Ccla007653.1
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- Zmiz1
- Assembly
- GCA_932526535.1
- Location
- OW052096.1:5859786-5871267[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.081 8.5e+02 0.1 0.9 4 24 481 501 478 506 0.88 2 2 7.5e-26 7.8e-22 77.0 4.6 1 50 565 614 565 614 0.98
Sequence Information
- Coding Sequence
- ATGAATGGAGCAGAGGGCGGCGCCGGCGCGGGCGCATCGGAACGCGGACGAGACGCGTCGCGCGCGCTGTTCTACGTTCGCTTTCCCGACTTTCCAGTCGACACAGGCGATGGGGTGCCTTGGAACGGCAGGACGGCGCACTCCAATAGTACGGCCGGGTACGCGGGCTCTATCATCACCTACGGGGGAGCACAAGCTCCCGATAGTGGAAAACACAACCCATTGCAAGGGACCATTGGATACAGAGTCAACGCCCCTAGCGGCTATGGGTGCGCCGGCGGTTCGGGCGCGATGAGCGGCGGGGGCGAGAACGCGCAGTTCGGCGCCACCGCCGCAATGGTCGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCTTTCTCGCAGATGCAAAACAACATGACTATGGGAAATCCCCAATATGGTGCGATGAACGGCTACGGTCAACAACGCAGTCATAATCCGGCTATGACCGGAATGGGGATGGGAGGTAACGGTGGGATGAACGGAATGACCAGCATGGGGCAGATGGGAAATGCCGGTATGAATGGTATGAACCCCATGGCGCAGATGGCCAACATGGGTATGCATGCCAACATGATGCCATCCCAAATGGGGCCTGGACAAATGAGTAGCTCAGCAAAGATGGGACCAGGATACCAAAGGCGACATACGCCGTATCCGTCCGGCACCATGCTTATGGGTCAGCGAAAGACGCAATACATGAGTGGACAACCTGGTTTTGGCCCGACTCAGTATCCAGCGGGGTACGGCGGCAGACCGGGCTTTCAGGGGCAATACCCACCGCAACAACCATTAGGGCCAAGCGGTAACTTCGGTGCGGCGATGAGAGGAACAATGAGGCAATCAACACCACCGTACTCAAATCAGGGACAGTACTTCAATGGTGGCGTACCAAGCCAATTTCCTCAGCACCAGAGTAGCAACGCGCAGTACGGTGGACAATACGGTGGACAGTTTGCGCAAGAGGTTGCTATGCGCACTAACATGAGCTATCAGCACAGTCCAGTTCCTGGTAATCCGACGCCACCGCTTACGCCCGCCAGTAGTATGCCACCGTACATTAGTCCTAATGGTGACGTGAAACCCCACTTCAACGAGCTCAAACCACCAATGGGCATGCAAAATGACGAGCTCCGGTTAACATTCCCCGTAAGAGATGGTATTATATTACCACCATTTAGATTAGAACATAATTTAGCAGTTAGCAATCATGTATTTCAATTAAAACCCACGGTCCATTCGACGTTAATATGGAGATCAGACCTTGAGTTACAATTAAAATGCTTCCACCACGAAGATAGGCAGATGAACACAAACTGGCCAGCGAGTGTTCAAGTGTCGGTCAACGCGACTCCATTAGTAATAGATAGAGGAGAGAACAAAACATCACACAAACCATTGTACCTGAAAGAAGTGTGCCAGCCAGGCCGAAATACGATACAAATCACTGTCTCAGCCTGCTGCTGTTCACACCTGTTTGTTTTACAATTAGTTCACCGACCGAGCGTGCGAAGTGTGCTGCAAGGTCTATTAAGAAAGCGCCTATTAACAGCAGATCACTGTATCGCGAAGATCAAGATGAACTTTAATCAGACGCCGACGAATGGTAGCAATGGATCCAATACAGCTAACGACAGGGACAGCGTTGAACAAACAGCTTTAAAAGTATCATTAAAATGTCCAATCACATTTAAGAAAATCACACTGCCAGCACGTGGGCACGAATGCAAACACATACAATGCTTCGATCTAGAATCGTATTTACAACTGAACTGCGAACGGGGGTCATGGAGGTGTCCGGTTTGCAATAAACCAGCACAATTAGAAGGCTTGGAAGTCGACCAATACATGTGGGGTATCCTTAACACGTTGAACAGTTCAGACGTAGACGAAGTTACGATTGACAGCGGTGCTAACTGGAAGGCAACTAAAATCACCAACAATACTGGCATAAAGCAAGAAGAAGATAGCAGTGATGGCAGCGTAGGAAAGCGTAGTAAAGCAGTATCACCGGGATCTATGAACATGCCCACAATGAACAACTGGGACATGAATCAAGCGCTATCACCATACCTTCCACCTGACATGAACACTATTGCAAGCGGCTCAATGATCTCTTCGTACAACCAAAACGGCCAGAATAGAAATTCAAGTTCGAACAACCAGAACTATGACTTCGGAATGACTAATGGGCCTGGCAGTAACGAGTACGCTGGCAACGGACCTCTTTCACATCTGAACGAGAGCGTCAACTCATTAGATCCTTTAAACGCAATGGAGAAGAGCCTTAACGATCAGATGCCGCATACACCGCACACGCCACACACGCCCGGGTCGGCGCACACGCCGGGCGGCGGTGGTGCGCACACGCCGGGCTCATCGCATACGCCGGGCCCACCGTCTGTGGACCACCACTCGCTCACCGATGTCGACATACCCGCCGACCTCAACTTTGATCCCGCTGCCGTCATAGATGGAGAAGGGACAGATAATCTCAATTTATTGCCGGAGACAAGTGTGGATCCGATGGAACTGCTGTCATACTTAGACGCACCTGCGCTTGGTGAACTATTAGCGACACCGCCCTCATCGTCATCGTCGGCGGGCAGTCATCCACCGCGTGCGCCTTCCTCCGACGACCTCCTGGCGCTGTTCGAGTGA
- Protein Sequence
- MNGAEGGAGAGASERGRDASRALFYVRFPDFPVDTGDGVPWNGRTAHSNSTAGYAGSIITYGGAQAPDSGKHNPLQGTIGYRVNAPSGYGCAGGSGAMSGGGENAQFGATAAMVAAATTAAMQDSQPFSQMQNNMTMGNPQYGAMNGYGQQRSHNPAMTGMGMGGNGGMNGMTSMGQMGNAGMNGMNPMAQMANMGMHANMMPSQMGPGQMSSSAKMGPGYQRRHTPYPSGTMLMGQRKTQYMSGQPGFGPTQYPAGYGGRPGFQGQYPPQQPLGPSGNFGAAMRGTMRQSTPPYSNQGQYFNGGVPSQFPQHQSSNAQYGGQYGGQFAQEVAMRTNMSYQHSPVPGNPTPPLTPASSMPPYISPNGDVKPHFNELKPPMGMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQTPTNGSNGSNTANDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSDVDEVTIDSGANWKATKITNNTGIKQEEDSSDGSVGKRSKAVSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQNGQNRNSSSNNQNYDFGMTNGPGSNEYAGNGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPGSAHTPGGGGAHTPGSSHTPGPPSVDHHSLTDVDIPADLNFDPAAVIDGEGTDNLNLLPETSVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357101;
- 90% Identity
- iTF_00050494;
- 80% Identity
- -