Ccla000130.1
Basic Information
- Insect
- Caradrina clavipalpis
- Gene Symbol
- Kdm4B
- Assembly
- GCA_932526535.1
- Location
- OW052087.1:2438165-2451685[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-20 1.1e-16 61.1 0.0 8 89 914 992 908 992 0.90
Sequence Information
- Coding Sequence
- ATGCACTCCAATATGCTCTCACAACCTGTAGTGCTCCTTGAGAGGCTGCGTGGCAATGTCACGTGCCGCAACGACCCTCAGCCATCGCCCAGCGAGACCCCTGAGCCTGAACCCTCGGAAAATTATCCTGACAATGACAGTGAATATGCGCCTAGTAACGTAAGCAGAGAGACCCCTGCTGAACCTCCCACATTGCGAAGAAGACTAAGGAAAAAAAAAGATCATGACCGTGTACACCCCATGTCACTGCGATCGCGACGACTGAGCAAGCTTGAAATAAACAGGTTAATTGCGGAAAGTTGTACGCCTGTCAGGAAATCAACCTTGAGGCGAAACAAGAAGACTTCTTCGGATGATGATGAACCCTTAATATTGCAAGTCTCTCCAAGAAACACCGGTAGAAGCAGCAGTCCAAACACACAAAACGGCACTGCAGACAATAGAACGTCCAAGTTGAATATTTCCAAAAAGAAAACCCGCAAGAGTTCTTCCAAAAAGAGAACACCCAAGAAGAAAACGCCTAAGAAAAAATCACCGAAGGCGAAAACCTCCCAGAAGAACAAAAATCAACCTGCAAATGTTATTCCGGAATTTACATTCGCGGTCGTCAGGGAAGAGTCCGTTGTTATCCAGGATGAGCAGACCAGCAAGGAAAATCCAGATGATTCAGTCCGTTCAGAAATCCCGACTGATCCAATGGCCGTAAACTTTGCGGAAATCATAGGCTTTAAAGAAAGCTCGGTTAATCCCATTATACACTTCACAGAAGACCCGGTTGATCCGGTCACTTCAGATGATCCTGCCGCCCCGGCTGTCCAAGATACCAGGGATGACCCGGTAAACCCGCCCGCTGTATGCAACCCAAAGATTTCTGCAGTTCACTCACTGGCAGTTACAAATTCTTCGAATACCCGGCAATTAGTTTTGACACCAGAGGAATTGATTCTGGATGATAAATATGAAATGGATGATATCTCGGATCCTGGTTTCCAGGATTCTGGTGTCCGGAATGCTGGTGTCCGGATTCAAAATTTGCATTCTGGTTTTGGTGAACATCATGATTTCAGCAACATTGTTTTCGCCGATGATGGCATTCCGTTACACAATAATGATGATGAGGATTCTGACAATACACAGTCGCATGAAATAGTAAGGATGGAGGCAGGCTCGGAAATATCAACTCCAGAACCCATGCCTGGACCGAGTGGTATGCAGTACGAGTTTGAGGTATACGATCCTGTATACCAGGGTTACAAAGACGTACCCAGTCAGAGTGCAATACGAAGCTACGGGCTTCGTAAATCAGCATACGAACGTGTTTTGAGAAATACAGGGCTTAATCTAGAACGAGAAAGGTTCAAAAATAGAAGTTTACGCGCAGAGCACGAAGTACATGTTCCGGAAGAGCAGAGCGTCACGTGCATTACTTATAAGTGGCCCAATTTCCAAGATGTCATAAAGGCATCAGAAAAGGTACTGGCAGCTCGCTGCAAGGAATGTGTGCGTTGCGTGAGAATTGCCAAATTGATAAAAATATCGGCATTGCTCAAGAATACACAGCTGAATTCAAAGAGCAAAAGCAACAATGTGGCGGCGTTGCTAACTTGTCCCGTGATCGAGGACGGTGAGGTGGATGATGACGCCAGAGATAACAACGCCGTGCGTGCTCCGTCGCCGCCCAAAAAACAAAATCATCATTTATATTTCGATTTAATCCCTAGACATCCGACTGTGATGATCAAGTTAGGATCACACATGGTGCACGGCAAAGACCTTTTGTCCTTCTCGTTGGCACCGAGAACTGAAGATCGGGGGGGAAGTAGGGATTCGTCGCATCAAGACCCGGAGAGCCTACTTGATAGACTGTTTGACACTATGTCGCTCAGTCTGGTCGAAAATGCCGACGATGACAGGATAAGCCTGTCATCAACTAGTCCTAATAGCAATACTGCCGACCCAGAGGAATCAGAACATGATGAGCGAGAAGAGCCAGAGAGAGCGCGGGCGCCACAGGAGGCACAGGCGGTACAGGAGGCACAGGCGGTACAGGAGGCACAGGCGGTACAGGAGGCACGGGCGCCACAGGAGCAGTTGAGGAAAAAACAGGATGAGACTATGCAACGTTTGGCCCAGGATAAACAATTTCAAGAAAGCGCCCTATCTAAAAGCCATACTGCGATTGCCGAATTTGAAGCTTATAACAGGTTCGGGTTATCTCAAATACTGGAAGTAAAGAATAGTTGCCAGGCTGAAGTCATGCGCATCCAGGAACATGTAACCCGGCTAAATAAGCAGAACGAGGTCGACTTGGCTCGCATCCGCTCGGAGTTCCAAGCCGACCTGCAAGCGGCAATGGAGACTGAACGCCATATGGAAAAAGAGGTCGACAATATGGCCAAAGCTCTTGAAAATGAAAAGGATGCTAAGAGAATGGGTCCTGCAGGAAGTGTGCCAGATCGGGATGCTCCTGGTACCAGCGGCGGCGCTATTCCTATTTTAGGCGGGACGCTAGTGGATGCGCCCGTATACTTCCCAACTGTGGAAGAATTTAAAGATCCCATTGCTTTCTATGAGAAAATATGGCCGACAGCGAATAGATACGGCATATGTAAGGTGGTGCCCCCTGCCGGTTGGGACCCGCCACCCTGTGTCGTGAAGGAAGATATGAGATTCGTCGTAACCAATCAATACATTTCGCGACTATTCAGCCGCTGGGGCCCGGCAGCGAGGGAACTAAGTGCTATCAAGTTGTGTCTCCGACAGCAAAATGTTAATTTTACTCGACCACCATTGCTAGAAGGTGTGGAAGTGAATTTACCTAAGTTGTATCACCTCGTACAACGACACGGCGGTCTTGAAAACGTAATTAACAAGAATCGATGGGGCAGAGTTGCAGAAGATATGAAGTTCACTAAGATGCCACACACTGAGAAAAGGCTGGACCAGATATATGTGAAGTTTTTGCTGCCGTATGACACACTTTCTCACCAGGAGCGCCAGGAGATTATGCGGAAAGTGGAAATTGCATGGAATAGAAAAAATCAAAAGCTTTTGGACCGCGCCATGAATCCGTTGTACCGCCAGAAACGTATGCTGGGCTTAATGGAGTCTTCTGACGATGAGACGGAAGATGAAGACACGGCTATTGCGGTGAACGACACTGAAGATTGTGTTATCAAGGGCGGCAGCATGACCCTCGCTAGGTTCCAAAAGGTTGCCGCCATGGCGTTCGAGAATACATTCGGGCCGCGCTCGGAGACCCCTCCCAGCGCGATGTACATCGAGGAGCACTACTGGCGCATCGTGACGCTGGGCACGGAGCATATGTGCGTGTACGTCGCCTTCATCGACACCGGCGACGAGGGCTTCGGCTTCCCCAAAGATAAGAATGCACCATACGGAGCACACCCGTTCAACCCCAAGATGATAAGCAACCATCCCCGCAACATTCTCCGATATTTAGGCCCGGTGTTGGGCCTAACGGTGCCCACTCTACTCCTGGGGATGTTGTTTTCCACTTCCTGCTGGCACAAGGATCCTCATGCATTGCCCTGGTTGGAGTACCAGCACAAAGGACCCACCAGGATCTGGTACGGAATAGCAAGTGACCAGACTGACAACTTCAGGAAGGCGGTGGAGACACTATGTCCGACATCTTGCCAGAACAAGGGGCTGTGGCTGCCGACCGACATCTCGATGATCCCGCCGCACGTGCTGCGCGAGCACAACGTGAGCCTGTCGCGGCTCACGCAGGAGAAGGGCGAGTACATCGTGGCCTTCCCCAACGCCTACACGTGCTGCATAAACACCGGCTACACCGAGTCCGAGAGCGTCTACTTCGCGCCGCCCTCCTGGCTCGAATGCTTGTGGAAGATCTTCAAGGAGGCACGTGAAAGTTGCGAGCCGACTATGTTCGCTATGGAACATCTCCTGTACAACATCGGCAAAGACACGGAAGCTGCGACAGAGATCCTGAAGATTGCTCAGCCCTTGTTCGACAAGATGCTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAGGAGAGGGGACTGTCTTTCGTCAAAGATACTCAAGGAGCCGCCAAACTATCAAAGAAGAGGAAAGCGAACCCATTCAATTCGCAAGATGCAGATGAATGCGAATATTGCCGGGCCACTTTGTTCCTCTCGAAGGTAAAAGGGCTCACCGGCAGGGACTCAACGTTGTGTCTTGAACACGCGCTCATGTTACTAGACACTGACAAATACAAGGATTCGGAAGTATCACACCTAGTGGTGCTCGTGCACGTGAGTGTCAGTGAGCTGAACTCCATCTACGCCAACATGAAGCAGCGCCTCGGCATGCGCTCCGTGTAA
- Protein Sequence
- MHSNMLSQPVVLLERLRGNVTCRNDPQPSPSETPEPEPSENYPDNDSEYAPSNVSRETPAEPPTLRRRLRKKKDHDRVHPMSLRSRRLSKLEINRLIAESCTPVRKSTLRRNKKTSSDDDEPLILQVSPRNTGRSSSPNTQNGTADNRTSKLNISKKKTRKSSSKKRTPKKKTPKKKSPKAKTSQKNKNQPANVIPEFTFAVVREESVVIQDEQTSKENPDDSVRSEIPTDPMAVNFAEIIGFKESSVNPIIHFTEDPVDPVTSDDPAAPAVQDTRDDPVNPPAVCNPKISAVHSLAVTNSSNTRQLVLTPEELILDDKYEMDDISDPGFQDSGVRNAGVRIQNLHSGFGEHHDFSNIVFADDGIPLHNNDDEDSDNTQSHEIVRMEAGSEISTPEPMPGPSGMQYEFEVYDPVYQGYKDVPSQSAIRSYGLRKSAYERVLRNTGLNLERERFKNRSLRAEHEVHVPEEQSVTCITYKWPNFQDVIKASEKVLAARCKECVRCVRIAKLIKISALLKNTQLNSKSKSNNVAALLTCPVIEDGEVDDDARDNNAVRAPSPPKKQNHHLYFDLIPRHPTVMIKLGSHMVHGKDLLSFSLAPRTEDRGGSRDSSHQDPESLLDRLFDTMSLSLVENADDDRISLSSTSPNSNTADPEESEHDEREEPERARAPQEAQAVQEAQAVQEAQAVQEARAPQEQLRKKQDETMQRLAQDKQFQESALSKSHTAIAEFEAYNRFGLSQILEVKNSCQAEVMRIQEHVTRLNKQNEVDLARIRSEFQADLQAAMETERHMEKEVDNMAKALENEKDAKRMGPAGSVPDRDAPGTSGGAIPILGGTLVDAPVYFPTVEEFKDPIAFYEKIWPTANRYGICKVVPPAGWDPPPCVVKEDMRFVVTNQYISRLFSRWGPAARELSAIKLCLRQQNVNFTRPPLLEGVEVNLPKLYHLVQRHGGLENVINKNRWGRVAEDMKFTKMPHTEKRLDQIYVKFLLPYDTLSHQERQEIMRKVEIAWNRKNQKLLDRAMNPLYRQKRMLGLMESSDDETEDEDTAIAVNDTEDCVIKGGSMTLARFQKVAAMAFENTFGPRSETPPSAMYIEEHYWRIVTLGTEHMCVYVAFIDTGDEGFGFPKDKNAPYGAHPFNPKMISNHPRNILRYLGPVLGLTVPTLLLGMLFSTSCWHKDPHALPWLEYQHKGPTRIWYGIASDQTDNFRKAVETLCPTSCQNKGLWLPTDISMIPPHVLREHNVSLSRLTQEKGEYIVAFPNAYTCCINTGYTESESVYFAPPSWLECLWKIFKEARESCEPTMFAMEHLLYNIGKDTEAATEILKIAQPLFDKMLREEVTNRQMLQERGLSFVKDTQGAAKLSKKRKANPFNSQDADECEYCRATLFLSKVKGLTGRDSTLCLEHALMLLDTDKYKDSEVSHLVVLVHVSVSELNSIYANMKQRLGMRSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -