Basic Information

Gene Symbol
eral1
Assembly
GCA_947369205.1
Location
OX376308.1:18991733-18999466[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0027 0.36 12.4 2.8 1 23 485 507 485 507 0.98
2 21 4.3 5.8e+02 2.4 1.8 1 23 512 534 512 534 0.89
3 21 4.1e-05 0.0054 18.2 0.5 2 23 540 561 539 561 0.94
4 21 0.00063 0.084 14.4 0.2 1 23 567 589 567 589 0.98
5 21 0.00062 0.083 14.4 0.6 2 23 601 622 600 622 0.95
6 21 3.4e-07 4.5e-05 24.7 0.3 1 23 712 734 712 734 0.98
7 21 0.00016 0.021 16.3 5.1 1 23 740 762 740 762 0.96
8 21 0.048 6.4 8.5 0.9 1 17 768 784 768 785 0.94
9 21 3.2 4.3e+02 2.8 5.4 5 23 867 885 864 885 0.95
10 21 0.00078 0.1 14.1 3.1 1 23 891 914 891 914 0.98
11 21 0.00016 0.022 16.3 1.1 1 23 920 942 920 942 0.95
12 21 0.08 11 7.8 6.2 1 23 948 970 948 970 0.96
13 21 3.6 4.8e+02 2.6 3.0 1 21 1282 1302 1282 1303 0.94
14 21 8.9e-05 0.012 17.1 2.5 1 23 1337 1359 1337 1359 0.95
15 21 3.1e-05 0.0042 18.5 2.5 3 23 1370 1390 1369 1390 0.98
16 21 1.7e-05 0.0023 19.3 3.7 1 23 1396 1418 1396 1418 0.99
17 21 7.4e-05 0.0098 17.4 0.3 1 23 1426 1448 1426 1448 0.98
18 21 0.0002 0.026 16.0 4.4 1 23 1454 1476 1454 1476 0.99
19 21 2.5e-05 0.0034 18.8 4.0 1 23 1616 1638 1616 1638 0.98
20 21 0.00016 0.022 16.3 0.4 2 23 1642 1663 1641 1663 0.96
21 21 7.4e-05 0.0099 17.4 0.9 1 23 1669 1692 1669 1692 0.97

Sequence Information

Coding Sequence
ATGAAGCACTTATTTTTTAGGAATGTACAAAGTTTATTTGTGAGCAAACAGAAGTGTTACCGAGGAGGTGCCTGGCATTGCAGTATAGGTACACAAATTCGGCAAGATGAAAAGAAAATAACAAATACAGATATTTACGACTTGAATAAATCACATCAAAAATTGCTAAAAGTTGCTATTGTTGGAATGCCCAATGCTGGGAAAAGCACATTTATTAACTATTTAATTGGTCGAAATGTTTGTGCGACTTCATCGAAAGTTCATACGACTCGTACGAATGCAAAGGGAATATTTACAGAAGGAAACTCGCAAGTAATTTTTATAGACACACCAGGTTTGGTTACAGATCGTGCAGTTAAAAGGTATAAACTAGAAAATAGTTTTGTAACTGGAAGTAGTAGCAGTTTACAACATGCAGACATCATTGGTGTTATTCATGACGTTAGTAATGAATCCACTCGTACAAAATTAGACATTAAAATCATTAATTTGTTGCAAAACAATATAACTAAACCAAGCTTCTTTGTTTTTAATAAGATTGACGATTTGTCGAAGAAGCGAGTATTACTGGAATGTACACGGCTTATCACAATGAATTGTATTGATGGTAAGCCGATGTATACTAATAAAAATAAACGAGCAATGTTGATAAATGACAACTGTGGTTGGCCCCACTTCAAAGAAGTTTTTATGGTGTCTTCCCTAACAGGAGATGGAATGGGCGAAGTGAGAACATATTTGTTAAACAGTGCAAAACCAGGAGACTGGGAATATCCAGCAGAGGTTTATTCCGATCAAACTATTCCAGACATTATAATAAAATGTGTTAAAGCAGAATTATTGAATAATTTGCCTCAGGAAATTCCATATAAAACAACACCATGTCTTGAACTTTACGAAGTTACAAAGCAAGGTACTGTTAACATATCGGTTGTGGTAGAATGTCCCACCAAACGTATCGAAAGTTTAATTTCTGGCGAAAATCGTAGAAGATTAAAACATATAACTTTACTCACACAAGATGTACTTCAAAGGGTTTTTAAAAAATTTGTAAAATTGGACATTAGTTTAATATTCCAGATTCAACGATTAATATTCAAAATGAAAACAATTGAAGAAGAGATTCAAACAAATGTTGCAGGCGAAATTTATACTTACATAGCGATACCGATCAACAGTCTTAAGCAGAGCAATGACATTGTTCAATCCGTACAACCTATGCAAATTGCTTCAAATGTGATTTACAACGTTTTACCCCACGACGGTACAAATGAAAAAATTCAAACTTACACTCTAACAGATCAGTTTATCGCAACTTTGAGAGAAAACGATAAGGAGCACGATGTAATTGAAAATCAGGAGAGTTTGAGACCTACAGTGATAGAACAAATCAGTAACACCAGGAAGTCGGTTATTTTGGAAACAAATTTAAATAAAGATGAGGCATTGACTTACGAATGTTTGAATTGCGGTGAAGTTTTTAAAACGCGTCTGTGTTATCGTAAACATGTAGAAAAACACAAAGAAAAACTTTACAAATGTGACGAGTGCTCGGCAAGTTACAATTGCGAAATTAATTTCAAGTTACACAAAGTTGTGCACACAAAAAATGCTACCGTCTGTCCAGTGTGTGACAAGTCGTTTAATCGAATGGCCAGTTTGAAAAACCATCTTACTTTTCACGAAATTGAAGAGACCTTTACTTGTACCGAATGTTGGGCTGCATTTGATACCGAGGAAGAGTACAACAAACACATCCAAAACCATAAAAGTGAGGATCAGTCGTTGCAGATATTTTTGGTTTGTTCGGTTTGTGACGAAAAATTTGAAGATCGTTCCAAATACAAGCAACATATATTGTTTCATACAGAGAGAATTGCATCTTTAAACGCGCACACTACACGCTTCCACAGAGCTGATAAAGATAGCAACGATATTGTAGAACTCATGCAACAAATAGACCAACTGGAAAACCAAATGAACAATAAACACAATCTTCCGGTAAATGATATCCTTAGAAGAAACGTAATTGAAAACGATTCAGAAAAATTTGTAAGACTGGCCGATTCAAGTGTCGAAGGTCCTATACAATATTTTCTAGTAAAACAGAAGAAAACCACCGAAGGACTGTGGTATGCATGCTCTTATTGTGAGAAGGAGTTTAAAAAACCTTCAGATTTAATTCGTCACATTCGAATTCATACCATGCAGAAACCTTTTAAATGTAAGCATTGTAATCGTCGGTTTTCGTTAAAATCAACTCTCAAAAATCATGTAGTCAGTCATGCTAATTTTCGTAATTATGAATGTGTTATTTGCAAGACTACATTCAATTCTAAGAAAACTTTGAAAAATAACTCCAAGATTGATGATAAATTTGTATGTGGTTCTTGCAAGCCGGTGGCTTCTGATTTTAAAGTTAAACGCGTTAATGTTGAAAAATTGGAAACTTTAAAGGTTCTTAATAATATAAATATCGACATTGAATTAAAACAACCAATGGTGGAGAGTTCTGAGGGTTTGGTACCCATTATTTCATCCAAAGCAAAGATTCATTTAGACAGTGCTAACACGAATAGGCCTAAGCTGCATAGGTGTCACTGTGGAGCTGAGTTTTTTCAAATTAAGAAACTACAGCATCACATGCTTATTCATACCAGTGAAAAGAAATTTAAGTGTTACGTTTGCACCAAAGGTTTTCACAACTCTCAAACATTAAAAGAACATATAAAATCGGTTCACAATGGTGAAAGAAAGTTCTTATGTAGAATATGTGACAAACGTTTTGTTACGAACACAATTTTAAAAAGGCATATGATCACACACAGTTTTGTCAAACCTTACATTTGTCCTTACTGTAAAAAGCGCTTCAAAACGATCCTACATTGTCGTCAGCACATCAAACTTCACAAGAAGGATATTTTGTTAAATGCATTGACAGCAGACGAGTCTAACAAATTTACTAATAGTTTTGTGGCAGAAGCAGCTCTTCCTGAAAATATGTTTGCTAACTCGTTACCCGATAATCCTTACAATTTAGATTTAAATTTTGATAATTTAACGGTCTCGGCTGGTATATCTAGTGCTTCTAATCTTTTATCTGAAGCTTCTGAATCGGTAGAACAGAATAAAGATGAATCTCAGACTCAAATTTTATACACCGATAAAGGTAATAAAGTAATTGTTTCCACGCCTTTGGATATTCCTCAGACACATGATGGAAAGAATAAATTGGAGCAACAGCTGCTTTTAACGTCGACCGCTTTACCAAGTTATAATGAATCGACAAAAAATATTACTTCAGATAATTTAGAAAATGTGGACGATTCCATTGCAACTTTACCACAAGAAAATTCCACCGTTTTCTTAAATTTTGATGACCTAAATTTAACAACTTCTAATCTCTACAGCTCCTATCCAAATTTGAAAAATTTTGATCAACTATTGGGAGAAATAAGTGAAATTCAAGATAGCAACATTTTGTTGACTAGTGACTCCGGTCTAAGTCAACTAACCGATTCCCAATTGGATACTTCAAATTTTGATGGATTAATGCCGTTTGCCTTCAACACCAACATATCCTTGAATAACGTTACCTTATCCACTACGAATCCCTTTCCAAACGTCATTCTTTCGAACGTAAATGAAGATGTGTCCGAACTTAACCAAGTGCCACTTTCTGATCTGCCGTACGACGTCAAGAAAAGTTCTCGAGTAGAAGAATCTCAAAAATTGTTGGAAGAAAAGGACGAAAATCCACTTTTAGCTAATCTTCTTGAAACTTCTTCCAGTAGCGAGCCCATAATCCCAAACACAGACGAAACAATTTTTGAAAACGTTGATTTTACCTGCTCTTCCTGTAAGAAATATTTGGATAATGTGGAAGATTTAATGCATCATTATTGCTCTGGAAAAGTTGCTGCAGAAGGAATTTCCAAAGAAAATCAAAATGATGGGTTACCAAGCTATGAAGATTCTATTCAAGCAAAAAAGAAGCTTAAAAACGGCCATAAGTGTAAGAAGTGCAATAAAGCCTTCACTACTAAGCTCGGCTTGCAAAAGCATGTCGGCGTTCATAAAGAGAAAAAAAATGCAGCCTCAAATATTTGTTCCTATTGCGAGAAGGGTTTTAAAAAGCACTCGGATTTGCTGAGacacgttaggactcatacaggagagaaacccttcacttgtgataagtgccaaaagaattttacactcaaatccacgttggaaactcatcgaaggactcacaatccagaatcgcatcaaaaatatgattgtggtGTTTGTGGCACGCATGTCAGCTCCAAAGCTAGCCTACGAGTTCACATGATGATGCATACCGGTGCAAAACCTTACCAATGTTCGGTGTGTTTTGAAAATTTTAGGACTTCCGGTCACAGAAGATCTCACATGAGAACTCATCTAAATAACAATAAAGCTAGAAAGCAGTCGAAATCGGCTAAAGTAACCACCATGCTGCAATCTGTTATCACGGAAACTCAAAATAGCGAAGAACTTTACGAGGAGGTTTTACTACTAAACAACTCACAGCACTTGCAAGAAAATAAGGAACTTAGTCTACATGACTCGGAGGTTCTCTTTCCCAGTCAAACGGTTCAAGTGGATTCTTTGATTTTGCAGCAATTGCAACAAAGCTGCGCTTTGTTAGACGATGGAAACGAAAGAATTCCACCCTTTATTCAGGTCGATATTAACAACTATGGTGAAATAACGAACGTCAAGTCTATTCGAGACATTCAGGAATCGTTCAAAACTACCGGGTCAGATAAAAGCACTGAAAATATTTACTTAACAGAAAAGACATCTCTTGAACGGAATTTTGAGTGTGATATTTGCCATAAGAAGTACACCACTAAATCTGTACTCACAAAGCATAAAAGAATACACAATAAGTTGAATTGTGCAAAGTGTAATATCAAATTTACGCAATCTGAAGAACTTCAGGAACATTTAAAAATACATAATGTGCTTCGGCCCTTTGCTTGCTCTCTCTGTGACAATAGTTTTAGCCTCAAGAAAAATTTAATTACGCATATGAAAAGAATACATAGCACTAGTTTTCCGTGA
Protein Sequence
MKHLFFRNVQSLFVSKQKCYRGGAWHCSIGTQIRQDEKKITNTDIYDLNKSHQKLLKVAIVGMPNAGKSTFINYLIGRNVCATSSKVHTTRTNAKGIFTEGNSQVIFIDTPGLVTDRAVKRYKLENSFVTGSSSSLQHADIIGVIHDVSNESTRTKLDIKIINLLQNNITKPSFFVFNKIDDLSKKRVLLECTRLITMNCIDGKPMYTNKNKRAMLINDNCGWPHFKEVFMVSSLTGDGMGEVRTYLLNSAKPGDWEYPAEVYSDQTIPDIIIKCVKAELLNNLPQEIPYKTTPCLELYEVTKQGTVNISVVVECPTKRIESLISGENRRRLKHITLLTQDVLQRVFKKFVKLDISLIFQIQRLIFKMKTIEEEIQTNVAGEIYTYIAIPINSLKQSNDIVQSVQPMQIASNVIYNVLPHDGTNEKIQTYTLTDQFIATLRENDKEHDVIENQESLRPTVIEQISNTRKSVILETNLNKDEALTYECLNCGEVFKTRLCYRKHVEKHKEKLYKCDECSASYNCEINFKLHKVVHTKNATVCPVCDKSFNRMASLKNHLTFHEIEETFTCTECWAAFDTEEEYNKHIQNHKSEDQSLQIFLVCSVCDEKFEDRSKYKQHILFHTERIASLNAHTTRFHRADKDSNDIVELMQQIDQLENQMNNKHNLPVNDILRRNVIENDSEKFVRLADSSVEGPIQYFLVKQKKTTEGLWYACSYCEKEFKKPSDLIRHIRIHTMQKPFKCKHCNRRFSLKSTLKNHVVSHANFRNYECVICKTTFNSKKTLKNNSKIDDKFVCGSCKPVASDFKVKRVNVEKLETLKVLNNINIDIELKQPMVESSEGLVPIISSKAKIHLDSANTNRPKLHRCHCGAEFFQIKKLQHHMLIHTSEKKFKCYVCTKGFHNSQTLKEHIKSVHNGERKFLCRICDKRFVTNTILKRHMITHSFVKPYICPYCKKRFKTILHCRQHIKLHKKDILLNALTADESNKFTNSFVAEAALPENMFANSLPDNPYNLDLNFDNLTVSAGISSASNLLSEASESVEQNKDESQTQILYTDKGNKVIVSTPLDIPQTHDGKNKLEQQLLLTSTALPSYNESTKNITSDNLENVDDSIATLPQENSTVFLNFDDLNLTTSNLYSSYPNLKNFDQLLGEISEIQDSNILLTSDSGLSQLTDSQLDTSNFDGLMPFAFNTNISLNNVTLSTTNPFPNVILSNVNEDVSELNQVPLSDLPYDVKKSSRVEESQKLLEEKDENPLLANLLETSSSSEPIIPNTDETIFENVDFTCSSCKKYLDNVEDLMHHYCSGKVAAEGISKENQNDGLPSYEDSIQAKKKLKNGHKCKKCNKAFTTKLGLQKHVGVHKEKKNAASNICSYCEKGFKKHSDLLRHVRTHTGEKPFTCDKCQKNFTLKSTLETHRRTHNPESHQKYDCGVCGTHVSSKASLRVHMMMHTGAKPYQCSVCFENFRTSGHRRSHMRTHLNNNKARKQSKSAKVTTMLQSVITETQNSEELYEEVLLLNNSQHLQENKELSLHDSEVLFPSQTVQVDSLILQQLQQSCALLDDGNERIPPFIQVDINNYGEITNVKSIRDIQESFKTTGSDKSTENIYLTEKTSLERNFECDICHKKYTTKSVLTKHKRIHNKLNCAKCNIKFTQSEELQEHLKIHNVLRPFACSLCDNSFSLKKNLITHMKRIHSTSFP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00268854;
90% Identity
-
80% Identity
-