Ccla016497.1
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- -
- Assembly
- GCA_932526535.1
- Location
- OW052110.1:5519646-5522096[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.4 5e+03 -2.1 0.0 4 19 168 183 167 186 0.89 2 5 3.2e-07 0.00025 21.3 0.1 1 45 273 319 273 320 0.91 3 5 9.2e-08 7.1e-05 23.1 0.1 2 44 327 373 326 375 0.95 4 5 2.9e-12 2.2e-09 37.5 0.0 1 43 379 421 379 423 0.97 5 5 1.9e-05 0.015 15.6 0.0 3 46 431 476 429 476 0.92
Sequence Information
- Coding Sequence
- ATGGATATTGACGACATGGAATTGGGTTTTGACACCGACTCAGAAGTTGACACTGAAGATGAAACTCTGTTCGGAACCGGAAACATACAGCAGCTGATTAACAATAATGATGACTTACTCAGCGAAAGAATGTCGCGAGGGGTCCCTTCCCTCCACCCCTCATTGACCCACAGAACACCCAGCCTGCTGGTTGAACGGGCAAAAGCAACATCGTCGGAACAAGCCCAATTAGATTTAGCTTTGGCGGCAAACAAATTACTAGACGAAAAGATGAAGCGACTCGAAAGAGACCTTGCCTCCCGTTTAAATGAGTGCCGGGAGAAACTGAGACTAGTTCAAAGTAACGCTGGACTAATTGACAAAAATGAAATTTTCCGCTATATCAACTGTGGTAGACCCTACTTTAAGGATAAACAGGGCTTTCCTGCTCCAGATAATGATGATGCTAAAATGGCAAAATCTCAGATGTATGACTTCTCCTTAGTTATTTCAGTACCGGGCTGGACAGTGAAAGACAAGTCTCAATTTATCACTATGATCCACAAAATGTCAAAAGATATTAAAAAAAATGAGCTGCATACAAAAATTAATAACTTAAAACGTAACTGTAAATCAAAAATTCCTAGAAAAGTTGAAAGAGAAATAATGGCCATTAGAAAGGAAATTGATAAAGTAAATAATATGTCTTTGAGTGATGTAGCTCTTCCAATAGAGGAGGAGTATGATTGGGATATGCTAGCAAACAAATTGAACAGGAGGCACACGGCACAGGAGTATCAATCATTCTGGAAATTATTCTTTCATCCTTCAATTAACAAAAATAGTTGGAGCAAAACTGAGCACATCTCATTACAGAAGCTTGCTTGTCACAACAGCCAACAAGATTGGGATGATGTAGCTGTCAAACTAAATACTGGCAGAACAGGGTACCAGTGTTTTGTATACTTTCGTACAAACATGACCAACTCTTTTACTGGAAAGAAATGGACGAACGAAGAGATAACATACCTTAAAAGATTGATTGAATATTTCAAAGAAGACTTTTATATTCCATGGGGTAAGATAGCTGCAGCGATGGAAAACCGTACTAAGATACAAATATACAATAAGTACATGAGACTTATTGAACAAAGGAAAGGCAGGTTCCTCCCCGAGGAAGACGCTGTTATTCTTAACTGTGTGGAAAGATTCGGAACAAACTTTAGGAGGATGGCTAACTATTTACCTGGCCGCTCTATGGTCCAGATACGTGCCAGATATCAAGTCTTGAGTAAAATGAGAGTGTCTACTGTGTGGACTGTTGAAGATGATAAGAAACTGATGAATTTTATGAGCAACCAGGGGCCAAACATGAACTTTTCAACTGCTACACAATTTTTCCCAGGCAGAAACAGAACAAAAATTAGAACTAGATACATTACCTTACTGAGATGGATGAAAAAACATCCCAACTTAGATTTGGAACATGCGCCACGACGCGGTGCACGGCGTTTGAATCATGGTCAAGCCAGTGGCACCCTGAATGATGCAGTGGAAAATTTAAAAAACTCTTTGGTTACAACAGTGCAGCAAAGGGCTAAGAAAACAAAGCTTACCAGAGAATCTACACATAAAGAATTAAATGATGCAATTGTAGTACTTCTTGTCAATTTTATAGTAAAAGAAAGAGAAGCAGAATCAAAGAAAGCTCCTTCAGAAGATCATATAGTTGTAGGCCCTGACCATGTTGTCTCCTATGCAGACCTTAATATTACTAACCTGCGCAAAAACATAATATTTTTAAATGCTCGTCTAGACAAGCCTAGTTACATGAACAGCCACTACAAAGATGATTATCCAACTTTAGGAGAAAGTAGTCATGATGTTTCTTTAGTTAAAGTGAAATCATATTCTCGGAAGGCCTCCAACCAAACTATATTGGTTAGAGATGTTCCTAATGTTTGGGGCACTCCTGTGCTAAATGTTAAAGGCCTACGATTGCTAAATATGCCAGGGCAACGAAGCTATGTGTTACCTCCCCAACTGGCAACTATTACGGGTTGTAGAGCTATTATGGCATTTGTGCTAGCTAACAGTCAATACAGTGAATCAATAAACCTACACGTACTTTGCAGACGGAACATAATATTAAAGGAACTTTTAGATCAGGTTCTTGAACGCTTCTATATATTATTCACGTGGCCAATGATCCTATCCAATGAAAGCCCTAATGAAAATATTGAGTCAAGTATACCAAGAATAGACTCTGTTTTTATTAGACCACCTACATTACCTGCTGCGCCTGAAGTTACAATTAATGTAAAATGTATAAAAAAATTCAAAAATGTCCAGATCACAGAAAATATAGATTTAGAAGAAGACGAGGCTAGCCAAGTTGAAATTGTTGTTGAGGAGAAAATGAATACTAGCGATGAGAAGATAGAAAAACTTCTTTGTGGCGAGGATAATTAA
- Protein Sequence
- MDIDDMELGFDTDSEVDTEDETLFGTGNIQQLINNNDDLLSERMSRGVPSLHPSLTHRTPSLLVERAKATSSEQAQLDLALAANKLLDEKMKRLERDLASRLNECREKLRLVQSNAGLIDKNEIFRYINCGRPYFKDKQGFPAPDNDDAKMAKSQMYDFSLVISVPGWTVKDKSQFITMIHKMSKDIKKNELHTKINNLKRNCKSKIPRKVEREIMAIRKEIDKVNNMSLSDVALPIEEEYDWDMLANKLNRRHTAQEYQSFWKLFFHPSINKNSWSKTEHISLQKLACHNSQQDWDDVAVKLNTGRTGYQCFVYFRTNMTNSFTGKKWTNEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDAVILNCVERFGTNFRRMANYLPGRSMVQIRARYQVLSKMRVSTVWTVEDDKKLMNFMSNQGPNMNFSTATQFFPGRNRTKIRTRYITLLRWMKKHPNLDLEHAPRRGARRLNHGQASGTLNDAVENLKNSLVTTVQQRAKKTKLTRESTHKELNDAIVVLLVNFIVKEREAESKKAPSEDHIVVGPDHVVSYADLNITNLRKNIIFLNARLDKPSYMNSHYKDDYPTLGESSHDVSLVKVKSYSRKASNQTILVRDVPNVWGTPVLNVKGLRLLNMPGQRSYVLPPQLATITGCRAIMAFVLANSQYSESINLHVLCRRNIILKELLDQVLERFYILFTWPMILSNESPNENIESSIPRIDSVFIRPPTLPAAPEVTINVKCIKKFKNVQITENIDLEEDEASQVEIVVEEKMNTSDEKIEKLLCGEDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00274376;
- 90% Identity
- -
- 80% Identity
- -