Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_947369205.1
Location
OX376308.1:4162556-4179956[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-17 9.7e-15 55.1 0.1 1 45 281 326 281 326 0.96
2 2 4.5e-18 3.5e-15 56.5 0.0 1 43 630 673 630 675 0.95

Sequence Information

Coding Sequence
ATGATTGACTGCTCCTATTCTAGGTCAAATTTTCATTTTGTATTTGGGTTGGAAAGGATCGCTGAGGAGTTGATGGGACGAAGGAAATGGAAACTGTATCAAGCATCCATATCAAGAAATTGTCTTCAACCTATAAACAACAACGTGGAAAATATAAAAGAGAACGACGAATATATAAAAGAGCAGGCCGACTATTCCGATTTCAATCAAAAACGGTCAGAAGCCGACGTAAACTGCAAAGATATAAAGGAAGAAGTAAAGTTGACGCAGTTAGAAGAAGAAGATCGACTAAAGGATTGGTCACCACAGAGCAAGTGCTATTTTTGTGTAGACGGCAAACTGGATAGTGAAAATAGTACCAGTCACGGGGCTCTGAGTCCCCAACAGACAGACTCGGATTCAAGTGATATTCACAGCGAACCTGAAATAGCCCCGACTTTAACACCGCCCGTTGGGATCAACAATAACCACAATATGACAACAATAGAGAGCGTAACTTCCATGGCAGCGCTGGCGTCTGCGGTGGCTGCACTTTCGGGGAATCCCTCGTGTGCACCAAAGCCTCCTTTGGGTTTTTACCCTCCCACCTTAATTCCTTCAAATTGGTACCTTGCAAATATGACCAGGACTATCCAATCCGAGAGGATGGAGATCGAAAAACCTGGCGAACAACCCTTGGATCTCAGTTCGAAAGGAACTAACTGTAGTAATAGTCCTGTGGAACACAAAGTGGTACCGCCGGTTAACACCAGGATACCAAGTTTGGAAACGAAGCAAATTTTCAATTCTGATTTTAGAGCGAAGCCCCGAATGTCCGCAATTGCAGGCAGAAGAACATACACCGAAGATGAATTGCAAGCGGCCCTTCGGGATATTCAATCGGGGAAGTTGGGAACACGGAGAGCCGCAGTAATTTATGGTATACCTCGATCTACGTTAAGAAATAAAGTGTACAAATTAGCAATGGAACGTGAAAGGGATTCGCACCTGAGATCGGCGCCAACGTTAAAAATCGAAGAGGAAGAAGTGGTCGACGACGATAAAGAGTTATCGGGCGCCGAAGAAGAAAAGGAAGTCGAAAAAGCGTTGCAAGGACCTTTACTATCGGTGGCCGATATTCTGAGATTTTCCAATTTAGATAATCAGGAATCTTTAAAAGCGGCGATTTCGAAAAATAAAGACGGCTTGGATTGGACCGGTTTAGAGCATAGCGCGGTCGGACCGTACATACAAAGTATTTTGATGGCTTCGGGAAACCAAAATGCTTCCGATAAAGATATGAATCCTTTAGTGTTGTTACCCGAAATTGTAAAAAGGATCATGGAAGACGAACAATTAGCTAAAGAACAAAATCAACAATGCAACGGAGAGACGGACAAAATGATGCGATCGAGTCCCAATTCCGTTGCGACCAAGTGTAAGTCGGAATCGTCGGATATGGAAACAGACGAGTCACCTTCAAATGTGATACTTAAAATTCCGTCCTTTAAACCAACTTCTAGTAAAAACGGTAACGATCTTTATAGAAATTGTACAGATTCTGCGCCTCTTGTATCGCCGCCGGTTACTAGCGATTCGGGATCTCCGCCAATTTTACCGGGACGGGGAATGACGTTAAAGGATGTTAAAGACGTTATAGCAAAGAGCATTAGTCAAAAATTTCAACAACCTCCGGAACCTTCGAGAATGACGTCGATGATGGAGATGGACTTTCGGGGTTCCGGATTTACGCCGCCAATGGGTTCCATGCCGCAAATGAAAAGTCAACAAGACCTGAACCGATCGTATTCTTTGGCGCATTCGAAACCGCCTCTTGGGGCGCCGAATCAAAGTACGGCGACGGGAGGCAAAGGTACGAGGCCGAAAAGAGGAAAGTATCGCAATTACGACCGCGATAGTTTGGTGGAAGCCGTCAGGGCGGTACAAAGAGGCGAAATGTCGGTACATCGAGCCGGAAGTTACTACGGGGTTCCTCATTCGACTCTCGAGTACAAAGTAAAAGAGAGGCATCTGATGAGGCCGCGCAAACGAGATCCCAAACCAAACCCGGTGGACGAAAAGATAGCTTCGTTGAAACAAAACGATTTGCGAGTGGCCAACGCAATAGCAGAGAAAATGAAGCCGGTAATTAAACATCCCCCGTCAAAATTTCCCCCAACGTCGCCGAACGGAATGAAGCTTCCGATATTCGATCCTAACATAGCGCCCATAGGGTACAATCCAGCCCCTTTCCCATTTTGGCCGCATTCTGGATTTCCCCACATCTCCTTAGATTACAGTCGAAATCCGTCGACTTCGTCGTTCCCACCTAATCCCGAACAGTTTTTCGCGTCGCAAATGATGCATAAGTTACAAGAGGATACGGCTAGAATACATCCGAATGTAGCGCCCACGTCTGCTTCTGGATCCGCTCCGCCTTTGCCTAAAAATGCCCGGCAAATCGCCGAATCGTTGCTGGAAGGTACGGGTACTAACGGTTCGTTTTTGGACGGAATTATTAGATCTAGTTTAGAGTCGGGTGTTCCTTTGGGACACGAGGACAAAACTAAAGACGAAAAGAACGTCGCACCGGAAAACATGTCAAACAAAACCTTGTTAGATCAACTTTGTCGTAATAGTCGATTAACGCCGTTACCAAAATCACACATTTCAGAATCGAACAGTTCTGGAGACGAGAATGGCCGAAAAGCGAGTCCTCTGAACTATAGCACGACGGCGGATGAGATGTCGCCGAGTTATAGTTACGTGGGTCAGGGAGGCGATTCGTCGCCGCGGAGGTTCGAAAATTCGGAGATTCACACGATCGAGCTTTCGAACGACTCGAACGATTCGATGGGGAAAGAAGAGGTGGAACGAAAGCCGCCTATGCCTCCCGGTCGGATTTATTTGAAGCAGGAGCTGTCGAATCCCGAAAATTTGAAGCCCGAGATGTTGGTGCGTTTTCGCGAAGTGTTGCAAGACGTCGATAGGAACGGTTTAGGCGAATCTGTGACAGGAAGTGCCTCAGAATCAGATGTGGCTCAAGACTGA
Protein Sequence
MIDCSYSRSNFHFVFGLERIAEELMGRRKWKLYQASISRNCLQPINNNVENIKENDEYIKEQADYSDFNQKRSEADVNCKDIKEEVKLTQLEEEDRLKDWSPQSKCYFCVDGKLDSENSTSHGALSPQQTDSDSSDIHSEPEIAPTLTPPVGINNNHNMTTIESVTSMAALASAVAALSGNPSCAPKPPLGFYPPTLIPSNWYLANMTRTIQSERMEIEKPGEQPLDLSSKGTNCSNSPVEHKVVPPVNTRIPSLETKQIFNSDFRAKPRMSAIAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDSHLRSAPTLKIEEEEVVDDDKELSGAEEEKEVEKALQGPLLSVADILRFSNLDNQESLKAAISKNKDGLDWTGLEHSAVGPYIQSILMASGNQNASDKDMNPLVLLPEIVKRIMEDEQLAKEQNQQCNGETDKMMRSSPNSVATKCKSESSDMETDESPSNVILKIPSFKPTSSKNGNDLYRNCTDSAPLVSPPVTSDSGSPPILPGRGMTLKDVKDVIAKSISQKFQQPPEPSRMTSMMEMDFRGSGFTPPMGSMPQMKSQQDLNRSYSLAHSKPPLGAPNQSTATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRVANAIAEKMKPVIKHPPSKFPPTSPNGMKLPIFDPNIAPIGYNPAPFPFWPHSGFPHISLDYSRNPSTSSFPPNPEQFFASQMMHKLQEDTARIHPNVAPTSASGSAPPLPKNARQIAESLLEGTGTNGSFLDGIIRSSLESGVPLGHEDKTKDEKNVAPENMSNKTLLDQLCRNSRLTPLPKSHISESNSSGDENGRKASPLNYSTTADEMSPSYSYVGQGGDSSPRRFENSEIHTIELSNDSNDSMGKEEVERKPPMPPGRIYLKQELSNPENLKPEMLVRFREVLQDVDRNGLGESVTGSASESDVAQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00269680;
90% Identity
iTF_01293533;
80% Identity
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