Ckad008903.1
Basic Information
- Insect
- Caradrina kadenii
- Gene Symbol
- Jarid2
- Assembly
- GCA_947462355.1
- Location
- OX381672.1:1898809-1907281[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2 3.4e+03 -1.5 0.0 13 41 564 593 556 596 0.75 2 3 7.7 1.3e+04 -3.3 0.0 27 41 823 837 806 854 0.72 3 3 1.6e-19 2.7e-16 59.8 0.0 8 89 973 1051 967 1051 0.90
Sequence Information
- Coding Sequence
- ATGATCTCACAACCTGTAGTGCTCCTTGAGAGGCTGCGTGGCGAACCCACGCCTCGCGACGACCCACAGCCATCGCAAAGCCCGAGCCCTGAGCCAGAACCCTTGGAAAATCATCGTGACAATATCAATGAGCATCGGGCTAGATCCAGGAGCCCTGCTGAACGTCCCAGATTGCGAAGGCTTAGAAAGAAAAAGGAACTTCAACGTATACACCCCATGTCATTGCGGTCGCGACGCCTGAGCAAGCTAGAATTAAACAGAATCATTGCGGAAAGTTGTACGCCTGTCAGAAAACCAACCTCGAGGCGAAGCAAGAAGACTTCGTCCGACGATGATGAACCCTTAATATTGCAAGTCTCTCCAAGAAACGCTTGTAGAAGCAGCAGTTCAAACACACAAAACGGCACTGCCGACAAGAGCATACCTAACGATAGAACACTTAGGTTGGATGTTTCCAAGAAGAGAACCCACAAGTCGAGTTCTTCCATGGAGAGAACACCAAAGAAGAAAACACCTAAGAAGAAAAGATCACCGAAACAGACAACGTCCAAGAAGAGCACAAAACAACCCGCAAAAGTTTTGCCAGAATTTACTTTTGCGGTTGTGAGAGAAGACCCAGTTATCCTGGAAGAACCGATCATCAAGGAAAATCCAGATGATTCAGTCCGTTCGGAAAGCCCGACTGATCCAATAATCCTAAACTTCGCGGATATCATAGGCTATAAAGAAAGCTCGGTTAATCCTATTATACACTTCATGGATGACCCAGTTGATCCGGCCACTTCAGATGGTCCTGCGGCCCCGACTGTCCCAGATACCAAGGATAACCCAGTTATCCCGCCCATTGCGCACAGCAAAGTGATGTCTCCAAATTACTCACAGGGAGTTACAAATTCATCGAAAACCCGACGACAATTGGTTCTGACACCTGAGGAATTGATTCTGGAGAATAAATCAGAAAACCTGGATGATCTTTCGGAACAACCTGATTTCCAGGAACAACCTGATTTCCAGGAACAACCTGATTTCCAGGAACAACCTCGTATCCCGGAACAACGTCATATCCCGGAACAACGTCGTATCCCGGAACAACGTCAAATCCCGGAACAACGTCATTTCCCTGAACAACCTGATTTCAGCAATATTGAATTTCTCGATGATGGCATTCCGATTGAAGAAGGCACGCAGTATGGCGTACCCGATAATGATAATGATGATGAAGATTCGGACAATACACCGCCACACGAAATAGTAAGGATGGATGCAGGCTCGGAAGTACAAACTCCAGAACCCATGCCCGGACCGAGCGGCATGCAATATCAATTTGAGGTTTACGATCCCGTGTTTGGAAGATATAAAGAGTTCCCGAGTGTTACTGGAATACGGGGCTTCGCTCATAGTAACTCAACATACCAGCATATTTTGAAAAATACTGCTCTTAACCTAGAGGCAGAAAGAGAAAAATTGAATAATAGAACTCGGAATCACAATCACGAAGTTCAGTCAGAAATATATATCACGGAAGAGGATCAGGATTGCATCACACATAAATGGCCTAATTTCCAAGATGTCATAAAGGCACCTGAAAAAGTACTGGCAGCTCGCTGCAGAGAATGTTCGCGCTGCATTAGAATCGCTAAACTTATAAAGATTTCAGCTTTACTTAAAACGACCCAATTAAATTCAAAGAGCAAGAGCAACAATGTGGCGGCGTTGTTAACCTGTCCATTGATCGATAACAGTGAGGTTGATAACGCCAAAGTTAATAACGCAGTGCGTGCTGCTTCGCCGCCCAAAACACAAAGGCATCAATATTTCGATTTAATACCAAAACATCCGACAATGATGATTAAATTGGGATCCCACATGGTACACGGCAAAGACCTTCTTTCCGTGTCTTTGGCACCTAGAACTGAAGATCGGGGGGAAAATAGAGATTCCTCTCAACAAGATTCAGAACGGCTCCTTGACCGACTGTTTGACACCATGTCGCTCAGTCTTAACGATAATGCAGAGGATGATAGAATTAGCTTGTCCTCGAGTTCAAATAGCTTTGCCCCCGTCCCAGAGGAGTTAGAAGAGCTAGAGGAGCCTGATGAACGAGAAGAGTCACAAGAGCCAGAGAGAGCAGTGGCGCCACAGGAGCTACAGGCGCCACAACAGCCACGGGCGTTACAGGGGGTACGGGTGCCGCAGAAGTCACAGGCGACACAGGTATCACAAGAGCCACGACAGCTAGAGGAGGACCTATCTGAAAGAGTCGAACAGTTAAGAAAAAAAGAGGAAGAGGCAATAAAACGTTTAGCCCAAGTGGAGAAGATACAAGAAAGTGTGAAATCCAAAAGCGAAAGTGCGATTGCCGAATTTGAGGCACAAAATAGGTTCGGCTTATCTCAGATATTGGAGGTCAAGAATAATTGCCAGACGGAGCTATGGCGCTTCCAGGAGCAGGTTCTCCAGCTACATAAGCGGAACGAGGTCGATTTGGCTCGCCTCCGCTCGGAGATCAAAGCAAATCTGCAAGCAGAAATGGAGGCTGATCGCCGTATGGTCAAAGAAGTCGACAATATGGCGAAGGCATTAGAAAAAGAAAAGGACGCGAAGGCAATGAGTTCGGCAGAGAGTGTGCCAGATTTGGATGCCCCTGGCACCAGCGGCTGCGTTATTCCGTCGGTAGGCGGGACGCTAGTGGATGCGCCCATATACTTCCCAAGTGATGAAGAATTTAAAGATCCCATCGCCTACTATGAAAAGATCTGGCCGATCGCGAATAGGTACGGCATCTGTAAGGTGGTGCCTCCTCCCAGTTGGGACCCGCCACCCTGTGCCGTGAAGGATGACATGAGATTCGTCGTAACCAATCAATACATTTCGCGACTGTTCAGCCGCTGGGGCCCGGCCGCGAGGGAACTTAGTGCCATCAAGTTGTGTCTCCGGCAACAAAATGTTAATTTCTCACGACCACCATTGCTAGAAGGAGTGGAAGTGAATTTACCCAAGTTGTACCACCTCGTGCAGCGACATGGTGGTCTTGAAAACGTAATCAACAAGAATCGATGGGGCAGAGTTGCAGAAGATATGAAATTCACTAAGTTGCCACATACTGAGAAAAGGCTGGACCAGATATATGTAAAGTTTTTGCTGCCATATGACACACTTTCTCACCAGGAACGCCAGGAGATTATGCGGAAAGTGGAAATTGCATGGAATAGAAAAAATCAAAAGCTTTTGGACCGTGCCATGAATCCGTTGTACCGCCAGAAACGAATGCTTGGCTTAATGGAGTCTTCTGACGATGAGACAGAAGATGAAGACACTGCTATTGCTGTCAATGATACAGAAGATTGTGTTATCAAGGGCGGTAGCATGACTCTAGCTAGATTCCAAAAGGTTGCCGCCATGGCGTTCGAAAATACATTCGGACCGCGCTCCGAGGCCCCTCCCAACGTAATGGTTATCGAGGAGCATTACTGGCGCACCGTGACCCTGGGCACCGAGCATATGTGTGCGTACGCCGCGGTCATTGACACCGGCGACGAGGGTTACGGGTTTCCCAAAAATCGAAATGAACCGTATGGGGACCACCCGTTTAACCCCAAGATGATTAGCAACCATCCCCGCAACGTGCTCCGCTATTTAGGTTCGGTGTTGGGCCTAACGGTGCCCACTCTTCTTCTGGGGATGTTGTTTTCCACGTCCTGTTGGCACAAGGATCCCCATACATTACCCTGGTTGGAGTACCAGCACCAAGGACCCACTAGGATCTGGTACGGAATAGCAAGGGACCAGGCTGACAACTTCAGGAAGGCTGTCGAGACACTATGCCCGACATCTTGCCAAAACAAAGGCCTGTGGCTGCCAACCGACATCTCGATGATACCGCCGCAGGTGCTGCGCGAGCACAACGTGAGCTTGGCGCGCCTCACGCAGGAGATACGCGAGTTCATCGTGGCTTTCCCTAACGCCTACACGTGCTGCATCACGACCGGGTACACTGAATCAGAGAGCGTGTACTTCGCACCGCCATGCTGGCTCGAATCCTTGTGGTCGGTTTTCAAGGAGACTCGTGACAGTTGCGAGCCGACCATGTTCGCGATGGAACATCTGCTCTACAATATTGGCAAAGACAAGGAAGCTGATATAGAGATCTTGAAAATTACCCAGCCGCTGTTTGACAAAATGCTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAAGAGAGAGGACTTTCCTTTGTAAAGGATTCGCAGACACTCGGCAAATCATCAAAGAAGAAGAAAGCGAACCCATTCAATTCGCAAGATGTAGATGAATGCGATTATTGTCGGGCCATTTTGTTCCTCTCGAAGGTAAAAGGGATCACCGGCAGGGACTCGCTTTTCTGTCTTGAACATGCACTCAAATTACTAGAGACTGAAAAATATAGGGATGCAGAAGTAGCACCCCTAACAGTTCTTGTGCACGTGAGTGTAAGCGAGTTGAACTCCATCAACGCCGACATGAAGCATCGCCTCGGCATCCGGTCCGTTTGA
- Protein Sequence
- MISQPVVLLERLRGEPTPRDDPQPSQSPSPEPEPLENHRDNINEHRARSRSPAERPRLRRLRKKKELQRIHPMSLRSRRLSKLELNRIIAESCTPVRKPTSRRSKKTSSDDDEPLILQVSPRNACRSSSSNTQNGTADKSIPNDRTLRLDVSKKRTHKSSSSMERTPKKKTPKKKRSPKQTTSKKSTKQPAKVLPEFTFAVVREDPVILEEPIIKENPDDSVRSESPTDPIILNFADIIGYKESSVNPIIHFMDDPVDPATSDGPAAPTVPDTKDNPVIPPIAHSKVMSPNYSQGVTNSSKTRRQLVLTPEELILENKSENLDDLSEQPDFQEQPDFQEQPDFQEQPRIPEQRHIPEQRRIPEQRQIPEQRHFPEQPDFSNIEFLDDGIPIEEGTQYGVPDNDNDDEDSDNTPPHEIVRMDAGSEVQTPEPMPGPSGMQYQFEVYDPVFGRYKEFPSVTGIRGFAHSNSTYQHILKNTALNLEAEREKLNNRTRNHNHEVQSEIYITEEDQDCITHKWPNFQDVIKAPEKVLAARCRECSRCIRIAKLIKISALLKTTQLNSKSKSNNVAALLTCPLIDNSEVDNAKVNNAVRAASPPKTQRHQYFDLIPKHPTMMIKLGSHMVHGKDLLSVSLAPRTEDRGENRDSSQQDSERLLDRLFDTMSLSLNDNAEDDRISLSSSSNSFAPVPEELEELEEPDEREESQEPERAVAPQELQAPQQPRALQGVRVPQKSQATQVSQEPRQLEEDLSERVEQLRKKEEEAIKRLAQVEKIQESVKSKSESAIAEFEAQNRFGLSQILEVKNNCQTELWRFQEQVLQLHKRNEVDLARLRSEIKANLQAEMEADRRMVKEVDNMAKALEKEKDAKAMSSAESVPDLDAPGTSGCVIPSVGGTLVDAPIYFPSDEEFKDPIAYYEKIWPIANRYGICKVVPPPSWDPPPCAVKDDMRFVVTNQYISRLFSRWGPAARELSAIKLCLRQQNVNFSRPPLLEGVEVNLPKLYHLVQRHGGLENVINKNRWGRVAEDMKFTKLPHTEKRLDQIYVKFLLPYDTLSHQERQEIMRKVEIAWNRKNQKLLDRAMNPLYRQKRMLGLMESSDDETEDEDTAIAVNDTEDCVIKGGSMTLARFQKVAAMAFENTFGPRSEAPPNVMVIEEHYWRTVTLGTEHMCAYAAVIDTGDEGYGFPKNRNEPYGDHPFNPKMISNHPRNVLRYLGSVLGLTVPTLLLGMLFSTSCWHKDPHTLPWLEYQHQGPTRIWYGIARDQADNFRKAVETLCPTSCQNKGLWLPTDISMIPPQVLREHNVSLARLTQEIREFIVAFPNAYTCCITTGYTESESVYFAPPCWLESLWSVFKETRDSCEPTMFAMEHLLYNIGKDKEADIEILKITQPLFDKMLREEVTNRQMLQERGLSFVKDSQTLGKSSKKKKANPFNSQDVDECDYCRAILFLSKVKGITGRDSLFCLEHALKLLETEKYRDAEVAPLTVLVHVSVSELNSINADMKHRLGIRSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -