAEVFDTRQDYGKFKEVYSEPNTVYDKEYSKPKDYNEQVISYKGVVQDRELATLKPIYRDSVETVTEKPVVYTRTENTDGKMHVYTHVEKSGLVSNTIGDIRVLERDRGDLHGETIEHGFLENLTALYNIPAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-