Cfug021756.1
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- -
- Assembly
- GCA_951230895.1
- Location
- OX579661.1:14961170-14963575[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 2.6e-05 24.8 0.0 2 40 15 53 14 58 0.88
Sequence Information
- Coding Sequence
- ATGGtgagaaattataaaaaaaaacgactatCAGAAACAAATGAAGATGACATTATTAATGCTGTACAGCAAGTGATAGATGGCAATATGAAACTAAGGCAAGCTGCCGATGCTTATAATGTAAAACCCAATACATTAcactatagaataaaaaaacataaggaaGGAGCAACGCTCAAGTCTGTAGATTACTCGACAAAATACTCAGTTGCGCAAGTTTTTACTAAGGATGAAGAAAGAATGTTAAAAGAGTATTCAATCACACGATCAAAAATGCACTATGGTTTGACATATAAGAAGTTGAGACAGCTTGCATTTGAATATGCTACAGCGCTAGGAAAATGCCCGACAAAATGGATTGAAAATAAGGAAGCTGGAATAGATTGGCAGAAAGGTTTCATAAAGCGAAATAAAGGCCTATCTCTCCGAAAACCGGAAAACACAAGTCTGTCGCGCTCTACGAGTTTTAACAAACATAATGTTTCGAAATTTTTTGACAACTACGAAAATgtcttgaaaaaatataattttacaccTGACAGAATTTATAATCTTGATGAAACTAATATAATGACAGTTGTACAGGCACCCAAAGTTATAGCTCAAACTGGTACTAAGCAGGTAGGACAAAGTGTTTCTGCAGAACGTGGACAACTGATTACTATGTGTGGGATAGCAAATGCTATAGGAAACTGTCTTCCTCCTGTTTTTATATTTCCTCGAGCAAGATTCCACGAATCAATGCTTACCGGTGGTCCTCCTGGTAGTGTAGGTTATGCTAACAGTCCAACCAGCGGATGGATGACTGGACCATTGTTTGTCAAAGTCTTAGAACATATTAAAACTCATGTCAGATGTTCAAAAGATGacccaattttaattttaatggatAACCACGAAAGCCACTGCACCATAGATGCAATTAACTATTGCAGAGATAATGGAATGGTCGTGGTAACATTTCCACCACATTGCACTCATCGCCTGCAACCCTTGGATGTAGCCGTCAACGGTCCTTTCAAACAAAAGCTATCAGTGGCCCAAAACGATTGGTTGGTAAATCATCCTGGGAAAACAATAACTATTCATGATTTGGCTGGAATAGTTACACACGCGTATACTGCTTCGTATACTATTCGCAATGTAGTTTCAGGATTTTCCAAGCCAGGCTTATATCCGTTTTCTAGAAATGCATTTTCAGATGATGATTTTGAATGCGCAGAGGTCACAAATCGTCCTGAACCAACAGTCTCCACCTCTGTAGCCACTGATAATGTTCAGAATTCTTCTGGACCATCTGAACAGTCGCGAATGTCTCATACAGTTCGGTCAAGTCATCCTGTGCTAAGAATTTCTAGTGCGGTAACTGCTAACGATTCTCAGGGTACTCCTGAAATGATAACTGGACAGTCGCAACTATTACCTATTGTAGCCGAATCAAATCCTTCTGCGTCAACAATTTCTAATGCTGTGACTACAGATAATTCTCATGATTCTTCTGGGTTGCCATTGGAACAGACAGAACATTCACCTGTTCATTCATCGATAACTCCAATATCTTTACATACAACTCAAACAGTATCTTCCATACCCATGCCAGATATTACAGATGCTGATTCTGAAATTGTTCAAagtgaatttgaaaatattattggaAATGAAATCCCGACAACAGCCAAAACAGCTCATGTAGCTTTAACGCCTGAAAGTGTGTGGCCTTTACCTAAAGCTCCACCTCGAAACGAATCTAGTAAAGGCAGAAAAAAAGGCAAATCTCGTGTTCTTACAGATACCCCTGAAAAAGACGAAATTTTAAAGGCTTATCTTGAACGCCAGGCTCGTCTTAAGAAATCAGACCATAAAGTTACAAAGAAAAAGGCTAAAAAAGTTTCTAACCAAATAGCTTCAAAGTCTAAAGGGAGAATGAACCTTAAAAGCTCGAATCTCAAATCTACTAAGCGTAAATGTACCAAAGCGGTTCTTGATTTTTCTTCAGATGAGACTGACACTGAAATGATGCTGGAGTCTGAGGAAGAAGCAGTAATGAGTTATGAAGAAGATGATATTACAGATAATTGTGAAAATGTAGATGAAAATAGACTTGACTGTGGTACTATTAAATCTGGAGATTATGTGTTGGCTCGATTTtcatcaaaaaataataaaaggaatCTGGCTTTTGTGGGAATAGTTTTAGATGAGCAGAAAAATCATTTTACTGTGAGttttatgaaaaagaaaggaagcttttacaaattttatttcccTGAAATAGAAGACAAGTGCTTCGTCAGTATTTCCGATATTATAACAAAACTGCCTCCCCCAATTGAGTCTACAGGCACTTCACGTACTGCGGCAATGAAAGCCTTTAAATTCGATTTTTCCAAGTTTAAGTTAGGTTAG
- Protein Sequence
- MVRNYKKKRLSETNEDDIINAVQQVIDGNMKLRQAADAYNVKPNTLHYRIKKHKEGATLKSVDYSTKYSVAQVFTKDEERMLKEYSITRSKMHYGLTYKKLRQLAFEYATALGKCPTKWIENKEAGIDWQKGFIKRNKGLSLRKPENTSLSRSTSFNKHNVSKFFDNYENVLKKYNFTPDRIYNLDETNIMTVVQAPKVIAQTGTKQVGQSVSAERGQLITMCGIANAIGNCLPPVFIFPRARFHESMLTGGPPGSVGYANSPTSGWMTGPLFVKVLEHIKTHVRCSKDDPILILMDNHESHCTIDAINYCRDNGMVVVTFPPHCTHRLQPLDVAVNGPFKQKLSVAQNDWLVNHPGKTITIHDLAGIVTHAYTASYTIRNVVSGFSKPGLYPFSRNAFSDDDFECAEVTNRPEPTVSTSVATDNVQNSSGPSEQSRMSHTVRSSHPVLRISSAVTANDSQGTPEMITGQSQLLPIVAESNPSASTISNAVTTDNSHDSSGLPLEQTEHSPVHSSITPISLHTTQTVSSIPMPDITDADSEIVQSEFENIIGNEIPTTAKTAHVALTPESVWPLPKAPPRNESSKGRKKGKSRVLTDTPEKDEILKAYLERQARLKKSDHKVTKKKAKKVSNQIASKSKGRMNLKSSNLKSTKRKCTKAVLDFSSDETDTEMMLESEEEAVMSYEEDDITDNCENVDENRLDCGTIKSGDYVLARFSSKNNKRNLAFVGIVLDEQKNHFTVSFMKKKGSFYKFYFPEIEDKCFVSISDIITKLPPPIESTGTSRTAAMKAFKFDFSKFKLG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00275202; iTF_00275201; iTF_00275203; iTF_00275198; iTF_00275200;
- 90% Identity
- iTF_00275201; iTF_00275202; iTF_00275203; iTF_00275198; iTF_00275200;
- 80% Identity
- -