Cfug030313.1
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- clz9
- Assembly
- GCA_951230895.1
- Location
- OX579671.1:6179897-6183037[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-14 3.3e-11 43.7 0.0 1 36 13 48 13 57 0.90 2 2 3.4 3.2e+03 -1.1 0.0 20 32 927 939 926 939 0.85
Sequence Information
- Coding Sequence
- atggaatcaaaaaaaaaatacgagcgCTTTCGATATACTCCAGAAGCCTTAGAAAAAGCTTTACAGTCAATTATAAATGGTGAAACTACACTTAACAAAgccagtaaatattataatataccgAAGTCAACGCTACacaataaactaacaaataaagTTCCGAGGGAAAGGAAGATGGGACCAGCTACTGAGCTCACTAGTAATGAAGAAGCTGAATTAGCTGAATGGATACTTAACAAAGCAAAATTAGGTTTTCCTATGCATCCAGATGATGTAGTAGATACTGTCGAAAGTTTCCTGAACGCAAATAACCGTGTATCAAAGTTCACTGAAAACAGACCTGGAGATAAATGGCTTCAACTATTTCTTAAAAGACATCCTGATGTTACCAAACGAAACTCCGAATTAATATCTAAAGCTAGAGCGGCAGTCACTGAGGAAGGTATCAGGAAATGGTTTTTGGAATTGGAAGAATATTTAATAGAAGAAAATgccatagatataataaatgATCCAAGCCGAATATTCAACTCCGATGAGACTGGAGTCTTATTGTGCCCAAAAACCGGATTAATATTAGGgcctaaaaattataaaaacacttaCCAAATTTCACATGGAAAGGAAAAGGAGTCGGTAACAGTTCTCTGCACGTTCTCTGCAGACGGTAACAATGTACCACCCTTCGTAGTTTATCCATATAAAAGAATGCCTCCTGCTGTTGCAAAAGAATTCCCAGATACTTGGTTTATTGGCAGATCAGACAGTGGATGGATGGTTTCAGCAACATTTTTTGCTTACATCAAATTGTATCACGAATGGCTTCTTGAAAACAAGATTAAATTTCCCGTAATTCTTTTTTTGGATGGTCATAAATCTCACATAAACAGAGAAATGACAACTTTTTGCAAAGAAAAGCGAATATTACTGTTTTGTCTGCATCCAAATGCCACCCATATTCTGCAGCCGTGTGATGTTGGTATCTTTGGACCTATAAAGAAGTTTTGGAAAAAAGTGGTACGAAAACATAAACAAGCTACAACTGCCCCTGTAACAAAACAGAATTTTGCTCCAATATTCAAAAAAGCCTATGATAATGCAGTAAAACCAGAAactattaaaaattctttcagaGCGTGTGGTCTATTTCCTGTTAATGCTGATGCTGTAGATTATTCAAAATGTATAAATACAAGAAGGCAAGAAATCGCAGAAAAGACGCGGCAAAACAACATGTTGACTGATTTTGATGAGCAAAAGGATGATATGAGAAGTACAATGAAAGTTATAGAAAACGAAATTGATCAAATAACGAGACTTGAGTTCCTAAAATATTACCAAATTAAAAAATCCTATGTTCATCCACTTTTTGATCTTTGGGCAAAATGTAAGGCAACACTTGAAAATGATCCTAATCGTTACCAAAATCgagttgaaaaagaaaatgtctTACCTGAAGTTCCACTTGATCTCTCCAACTCGTCTACAGTTGAAGTAACTAGTCAGCGTGCAAGTACTGCGACGCTAGTTGTAAATGATTCCAACTCAGGTGACGAAAACCCCAACATTGAAACTATTGAAACAGTAGTACAAATCCACGAACATGCAAATTCAAATGCGATCGAAAAAGATAATGAAGATTTAACCGCAACATGTACTCCTATTCTTAACGATACAGACTTATTTGGAGAAAAAACAAcatatgattttgataaaacggACGATATTATCGATTATATTGTAGATCATGATACTTCATTGCCTTTATTAGTAACAATACCACCGCACCACAAAACAATGGAAATAGATGCTGTCACAGATGGTGCTTACTGTAATACACAAAAAGGGGACAATACTGCTGAGAGTAACTTTAGTCCAAGCAAACCTCCTACTGTATCTCAAACTTCTGCAAAATCAGTGTCAAATATGGACATGTCAAATTCTTCAGTTACTGTAATTCCAGACGTTCTTGAAATTGGCTCGATTAATACTGACTCGCAGAACTCAAAAATATCTCTAGACCTTGATGCTATCACAATGACCCGAAACAGAAATTCTGAAAATGACATCGACATCTTAGTGAAACCTCACATCGAACCTCAAACATTTGTAAAACCTGTATGCTTTGCTCCATTGATGCCAGTTAGTGCAGATTCAGATGacgaaaatatgtttttaatcaAGAAATCAAAGGAATCTAATAATCTaaacaatattatgttttattctttAGGAGTCAACTTAGATTCAAATGCCAACACAGATATTCCAATTATTGACGCCGACAGTAATGTCTTGAATTTAAATGATAGCACATTAGCAACAACTCCCATTCCTAGTTCCGCTGACACTAATACTAAAAcccaagaaaagaaaagaaaaattgtacccCTAAATGATTTTATGCATTATCCtgaaataacgaaaaaaaagacCAAAACTGTAATGAAAAAGGAACCTGTGCCATTTGGATTAACAGGTCGCAAATGTAAAGAATATTTCGAAAAACAAGACGAAGAAAAACGAAGAAAAGAAGTAGAAATAGAAAGAAAACGGAAGAAGAGAAGCGAAGAAATACAAACACGTAAAAGTAAAGCCATTGAAAAGAAAAAGACGCAACAAAAGAAGAAACAGCtaaatgatgataataaaataactgaaaacCACACCGAAAAAGTGAAGATTCAAGACCCGAAATCTGGGAAAGTTAAAGAAATACAgcctaaaaacaaacaaaataacgaaATTAATCTTACGAATCAAAAAGCCTCTGAATTACACAAACCAgctgatatttataatataaacacaGGAACAAAGGAAAATGAAGAAATATGTTTGGTACATGataattatgtggaattatGTGGAAAGTACGTTATTGTTGggtttaaaacagaaaaaaggGTTAGATATTTTGTTGGCAAAGTTCTTATGTATAatgatgaacaaaaaaaatacaaagtagaTTTTTTGAGGAAACGATCAGTGGCAGAAAACATTGTCACATTTGTGAAGCCTCAAATTTCTGACGTTTCTGAAATTAACTTTTCTGATGTTGACCGTGTTTTAACTGACCCATCTATATCCAGACGAGGTTTCGTCTCTTTTTCTGACGTTAGTTTTAAGGACATTGAATAG
- Protein Sequence
- MESKKKYERFRYTPEALEKALQSIINGETTLNKASKYYNIPKSTLHNKLTNKVPRERKMGPATELTSNEEAELAEWILNKAKLGFPMHPDDVVDTVESFLNANNRVSKFTENRPGDKWLQLFLKRHPDVTKRNSELISKARAAVTEEGIRKWFLELEEYLIEENAIDIINDPSRIFNSDETGVLLCPKTGLILGPKNYKNTYQISHGKEKESVTVLCTFSADGNNVPPFVVYPYKRMPPAVAKEFPDTWFIGRSDSGWMVSATFFAYIKLYHEWLLENKIKFPVILFLDGHKSHINREMTTFCKEKRILLFCLHPNATHILQPCDVGIFGPIKKFWKKVVRKHKQATTAPVTKQNFAPIFKKAYDNAVKPETIKNSFRACGLFPVNADAVDYSKCINTRRQEIAEKTRQNNMLTDFDEQKDDMRSTMKVIENEIDQITRLEFLKYYQIKKSYVHPLFDLWAKCKATLENDPNRYQNRVEKENVLPEVPLDLSNSSTVEVTSQRASTATLVVNDSNSGDENPNIETIETVVQIHEHANSNAIEKDNEDLTATCTPILNDTDLFGEKTTYDFDKTDDIIDYIVDHDTSLPLLVTIPPHHKTMEIDAVTDGAYCNTQKGDNTAESNFSPSKPPTVSQTSAKSVSNMDMSNSSVTVIPDVLEIGSINTDSQNSKISLDLDAITMTRNRNSENDIDILVKPHIEPQTFVKPVCFAPLMPVSADSDDENMFLIKKSKESNNLNNIMFYSLGVNLDSNANTDIPIIDADSNVLNLNDSTLATTPIPSSADTNTKTQEKKRKIVPLNDFMHYPEITKKKTKTVMKKEPVPFGLTGRKCKEYFEKQDEEKRRKEVEIERKRKKRSEEIQTRKSKAIEKKKTQQKKKQLNDDNKITENHTEKVKIQDPKSGKVKEIQPKNKQNNEINLTNQKASELHKPADIYNINTGTKENEEICLVHDNYVELCGKYVIVGFKTEKRVRYFVGKVLMYNDEQKKYKVDFLRKRSVAENIVTFVKPQISDVSEINFSDVDRVLTDPSISRRGFVSFSDVSFKDIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -