Basic Information

Insect: Caradrina clavipalpis
Gene Symbol: zfh1
Assembly: GCA_932526535.1
Location: OW052096.1:201193-210566[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.018 1.2 10.0 0.3 1 23 74 96 74 96 0.94

2 8 5.5e-06 0.00035 21.1 2.8 1 23 107 129 107 129 0.98

3 8 1.7e-06 0.00011 22.7 6.2 1 23 138 160 138 160 0.99

4 8 0.00012 0.0076 16.9 1.0 1 21 166 186 166 187 0.95

5 8 0.00025 0.016 15.9 1.0 1 20 443 462 443 464 0.93

6 8 8.9e-06 0.00057 20.4 1.1 1 23 765 787 765 787 0.94

7 8 7.4e-05 0.0047 17.5 7.6 1 23 793 815 793 815 0.98

8 8 0.048 3 8.7 8.1 1 21 821 841 821 842 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.018	1.2	10.0	0.3	1	23	74	96	74	96	0.94
2	8	5.5e-06	0.00035	21.1	2.8	1	23	107	129	107	129	0.98
3	8	1.7e-06	0.00011	22.7	6.2	1	23	138	160	138	160	0.99
4	8	0.00012	0.0076	16.9	1.0	1	21	166	186	166	187	0.95
5	8	0.00025	0.016	15.9	1.0	1	20	443	462	443	464	0.93
6	8	8.9e-06	0.00057	20.4	1.1	1	23	765	787	765	787	0.94
7	8	7.4e-05	0.0047	17.5	7.6	1	23	793	815	793	815	0.98
8	8	0.048	3	8.7	8.1	1	21	821	841	821	842	0.96

