Basic Information

Gene Symbol
JARID2
Assembly
GCA_947369205.1
Location
OX376303.1:35476193-35486903[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-21 6e-18 66.1 0.0 7 89 1488 1568 1483 1568 0.93

Sequence Information

Coding Sequence
ATGGTAATTAATCGAAGAGATATGAAGCGAAGACATAAAGGCGACAATAATACCTGTAGTTTATTAGATGAGAGTCCGAAAAGAACAAAGGTTCATGCACAACGTAAATTTGCGCAGGGATCTAACGTGAGTAGTCCCATGATAACTCCAGTCAAGGACATTGAAAAACAAGATAAATCAAAATCAGATGTATTTTCTGAACCGCAAGATCTTTTACCTGTTAACCGACCGCACACAGAAGATTTTCTCACATTTCTTTGTTTTCGTGGTACTTCAATGCTACCACCAACTTTAAACTTCTTTAATGTTGCACCAGCAGACACAAGGACACATTCAAAGGCAACGGAAGAAGATCCAAACGACTCTTGTCCTCCCATTGCAAATATTAACTTGAAAAGTGTAACGGGGGCTAACGAAAGACCTTTTATAGCTTTTGGTGTTCGAAAACGTGCCGACCCCGTTTTAGTTAGTAAGCACATGGATAAAAAGAGAAGGCATGCTCTTGCTTTACAAGCACTTCGTCGAAAATATCAAGAACAAAAAATGGCTAAAATACGTGCGGTCACCATCAGTAAATTATCTGAAAAAGTATCGAGCAAAAATAACTTGGTTCGTACCAGATCCGTCACTAAAACTGAAACTGCTGTCAAGAAACACATTCCTGCGAAAACTAAAGTAAAAATTGTATCCACTAAGCATGTTAAACTGGCAACCAGGTCTTCCATCAATTCTACGCTTCGGCAGGCAATAAAAAATCCAATACGAAGACATATTCCAAAAAAGAAAATGTGCCTGAGAAGTTACAGAGGAAAATTTATTCAACACGAATTACAATTGAAAAAGTCAAAAAAACCAAAAATTGCCAACAGAAAGCAAAATAAAGAGAGTTCTTCAGATTTTTCGTCTGATGATGATCAACCTTTGCTAAACACAGTTAAAGTTAAATCCAGCAAAATGGCTGTATCGAAAAAGCACAAAAAAAGTGTAGTTAATCTGAAAAAGCCTGCAGAACTGAATTACAGAATTACAAGAGCATCTTCATTGTTTGCTCCAAAATTAGATCAAACTGTAAAGCGCAAAATACAAATATCTAGATCATCAATTATAACTAAATCGCCATTTGTTAAACTGACACCTCCTAAAAATATACCGAGTACGGTTACTGGTGAAAATTCAAAATTAAACAACGTGAAATCAGATAAGTCAATTGAGGAACCAAAACCAACAGAAAAGAAGAGTGAAAGAGATCTAAGAAACTTAAAAAGAAGTGACACCAATATTGATAAGAATGCAAAAAAGACTGATTCCCATGATAATGATGTCAAAAAGAAATCTAATAAATTAGATTCATCTGAAAAACTAAACAAAAAACCTTTGGTGGTTGAGAAATTGTTAACAAAAAGCCCAGTTATTGAAGTGATAAAAAAATTAGAATTTCCTTCAGAAAATATTAAAAAGTCGAATAACTTGCAACTAGATCCGGATAGTACAGAAAATCCATCAGAAAAGAGGACTAAAAGAAAAGTTGAAGTTGAAACAATAAATAATGAAAAGAATTTAAAAGCAAAATGTGATAAATTAATCGAGAATAAAGAGGGCAAATCTGACAAAAGTGAACCTTCCCAAGAAAAGACAACTACAGTTGCATCAGAAAAGAAATTGAAGAGGAAAATTGAAGTACCACAAGAAAAGGATGTCAAGACAAAGTCTAAAGCTGAACTTCCTTCTCCTGAAGAACCAAAAGTGTCTCAAAGACCAACCAGAAAGACGAAAGAAGCAGCTGCTATTTATATGGAAATTCTTGGTCACAAACTTGTTCATGATGGCGAAATTGACGATGACGATACTTCTATAGATAGCTTTCCAGAGCTTCCAAACGTTCGTAAAACAGAACAGAGGGAAATTGAAATGAAAGCTACAGTGAAATCTAAAACTGATTATAAACACAAAGAAAGCCCTATCGTAGTAGAGAAAGAAAAACGGATTGCTAAATCGGAAGATAAATCTACAATAATAGATCATAAACAATCCACAGAAAATAAGCCCATCTTAAAACAACCAATAAAAAAAGATTTAGATAAGAAAAGCAATTCCAACGTTACTTCAAACAAGGATGTAATTGCTGAACTTGCCAAGAATACAGAAATGTGCAAACCAGAAGATAAATCGATTAAAAACGAAATTGAAAAACGCACAACTAGAGGTTCGCTACACAACAAATTAACTGTTCTTGAAGGTTCCAGTGATTCTGAAAATGATTCCATAAAAATTACGGTTAAAAAAGACATAAAACAAACCAAGAACACTAAAACAACAAAAGAAAATCCTGAACTTAATACAACGAAAGAAAATCCTGAACCTAATCCAGTTAAAGAAAATCCTGAGGCTAAAACACCAACAGAAAATCCTGAACCTAAAACAACAAAAGAACATTCTAAGCCTAAAACGATAAAAGAAAATCTTGAGCCTAAAACAAAAGAACATCTCGAGCTTAAACCATCAAAAGAAAATCCTGAGTCCAAAACAACAGTTTCGAAAAATAATTCGGATAATCAAAAGGAAAAACCAGTAGAAAGCACAAAAACTGAAAAAGTAAATGATAGTGAATCTGAAAAATCAATTATATCTCAAGAAAAAACAAATAAAATTGTTAAGAGGGTGAAAAAATTAGATAAGACTCCAGAAAAGAAGCTCGATAATAGTTTTAGTGATTCTGATGAAGAACCGCTTTCGAAACTAGCACAAACTATAAATAAATCAAATGATAAAAAATCCAAAAATAAAAGAAAATCTGAAGAGATATCGGATAAAGAAATTAAAGTTAATAAAAACGTAAAGCAAATGAAAAAGGATAATAGTGAAAAAATCAAACAAGAAGAACCAATTTTAGTCGTGAGTGGTAAACCAAAACGAGAATGTACTAAGCGTCCTCAAAATTATTTACCCTTATTTTCTTCTTCAGAAGATGAAGAACAATATTTTTATGGGTTTGTTAAAACCGAAAATGTTAAATCGAATAAAACCACAAAAATGCAAAATAAGTGCCATGCTACACCAACCGCTGATCTTTTGTGTAAAGATGTTGATAAACGTTTCGGAAAGGGTAAAGTAAATATGTCTACCGAACAAATTGAGAAATGGCTGAATGACAGTGCCATGGCAGGAAATGCAATAAAGAAAGAAGATGATGAGTTAATGAAATTTATCGAAAAAAATTTGTTGGACAAACTAGATGAAGATATTTTAAAAGAACCTGCCACATCGGCAAACATGATTGATAAATGTAGTGTGATAGAACATAGAAAAGAAAGTCAAGTTTCTGAAATAATGAATTCTGCAACAAATTTACAATTAAAATTAATAGATCGTAAAACAATATTTAGTAAGGAAAGAAAAAGTGCATTACCGAGCGTTAATGCATTTTCGGCTAATAATGAAAGCAGTGTGTATGCTTTTGAAGCAGATACTGAAGACACAGTGAAAACACCTTTCAGAAGACCTACACGACGACCATCGAGCACTACTACGACAAGATCAGAGGACTCTTCCAAATGTGAAAATCCAAAATCGCTCAAAAAAATATGTACATCTTCTGCAGTTAAGCCTAGTACATCGAAAGATACCAACAAACAAGAGGTTTCTCTCACGTTATCAACTGACGAATCTCATAACTCGAATTCTATTGCCATACACTTAGATTCGGAGTCAAAACATGTGTTGAAAGAAACAAGAAATGTAGATAGTACAGATCAAAATGATACAGAAGATGGAGAAAAAGTATTTTATATTCCGTTACAACCTGGAAAGCAATTATCAGCTCAAGCGATTCAAGGAGTAGCTGTTAAATTAGGAACTAAGAATACTTCAAGTCAAAATCAGCAAGTTGTCATGAGTGCTAAGCTGGCAACTCATACACCAGTGGGTGCACAAAAATTAAGAGAGAAACCACTAGCAACTTCAACGCCCATGGATCCTCCTTCAACCACAATACAAAAGTCAAAACTTTCAGATAATTTAAAATCATCTTACAAAAACAGTATTAATCTTAAAATGCAAGATCGCATGTCTGAAAATTCTGAAGAGTTCAAATATAAAATACCCAGTTCTCCAAGTGCTAGTTCATCATCAAGTACCAAAATTTCAAAAAGAACCAACGTTAAACCTAGAATGCGTTCTGTCGAGTTTTGTAATCCTATTACGACTAGCGATTTTCCAATAGAACAAAAAACACCAATGTTGATTGAAGCTCCAGTGTTTCATCCAAACGAAAAAGAGTTTCAAGATCCTTTAGAGTATATTGAAAAAATTAGACCTTTTGCTGAAAAATTTGGAATATGCCGTATTGTACCACCCAATAATTTTAAACCGGATTGTAAAGTTGCAGATGATATGAGATTTACAGCCTATAATCAATATGTTCAGAAGATGTTGCATCGATGGGGACCCAATTTTAAAGAATTAATGGCTATTAGCAAATATTTAAAAACGCAAAATATTGCTTTAGTGCATCCACCTTGGATTGGTGGAATGGAAATAGATTTACCACGTTTGTACCAAATAGTTCAATCTCTTGGTGGCTTAAAAGAAGTAATTGAGAAGAAAAAATGGCCAAAAGTGTCCGAATTAATGAAAATACCTAAATCTGCTCAGGATAGGGTTACGAAACTTGATGATATTTATTGCAAATATCTTTTACCATATGACACTCTTTCACCAGCTGAAAGAGAAAAATTATTTGATGAAGTGGAAACTGATTGGGCGAAACGTGAATCTCGAGCTTTACTTAAATCTCAACAGAAAGTTACCACTCTTGATGCTAGTCTTGACAGTTCAGATTCAGAATCTGACGATGAATCTGAAGAATGTATAGTTAAAGGTAGAAATATGGCTTTGAATGCTTTCTATCGTATTGCTCGTAATACAATGAGTATGTGGTTTAAAACTATGGAACCTTCGGCACAAGAGGTAGAGCAAGAATTTTGGAAACATGTGACCACAAAACAAAACCACATATGTGTTCATTCGGGTTCTATTGATTGTGGAAATTGGGGTTACGGATTTGCTGTATCCAAGAATAGTCCGTTTGCTAGACACGCATGGAATCTTAAAGTGTTGACCAATAATAGTGGTTCCATTTTGAGATCTCTAGGACCTGTTATGGGTGTGACAGTTCCCACTCTTCATGTTGGTATGGTATTTAGTGCCTGTTGTTGGTACAGAGATCCTCACAGCTTACCCTGGATTGAATACCTTCACACCGGAGGTAATAAAATTTGGTATGGAATACCAAACTCCATGAGTAAAATATTTCACAAAGCTTTAATAAAATTAGTACCAAATTATTGTCGTAATAAGGCATTATGGCTACCATCAGATACAGCCATGGTACCACCTAGTCGTTTGGTAGAAAATGGAGTTTCCTTGTGTCGAACTATTCAGGAACCGGGACAGTTTATAGTAGTTTTTCCCAAAGTTTTTACATCGAGCATTTGTACAGGATATGTTGTATCAGAAAGTGTTTACTTTGCACCACCTTATTGGCTAAGTGCTGCTCAAAGTATATTCGATGACCTTCAAGAGAGTTGCGAGCCTTCCATGTTTTCATTTGAAAAACTTGTAGTCAAAGTTGCATCGGATGTGCGTTCAAATGTAGAAGTTTTAAGACTCATAATACCAATTATACAGTTAATGCACGAAAAGGAAAAATTAGCATGGCGGAAATTACAAAAATTAAATTTAGTAAATCAACAAAGAATACCGTTACCTGAAATACCTGTGAAGAAAAAAAAGAAATTGCAAAACGACAGTGGAGATTATGAATGCGAAGTATGTAGTAAAAATTTATATATTTCGTGGGTGACGGAATCAGAAGATTTAATCTATTGTTTAGAACATGCAATAGAATATATTGAGAGTAAAAAACTGGAAGTAGAGAATTGTACCTTGACCTATATGTACAATAACGAAGAATTGATTAATTTAATTGTAAAAGCTAAAACTGCTATTGAAACTAAATTGCAAAAGAAAGTTACAGGTAAAGTTGTGCTGACTTCTTAA
Protein Sequence
MVINRRDMKRRHKGDNNTCSLLDESPKRTKVHAQRKFAQGSNVSSPMITPVKDIEKQDKSKSDVFSEPQDLLPVNRPHTEDFLTFLCFRGTSMLPPTLNFFNVAPADTRTHSKATEEDPNDSCPPIANINLKSVTGANERPFIAFGVRKRADPVLVSKHMDKKRRHALALQALRRKYQEQKMAKIRAVTISKLSEKVSSKNNLVRTRSVTKTETAVKKHIPAKTKVKIVSTKHVKLATRSSINSTLRQAIKNPIRRHIPKKKMCLRSYRGKFIQHELQLKKSKKPKIANRKQNKESSSDFSSDDDQPLLNTVKVKSSKMAVSKKHKKSVVNLKKPAELNYRITRASSLFAPKLDQTVKRKIQISRSSIITKSPFVKLTPPKNIPSTVTGENSKLNNVKSDKSIEEPKPTEKKSERDLRNLKRSDTNIDKNAKKTDSHDNDVKKKSNKLDSSEKLNKKPLVVEKLLTKSPVIEVIKKLEFPSENIKKSNNLQLDPDSTENPSEKRTKRKVEVETINNEKNLKAKCDKLIENKEGKSDKSEPSQEKTTTVASEKKLKRKIEVPQEKDVKTKSKAELPSPEEPKVSQRPTRKTKEAAAIYMEILGHKLVHDGEIDDDDTSIDSFPELPNVRKTEQREIEMKATVKSKTDYKHKESPIVVEKEKRIAKSEDKSTIIDHKQSTENKPILKQPIKKDLDKKSNSNVTSNKDVIAELAKNTEMCKPEDKSIKNEIEKRTTRGSLHNKLTVLEGSSDSENDSIKITVKKDIKQTKNTKTTKENPELNTTKENPEPNPVKENPEAKTPTENPEPKTTKEHSKPKTIKENLEPKTKEHLELKPSKENPESKTTVSKNNSDNQKEKPVESTKTEKVNDSESEKSIISQEKTNKIVKRVKKLDKTPEKKLDNSFSDSDEEPLSKLAQTINKSNDKKSKNKRKSEEISDKEIKVNKNVKQMKKDNSEKIKQEEPILVVSGKPKRECTKRPQNYLPLFSSSEDEEQYFYGFVKTENVKSNKTTKMQNKCHATPTADLLCKDVDKRFGKGKVNMSTEQIEKWLNDSAMAGNAIKKEDDELMKFIEKNLLDKLDEDILKEPATSANMIDKCSVIEHRKESQVSEIMNSATNLQLKLIDRKTIFSKERKSALPSVNAFSANNESSVYAFEADTEDTVKTPFRRPTRRPSSTTTTRSEDSSKCENPKSLKKICTSSAVKPSTSKDTNKQEVSLTLSTDESHNSNSIAIHLDSESKHVLKETRNVDSTDQNDTEDGEKVFYIPLQPGKQLSAQAIQGVAVKLGTKNTSSQNQQVVMSAKLATHTPVGAQKLREKPLATSTPMDPPSTTIQKSKLSDNLKSSYKNSINLKMQDRMSENSEEFKYKIPSSPSASSSSSTKISKRTNVKPRMRSVEFCNPITTSDFPIEQKTPMLIEAPVFHPNEKEFQDPLEYIEKIRPFAEKFGICRIVPPNNFKPDCKVADDMRFTAYNQYVQKMLHRWGPNFKELMAISKYLKTQNIALVHPPWIGGMEIDLPRLYQIVQSLGGLKEVIEKKKWPKVSELMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPAEREKLFDEVETDWAKRESRALLKSQQKVTTLDASLDSSDSESDDESEECIVKGRNMALNAFYRIARNTMSMWFKTMEPSAQEVEQEFWKHVTTKQNHICVHSGSIDCGNWGYGFAVSKNSPFARHAWNLKVLTNNSGSILRSLGPVMGVTVPTLHVGMVFSACCWYRDPHSLPWIEYLHTGGNKIWYGIPNSMSKIFHKALIKLVPNYCRNKALWLPSDTAMVPPSRLVENGVSLCRTIQEPGQFIVVFPKVFTSSICTGYVVSESVYFAPPYWLSAAQSIFDDLQESCEPSMFSFEKLVVKVASDVRSNVEVLRLIIPIIQLMHEKEKLAWRKLQKLNLVNQQRIPLPEIPVKKKKKLQNDSGDYECEVCSKNLYISWVTESEDLIYCLEHAIEYIESKKLEVENCTLTYMYNNEELINLIVKAKTAIETKLQKKVTGKVVLTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2