Ccla014196.1
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- Ncor2
- Assembly
- GCA_932526535.1
- Location
- OW052106.1:6901524-6924785[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-09 7.1e-06 26.2 0.0 1 43 361 403 361 405 0.97
Sequence Information
- Coding Sequence
- ATGTATGTTTCCAGGGACAGCAGCTACGTCCGCGGCGGCGGCGCAGTGGGCTCGTACCGCGGGGGGCGCGTGTCTCTCCTCGGCGGAGCCTACCTCCCCCCGCCCGCGCCCGCTGCACACCACCCGCCCCCCGCAGACCCTCCACCTTTCAAGAAGATCAGGCTCACAGCTGATAGGACGCCGCTGCCACATCATCAGCCGCTTAGGGTTGATACTAGGGAGCCGGTGAACCAGTACAGCACAGTTGAAGTACTATCTCCTAATCCACCATCGGAACCCACGATGGAGGACCAGAGCTTCAGAACCACTAAGGATGACTTATTACAACAAATATCCAAGGTGGACAGAGAAATGGCGTTATCAGAGTCAACGCTATCGAAGCTAAAGAAGAAACAAGAAGAATTAGAACAGACTGCGTCGAAGCCTGCTCGGGCAGAAGAGCCAGAAGAAACGGTACCGAGACACAGAAGTCTAGCGCAGTGCGTCTACGCAGAGAACAGGAAAAAGATCAGCATGGATAATAAGCGGCAAATGGCGTCGGCAGCGCACGGAGTGGTGTCACACCTCGGCCCTCCGGTCCTCTACCCGCTATACAATCAGCCTCAAGACACGGAGGTCTACCACGAGAACATCAGGCGACATCGAACGTTTCGGAAGCGGTTAGCGGAACACATACGGAAGCTTAAACTTGAGGCTGAGAAGCGTGAGGATGCGTTAGCGGAAGCCTACAGCAGACGAGCCGCCGACTGGTTGAAAAGAGTGGAGAGGATAGAACAGGGACAAAAGAGGAAGGCCAAGGACGCACGGAATAGAGAGTTCTTTGAAAAGGTCTTCCCCGAACTGAGGAAACAGCGAGAGGAGCGAGAACGGTTCAACAGGCTAGGTGCCCGCGTGAAGTCGGAGGCGGAGCTCGAGGAGATCGCGGACGGGCTGCACGAGCAGGAGCACGAGGACAAGAAGATGAGGTCCCTGACCGTGGTGCCGCCGCTGCTGAGGGACCCTAACGACACCACGCCCATTTACATCGACACTAATAGACGATGTATGGACATGGAATCGGAACACAAAGAGCTTCAGCTCCGGAACGTCTGGTCCCAGGCGGAACGGGAGCTGTTCCGGGAGAAATACCTCCAGCACCCTAAGAACTTCGGTCAGATCGCGTCCTTCCTGCCTCGGAAGAGCGTAAGGGACTGCGTCAGATTCTACTACCTGTCCAAAAAGGCGGAGAATTACAAGCAGTTACTAAGGAAGCCGCGGCAAAGGAGGTCGGCACGGAACCCGCCAAGAGTGCAGCCGGAACCGGAACTGCCAGCAGGGGTCACCACGAGGCTACAGCGAAGTCAGGGTTCAACAGCGCGAGGTACGGAGAATAAAGAGCCGACCTTGGAGGAAACGTTGCAGCAGGTCAACGATTCTGTCACCTGCATACCTATTCCGACCGCAGCGCCTGTACAGCAGCCTAGGTCGGAGTTAACAAGAACACCGCCGCTACCGCCCTCGCCGCCACCGGCGTCGTCGGCGCCTCCCGCGCCCGTCACGACTCCTACACCATTGTCGGTGGCCAACAGTCCGGCTGCAGCTCCAACACCTCCCGCGGTCGACGTGCCTCTACCACCGGCGACCACAGCATCCGTCGATGTCACACTTACCATTACTCCAGTTTCGACACCAGTAAGCACACCAATTAGTGTGGCGCCTACGTCATCTCCGGTCACGTGTATAACGTCGACTGCTGCGGTGGCAGCAGCCACGCTGACGGCGCCGGCGATGACGACCGGCAGCGGTAGTGGCAGTGGCACCAACAGCGCGAGTGGCAGTGGTAGTGGCAGTGCGCCACCCACGCCACAGCCGGCACAGCCGCCCACGCCGACACAGCCCCCGCCCACGCCAGAAACTGGTAAGTTTCTTGTTTGA
- Protein Sequence
- MYVSRDSSYVRGGGAVGSYRGGRVSLLGGAYLPPPAPAAHHPPPADPPPFKKIRLTADRTPLPHHQPLRVDTREPVNQYSTVEVLSPNPPSEPTMEDQSFRTTKDDLLQQISKVDREMALSESTLSKLKKKQEELEQTASKPARAEEPEETVPRHRSLAQCVYAENRKKISMDNKRQMASAAHGVVSHLGPPVLYPLYNQPQDTEVYHENIRRHRTFRKRLAEHIRKLKLEAEKREDALAEAYSRRAADWLKRVERIEQGQKRKAKDARNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPNDTTPIYIDTNRRCMDMESEHKELQLRNVWSQAERELFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRQRRSARNPPRVQPEPELPAGVTTRLQRSQGSTARGTENKEPTLEETLQQVNDSVTCIPIPTAAPVQQPRSELTRTPPLPPSPPPASSAPPAPVTTPTPLSVANSPAAAPTPPAVDVPLPPATTASVDVTLTITPVSTPVSTPISVAPTSSPVTCITSTAAVAAATLTAPAMTTGSGSGSGTNSASGSGSGSAPPTPQPAQPPTPTQPPPTPETGKFLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017298;
- 90% Identity
- iTF_00907008;
- 80% Identity
- -