Sequence Information

Coding Sequence: ATGAAAGTGCAGAGCTCGTTAATGGGAGTTGGCGGTTGGTACGAATGCTTGGCGGCCGGTTGGCTTGCGGACATGAGGAGTAAGCAAGTCCCCACGTCTACCACCTCGGCCAGGCGGCTCGCGGCCTTAATCCGTCCGTTGGCCGGCGGCGGGTCAGAGGGCAAGCCGTCGGAGGAAGAGGAGGAGCGTGGCGGCTCTCCACTCGGCCCCGGCGGCCCGTTCTCCTGCAGCCAGTGCCGCGGAGCCTACCCCACGCGCGAGCAGCTCGAGCGCCACGAGACCCTGCACGCGCCCAACACACAGGTGGATACAGTCAAATATTCGTGCAAGATCTGCCACAAAAGCTTCGCCAACGTATACAGACTGCAGCGGCACATGATCAGTCATGACGAAAGCGCTCTGCTCCGCAAGTTTAAATGCAATGATTGCGACAAAGCTTTTAAATTCAAGCATCACCTAAAAGAACACTTACGGATACATAGCGGAGAAAAGCCCTTCGAGTGCGCGAACTGCGGCAAGAAGTTTTCTCATTCAGGCTCCTACTCCAGTCACATGACGTCCAAAAAGTGTCTCGTTATGAATCTTAAAATGGGCCGAATTAAGCCCAATAATCCTGCGCTTAACCCAGAAAGAAGTCCATCTCGAAAAAGGACTAATGCCATGATGGCCTCCCAGTTAAATAATAATATATCTCCAAACGGGAATTCCTTCCTACCCATGCCTGCTGCCTTCTTTGCATCCATGTCGGCGCAAGAAAATAATTACCACCGTCCGCCCTTAGGACAACCTGGAATTTCCTTCTACATGCCTCCGGGCATGCCCATGAGTCCTGCGGGTGGGATAGCTCCTTACAGCATACCAGCCTCCATCAGCCAATTTTTAGAGCAGCTAGCTTCATCGCAGTACCAACAAAGAAAAATAGAAAATCCTGCTAGTCCCAAGGTCACAAGCCCTCTATCAGCAGATCCTGAAGACCTGATCGAGGAAGTTACCGAAGATGATGATAAGCGATCAGAAGGAAGCGCTGAGCTTGTCATGGACATTGAGGATGAGGAAGCTGTGTCTATAAAAAAGGAGCAAGAGGAACGAGACAGCGACCTGAGGTCTCCGTCTCGCAACTTTGAATCCGTCCCTTTAAATAACAATGTTCACGACGCCGAAAATCCAGGTTTCAATTCCATACTAGAATCTGTGAGCGCATCCGTGACGAAACATTTCTTTAGAGCAAACATGGAAAAGCTCTCTCCTGTATCAGGCAACAATTGCCCCGACATAGAGTCACCGCCCACTCCTCACGTCGTAATAAAGGAGGAACGTGAAGACACACATAGTTGTTCGAAATGTAACCTAACCTTTACAAATAAGAGTGACTTGTTAGACCACGAAAAAGGGCTTTGCGGGAATATATTTAGAAAACATGAAGGTCTGGCAGCTCAAGTAGCAGAAACGGTAGCTCTTAACAGATTGGAAGCCGAAATTCACGCTTCCATTCAAAACGGAATAAGTGCAAGTGAAGACGAAGACTTCAATAGAGAAGATCGCGATGATAAGATATCAATACACGACAACGATAGAAAGATAAGGGTTCGTACAGCGTTAAGCGAGGAGCAGCAGCTGGTACTAAAGGAACATTACGCGTTGAACCCACGACCAAACCGTGAGGAGTTCAAGAGAATAGCTCAACAGATCGGTCTTGACAACAGAGTAGTACAAGTGTGGTTCCAAAATAACCGGGCTAGAGAACGGCGTATGACACAAACAATGACGGCCTCTGACCAACCATTAGATTTATCTACTAAGAAATCGAATCTATCAGTTACGTCGAGTCCCTCGCCATCGCCACCATGCAGCATTTCTGTCACACATTCCGACTCTGAGGAAGCAGTGAACCTCAGTCAGAAATCTTCGCGAAGTACAACTCCTCATCGTACCAACTATTTGAATACTTATCCACATTCCAATTGCTCATCATCTTCCTTCACCGATTTTCGATTATCTCCTTCACCAGGAGAAACTATTAATGGGCATAAACGATTACTACCACAAAAACTGCATGTCAACCCCTTAGTACCGATGGATAAACTCCTCCAATACAACGACATGGCAAACGCACGATCTCCCATTCTTAACATGCACTTGACGTCGGACATCAGCCGGCAAGGATCGAGTCCGTCGTACGAACGTCCTCATTGGGATGAAATGCAAGCACCGAGTGAGATTGAAGACGAAGCGACAGTACTTAAGAAAAGCAAACTCAAGCAAGGGGCCGAGTATAAGGAAGGCGAGGGACAATTCGTATGCGATCAGTGTGATAAGACGTTCGTCAAGCAAAGTTCCCTCGCGAGGCACAAATACGAGCATTCAGGTCAACGCCCATACAAGTGCCTAGAGTGCCCGAAGGCATTTAAGCACAAACACCACCTGACGGAGCACAAGCGGCTCCACACCGGGGAGAAGCCCTTCCAGTGCTGCAAGTGCTTCAAGAAGTTCTCTCACTCGGGCTCCTACAGTCAGCACATGAACCACAGGTTCGCCATCTGCAAGCCTTACAGGGATTAA
Protein Sequence: MKVQSSLMGVGGWYECLAAGWLADMRSKQVPTSTTSARRLAALIRPLAGGGSEGKPSEEEEERGGSPLGPGGPFSCSQCRGAYPTREQLERHETLHAPNTQVDTVKYSCKICHKSFANVYRLQRHMISHDESALLRKFKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHMTSKKCLVMNLKMGRIKPNNPALNPERSPSRKRTNAMMASQLNNNISPNGNSFLPMPAAFFASMSAQENNYHRPPLGQPGISFYMPPGMPMSPAGGIAPYSIPASISQFLEQLASSQYQQRKIENPASPKVTSPLSADPEDLIEEVTEDDDKRSEGSAELVMDIEDEEAVSIKKEQEERDSDLRSPSRNFESVPLNNNVHDAENPGFNSILESVSASVTKHFFRANMEKLSPVSGNNCPDIESPPTPHVVIKEEREDTHSCSKCNLTFTNKSDLLDHEKGLCGNIFRKHEGLAAQVAETVALNRLEAEIHASIQNGISASEDEDFNREDRDDKISIHDNDRKIRVRTALSEEQQLVLKEHYALNPRPNREEFKRIAQQIGLDNRVVQVWFQNNRARERRMTQTMTASDQPLDLSTKKSNLSVTSSPSPSPPCSISVTHSDSEEAVNLSQKSSRSTTPHRTNYLNTYPHSNCSSSSFTDFRLSPSPGETINGHKRLLPQKLHVNPLVPMDKLLQYNDMANARSPILNMHLTSDISRQGSSPSYERPHWDEMQAPSEIEDEATVLKKSKLKQGAEYKEGEGQFVCDQCDKTFVKQSSLARHKYEHSGQRPYKCLECPKAFKHKHHLTEHKRLHTGEKPFQCCKCFKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00281695;
90% Identity: iTF_00171643;
80% Identity: iTF_00273498;