Ccla016408.1
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_932526535.1
- Location
- OW052110.1:2968626-2978116[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-15 7.9e-12 44.9 0.0 1 37 83 120 83 124 0.92 2 2 6.9e-19 7.2e-16 57.8 0.0 1 43 295 338 295 340 0.95
Sequence Information
- Coding Sequence
- ATGTTGTGGAGACCATACGATATGTGTTTCGGTTATGGCATGTTTTATTCTTGGAGGCTACCGGAGGTGGGTGAGAAGGCGCCGGCGTCTTCGTCCCCAAACCTTGCGGAGCAGCCTCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACACCACCTCCTGACTCCAAGCACTTGGATAACAGATTAAAGCGTGCAGTTCTCGAGAGCGCCAGCAACAGTTCTGGTCGCCGTGCGTACACTGAAGAAGAGCTCCAGGCAGCCGTCCGCGACATCCAGTCCGGCCGGCTGGGCACCAGACGAGCTGCCCTCATCTACGGCATTCCACGGTCCACCCTGCGCAACAAACTCAACAAGTTTGGCACAGTCGTCGACCACGTTGACTCAGACAACGACAGCGATGCCGACCGCGCCGACTCGCCCCCTTCCGTCATTCTCAAGATACCTACATTCCCCCCACCAGACGACAAAAGCCCATCCCCAGCTGGACAAATCCAAGCTCCCATCGCGCCGATTACACCAATGCTTTCTGGGCATCCGGGTCAAGCCTCACTCAAAGCACCCTCACAGCTGCTGCTCCCACCCTCAGTGTTCGCTGACCCTCCCTCAACACAACATCTGTTCACGTCCCTCAGTGACGTCATCGCTAAAAGCATCAGCCAGAAATTCCAGCAACCCTTAGATAGGCCGCATCACCAGCCTGGTGAGCTAATGTACGCGCGAGGCCCTGACCGACACGTGTCTGTCATTAAGACGCCGCCTGATAATCAGCGCTATCCGGCGCCTGGCAACTCCAAGCAAATGCCCAACAACAACGGCCAGCCGGCCACTGGTGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACAGGAACTACGACCGCGACAGTCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTCAAGGAGCGCCATCTCATGCGGCCGCGGAAGCGCGAACCGAAGCCGCCGCAGGATGCGAGCAAACCGCAGCCACCAAAGCCGCCGCCACCGAAACCCCCGACGAAACCGTTCTCCAACGGACTCAACGGGCCGGAGGCTCCGGGATATCCTCCCGGCTATCCGTTCTGGCCAGGCAGTGGATTCCCACCGCCGCCCGCTCCCGACTTGTACGCCTCGCACATGATGCGACGATTGCGCGAAGAAGCGCCACCGCCCGCCAACGGCTCGTTCTTGGAGGGCATCATCCGGTCGAGCCTGGAGCGGCCCGCGCTGCTGCAGCGACTGGCGGCCCCGCCGGGCGGCGAGCCGGTGCGGCGCCCGCCGGTGTCGGACGGCGACGAGCCGCCGGCGCGCCGGCAGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCCACGCCGCCGCCCGCGCCGCCGGCCGAGCCGCCGCCGCCGCCGGCCGCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MLWRPYDMCFGYGMFYSWRLPEVGEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRAYTEEELQAAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGTVVDHVDSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQIQAPIAPITPMLSGHPGQASLKAPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPGELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDASKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPGGEPVRRPPVSDGDEPPARRQRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -