Ccla001993.2
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- GATA-B
- Assembly
- GCA_932526535.1
- Location
- OW052089.1:117696-122819[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-18 9.8e-15 54.1 3.9 1 34 11 43 11 45 0.97 2 2 9.3e-18 2.2e-14 53.0 7.2 1 34 78 110 78 112 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCCGCGCCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCGGGCATGTCGTGCACCAACTGCCAGACCACCACGACGTCGCTGTGGCGGCGCAACTCGCTGGGCGAGACCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGACCGCTCGCCATGAAGAAGGACTCCATACAGACGAGAAAGAGGAAACCTAAGAATAGTATAAAAGCGGAGCGAAGTATCAAGGCAGCCGTCCAGCGCACCGTGACGTCGGGCGTCAAGATCGAGAGCCTGCTGGAGGGCGGCGCGGGCGCGACGGGCGGCGCGCGCTCGCCGCTGGCGCTCAACTACTACGTGCAGCACGCGCTCAAGGTGGAGGAGCCGCCCCCGGCGCACGCGGCGCACGCGCAGCCCGCCGCGCACCTCGCGCACGCGCAGCACGCGCACGCCACGCACGCGCAGCACGCGCACGCCACGCACGCGCAGCACGCGCACGCGCAGCACGCGCTCTACGACGACGAGTACCGGCGCGCCGCCGACGAGCGGCTCGAGCGCCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPHAPPHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKAAVQRTVTSGVKIESLLEGGAGATGGARSPLALNYYVQHALKVEEPPPAHAAHAQPAAHLAHAQHAHATHAQHAHATHAQHAHAQHALYDDEYRRAADERLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00071972;
- 90% Identity
- iTF_01193283;
- 80% Identity
- -