Ckad005808.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Caradrina kadenii
Gene Symbol
osa
Assembly
GCA_947462355.1
Location
OX381692.1:4389932-4410561[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-08 2.5e-05 24.6 0.0 49 89 110 147 107 147 0.90

Sequence Information

Coding Sequence
ATGTCATGCCACTTTTGGACAACCACGTTAAACCTTGCACTGAGCTGCACGTGCAACTGTGGCGCTATTGTCGGATGGGAAAGTAAAGACCTCGGCTTGGTGCGTTACGCACGCGGCCGCGCGGTGACGGGCGCTGCCCTTGACAGAGCTGCATCAGGTGAAGAAGCTTGCGGCGGCGGGTCGGGCTCTAGTAAGGGCGGGTCGCGCAAGGAGTACGGCGCCGGCAGTGCGGCGCCGTCGCCGTCGCCCGGCGGCGGCTCGCACTCGTCGCTGCATGACGACTACGACGCGTCGCCCTCGTCGTGGCCACGCCCGCCCTCTAGTCCCgtgacgaagaataagacgtggaaggacatcgcggggttgctgggcatcggcgcgtcgtcgtccgcggcgtacacgcttcggaaacattacacgaagaacttactagcgtatgaatgccatttcgaccgtggcggcattgacccacagcctattatcaaccaagttgaagcctccaccaagaaaaagagtggcaagTCCAATAGCACGTCTAGTACAGGTTACCAACAAGGTTACGGGTATGAATACGGATCTCCTTACCAGCCGAATAGGCCTGTTTATCCTCCTTATGGTCCCGATGGCGACAGAGGGTACCGAGGTGGCGCCGTGGGGTCGGTGGGCGCGGTGGGCGGGCCGGGCGCGGGCGCCGACTACCAGCAGTACGGCGCTTACGCCGGCGCCTACCGCGGCGCCGCGCCCGGGGCCGCCACCCCGCCGCCCGCGCAGCCCTACCCCGAATACTACCGCGCGCCGCACCCGCAGCATCCGCAGCACCCTCATCCGCCGCACCCGCAGCACCCACAGCATCCGCAACACCCGCAGCATCCCCCGCATCCGCCCATCTCGCCGCAGCAGCCGCCGCACGAGGTAAACAAGCTTACTAAAACAAACCATGAATTTAAAAATTTTCAGGGCACGGCACCAGTTCTGACTGCCCCCGGACAATTAAAACGGGAGCTAACATTCCCTGCCGAGTGCGTGGAGGCAGCCGTCCCGACGGGCGAGAAGCGGAGAAGACTTACTAAAGCAGACGTTGCGCCTGTCGACGCGTGGCGCATCATGATGGCCCTCAAGTCCGGCCTGCTCGCCGAAACGTGCTGGGCACTCGACATTCTCAACATCCTCCTCTTCGATGACAACTGCATAGGATACTTTGGCCTACAGCATATGCCCGGCCTGCTCGATTTATTACTTGAACACTTCCACAAAAGTCTAAGCGACGTTTTCGACTCGCCGTCGAATGAAGACGGACCCTGGTACGCACCTCCCGCCAGTCCCGAGCCAGTAATCAAAAGCGCGAAAACCACGAGAGAACCGCGGGAACCGCCCGACCCGACCGACAGAGTGCGCTTCCTCAGCGGAGAGAACTACACGATGGAGTCGCGGCGGAGGCATCCTGTGGTGTACAAGCAGGACGACGAGCTGTTCGCGCCCGACGACGACGACGCGCACGAGCTAGTGCACCACGATGTGCTGGAGCCCTGGCACACCGGCGGCGACACGGCCGGCGCCGCGCACGTGCTGCCCGTGTTCCGCGCAGAGTTCCTGCACCTGCCCTTCGTGCGCGTCATGCCGGGACAGCGCGCGCCCGAACCCTCGCCCGCCGCCTCGCCGCGCGTCGCGCCCGACCCCGTGCCCGGCTCGCCCGCGCCCGACGCGCCGGGCGAGCCCTCGGGCGACAACCTGGCGCCCGAGCCCATGGAGCTGGAGCCGGCGGGCCGCGCGCTGGGCGTGCGCGACCCGGCCGGCGTGCTTCGGCGTCGCCGCCTGGCAGACTACGAGGACGAGTGCTACACGCGCGACGAGCCCAGCCTCAACCTCGTGGACGACACGCGCGACGCGCTGGCGCGGCGCTGCATCGCGCTCTCCAACATCCTGCGCGGGCTCACCTTTGTGCCCGGCAACGAACCCGAGTTCAGTCGCTCCGGCGCCTTCCTCGCGCTGGCGGGCAAGCTGCTGCTGCTGCACCACGAGCACGCGCCGCGCGCCGCGCGCGCGCGCGCCTACGAGCGAGCCGCGCGCGACGAGCACGACCAGGCCGCCTGCTGCTCCTCACTGCGCGGCGGCGCCGAGTGGTGGTGGGACGCGCTGGCGCAGCTGCGCGAGGACGCGCTCGTGTGCTGCGCCAACATCGCGGGCGGCGTGGAGCTGGCGGGCCAGCCCGAGGCCGTGGCGCGGCCGCTGTTGGACGGGCTGCTGCACTGGTCCGTGTGCCCGGCGGCCGTGGCAGGCGACGCGCCGCCCGCTGCCGGGGCCGCGTCGCCGCTATCGCCGCGCCGCCTGGCGCTAGAAGCGCTGTGCAAGCTGTGCGTGACGGACGCCAACGTGGACCTGGTGCTGGCCACGCCGCCGCGCGGCCGCATCGCGGCGCTGTGCGCGGGTCTGGCGCGCGACCTGTGCCGGCCCGAGCGGCCCGTGGTGCGCGAGTTCGCCGTGAACCTGCTGCACTACCTGGCGGGCGCGGGCGGCGCGGCGGCGCGTGAGGTGGCGCTGCACGCGCCGGCGGTGGCGCAGCTGGTGGCGTTCATCGAGCGCGCGGAGCAGACGGCGCTGGGCGTGGCCAACCAGCACGGCGTGGCGGCGCTGCGCGACAACCCGGACGCCATGGGCACGTCGCTGGACATGCTGCGCCGCGCCGCCGCCACGCTGCTGCGGCTGGCGGAGCACCCGGAGAACCGGCCGCTCATCCGGCGTCACGAGCGGCGCCTGCTGTCGCTGGTGATGAGCCAGATCCTGGACCAGAAGGTGGCGCACGAGCTGGCGGACGTGCTGTTCCACTGCAGCCAGGCGCGCGCGGACGCGGACGCGGAGTAG
Protein Sequence
MSCHFWTTTLNLALSCTCNCGAIVGWESKDLGLVRYARGRAVTGAALDRAASGEEACGGGSGSSKGGSRKEYGAGSAAPSPSPGGGSHSSLHDDYDASPSSWPRPPSSPVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSTGYQQGYGYEYGSPYQPNRPVYPPYGPDGDRGYRGGAVGSVGAVGGPGAGADYQQYGAYAGAYRGAAPGAATPPPAQPYPEYYRAPHPQHPQHPHPPHPQHPQHPQHPQHPPHPPISPQQPPHEVNKLTKTNHEFKNFQGTAPVLTAPGQLKRELTFPAECVEAAVPTGEKRRRLTKADVAPVDAWRIMMALKSGLLAETCWALDILNILLFDDNCIGYFGLQHMPGLLDLLLEHFHKSLSDVFDSPSNEDGPWYAPPASPEPVIKSAKTTREPREPPDPTDRVRFLSGENYTMESRRRHPVVYKQDDELFAPDDDDAHELVHHDVLEPWHTGGDTAGAAHVLPVFRAEFLHLPFVRVMPGQRAPEPSPAASPRVAPDPVPGSPAPDAPGEPSGDNLAPEPMELEPAGRALGVRDPAGVLRRRRLADYEDECYTRDEPSLNLVDDTRDALARRCIALSNILRGLTFVPGNEPEFSRSGAFLALAGKLLLLHHEHAPRAARARAYERAARDEHDQAACCSSLRGGAEWWWDALAQLREDALVCCANIAGGVELAGQPEAVARPLLDGLLHWSVCPAAVAGDAPPAAGAASPLSPRRLALEALCKLCVTDANVDLVLATPPRGRIAALCAGLARDLCRPERPVVREFAVNLLHYLAGAGGAAAREVALHAPAVAQLVAFIERAEQTALGVANQHGVAALRDNPDAMGTSLDMLRRAAATLLRLAEHPENRPLIRRHERRLLSLVMSQILDQKVAHELADVLFHCSQARADADAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-