Ccla003834.1
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- CSRNP3
- Assembly
- GCA_932526535.1
- Location
- OW052091.1:5050603-5052843[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.077 1.6e+03 -1.0 2.0 60 111 41 90 8 105 0.55 2 5 0.15 3.1e+03 -1.9 0.3 79 106 167 190 155 208 0.37 3 5 1.4e-102 2.9e-98 328.4 6.6 1 218 220 429 220 429 0.93 4 5 0.16 3.4e+03 -2.1 0.0 59 93 431 465 427 486 0.49 5 5 0.36 7.6e+03 -3.2 1.4 84 94 706 716 675 736 0.39
Sequence Information
- Coding Sequence
- ATGGAGAACGCAATATCAGAATTAGGCGTACAGCCACAAGACCATCTGGATAAGGACGTAACTGAATATGATAAAGACCCGGTTGGAGAGCATAGGGAGGAAGACGGTTTCCTTGCGATAAAAGACGAAAAAAATAGTGACAGTGATGCTCACAGCGAAGATCTTAGCTCTAATGATGATCAAAGTAATGTAATCAGTAGCAGTAACTCTCAGTTTTATGAGAGCAGTGACAGTAAAATAGACTATGCGGTAAAAATAGATGATAATGATACTCTAAGCGACATAGACGATATCAAAACTGACAGTGCTTCAGCTGACAGTGAAGACTCTGCACTTGGTAGTCTTCCACCAGATAGTGGTCTGAATGATCGGGAAGATGAAGCTCAAGACCGCTCAGAAGGTAGCGACTCAGGTCTAGGTTCAGAAGTCATCGACGATTTAAAAATACCAAGCTTCAACCTTGCTCTTCCATGCACAAGTAGCCTAAAAAGTGACAAATCATCAGATGATTTAGACCACAATAACGATAACTCCAGTAATAGTAGTGATGAGAACAATGTAGATGATGGCCATAATTCAATAGCACAAGTTAAGCCTCTCAGAAGTAGTCTTAAGAGAAAATGTAGTGATGATAACGACACTGAGCCACAAACTAAAAAGCGGAAAGAAAGTATTAAATTTGATAATGTTACCGTATTTTACTTTCCTAGAGCCCAAGGATTTTCATGTGTTCCATCACAAGGAGGTTCAACGTTGGGAATGGAATGGGAACATACTCATATACAAAACTTTACTTTAGCTGAGCATGCATTAGAGCAGAGAAGATTACATAGACAAATATTGCAGCAGCTGAAGAGTGAGCGTCATTCGTTACAAGGCGTGTCACTTTCCTCTAGCGAAGACAGTGATACTGAAGAAGAAGCGAGCGACATTTCTGAATCTGAGCTAGATTTAGACAGTTATTTTTTCTTGCAACCTGTCCCAACCAGGCAAAGAAGAGCTCTGTTGCGTGCAGCAGGAGTGAGAAAGATAGAGGGTTATGAAAAAGACGAATGTAGAGACATAAGAACATCGCGTGAATTCTGCGGTTGCGCTTGCAAGGGCACTTGTAACCCAGAAAGTTGTTCGTGCAGCTTAGCTGGGATAAAATGTCAAGTTGATCGATTGAACTTTCCCTGTGGTTGTACTAGAGATGGGTGCGCCAATACAACTGGTCGAATAGAATTCAACCCTGTAAGGGTAAGGACGCATTTCATTCAGACTCTTATGAGAATAGGTCTTGAAAAGAAACATGAAGAGAATCAAGAAGCGGCAAAGAGACAATGGCTGGAGGCGCACAATAATTCTACATCATGTTCATCAAATTCGTCATACGAAAGAGAGCGTTGTCTTAGTCATGAAGATGGAATGTTACGTGATGTTAACCTTACGCCAAGAGTGGAAGTTGAATCTTGTGTCAATACGGGAAGTTTTAATAATGTTCATTGTGATATGAATAATTCTACATCACAGAATAGTGACATGTCGTACGGCTATAGAAATGAGGCTTCCAATCATAATAATGTAAATGACAGTGGCATCATGCAATTTGAGAATACAAACAATCATCATGCACACAGTGATCTATACACATCCAGCATACTCCAAGGCAAGGGCCCACCGTACGCACCAGCCAACGCCATGGGTTTTGATACTATGTCAAATAACATACAACGGTTTCCTTGCAACCTAAACTACGCTTACGAGCAGCAAACAGAAAACCATTTCAAAGGCTTGCAAAGCTTCTCCGCAACCAGTTTTGAAGAGTTTGCGCACAGCTCCCAGATGACTATGTTTAGTCATTATGGGCATGTTTATGTACCAGACTACTTGCATAAATCAACTACAAATGTACACGACCATAACTCGCTACAATATCATAGCACACAACATAATCACTATGGGATGTACAAAAACACTTCTGATTGTGTAAATAATGACAACAAAAGTGATACTCATTATACCACTTTGATGACATTGCCATATCAACCTAGTAATAAGATGCAAACTGTAGAAAATGATGAGAACTGGTTCAGTCACCATACGCTGCTGAACTTGGATCATTCCGACCAGACGACTCAGGACGCGTCGGACTCACAGTCCCAGTCTGCGGAGGCAGCAACAGAAAGCAATAATGCCGAGACTACGGAAAATTTTGGTGAACTTATTAAAAAAACTATGGTAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MENAISELGVQPQDHLDKDVTEYDKDPVGEHREEDGFLAIKDEKNSDSDAHSEDLSSNDDQSNVISSSNSQFYESSDSKIDYAVKIDDNDTLSDIDDIKTDSASADSEDSALGSLPPDSGLNDREDEAQDRSEGSDSGLGSEVIDDLKIPSFNLALPCTSSLKSDKSSDDLDHNNDNSSNSSDENNVDDGHNSIAQVKPLRSSLKRKCSDDNDTEPQTKKRKESIKFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHTHIQNFTLAEHALEQRRLHRQILQQLKSERHSLQGVSLSSSEDSDTEEEASDISESELDLDSYFFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGTCNPESCSCSLAGIKCQVDRLNFPCGCTRDGCANTTGRIEFNPVRVRTHFIQTLMRIGLEKKHEENQEAAKRQWLEAHNNSTSCSSNSSYERERCLSHEDGMLRDVNLTPRVEVESCVNTGSFNNVHCDMNNSTSQNSDMSYGYRNEASNHNNVNDSGIMQFENTNNHHAHSDLYTSSILQGKGPPYAPANAMGFDTMSNNIQRFPCNLNYAYEQQTENHFKGLQSFSATSFEEFAHSSQMTMFSHYGHVYVPDYLHKSTTNVHDHNSLQYHSTQHNHYGMYKNTSDCVNNDNKSDTHYTTLMTLPYQPSNKMQTVENDENWFSHHTLLNLDHSDQTTQDASDSQSQSAEAATESNNAETTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040832;
- 90% Identity
- iTF_00122412;
- 80% Identity
- -