Basic Information

Insect: Cantharis nigra
Gene Symbol: znf711
Assembly: GCA_958510845.1
Location: OY294029.1:51012858-51014357[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0035 0.18 13.1 0.2 1 23 83 105 83 105 0.98

2 12 1.5 79 4.8 0.1 2 22 134 154 133 154 0.93

3 12 0.13 6.7 8.2 0.3 1 23 180 202 180 202 0.97

4 12 3.2e-05 0.0017 19.6 3.1 1 23 214 236 214 236 0.99

5 12 3.3e-05 0.0017 19.5 2.0 1 23 242 264 242 264 0.97

6 12 2.4e-05 0.0013 19.9 0.5 1 23 270 292 270 292 0.97

7 12 0.1 5.5 8.5 1.6 2 23 325 346 324 346 0.97

8 12 2e-06 0.0001 23.3 0.8 1 23 357 379 357 379 0.99

9 12 0.0042 0.22 12.9 1.5 1 23 385 407 385 407 0.96

10 12 0.0027 0.14 13.5 3.3 1 23 413 435 413 435 0.98

11 12 0.0013 0.068 14.5 3.4 1 23 441 463 441 463 0.98

12 12 0.027 1.4 10.4 3.4 1 23 469 492 469 492 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0035	0.18	13.1	0.2	1	23	83	105	83	105	0.98
2	12	1.5	79	4.8	0.1	2	22	134	154	133	154	0.93
3	12	0.13	6.7	8.2	0.3	1	23	180	202	180	202	0.97
4	12	3.2e-05	0.0017	19.6	3.1	1	23	214	236	214	236	0.99
5	12	3.3e-05	0.0017	19.5	2.0	1	23	242	264	242	264	0.97
6	12	2.4e-05	0.0013	19.9	0.5	1	23	270	292	270	292	0.97
7	12	0.1	5.5	8.5	1.6	2	23	325	346	324	346	0.97
8	12	2e-06	0.0001	23.3	0.8	1	23	357	379	357	379	0.99
9	12	0.0042	0.22	12.9	1.5	1	23	385	407	385	407	0.96
10	12	0.0027	0.14	13.5	3.3	1	23	413	435	413	435	0.98
11	12	0.0013	0.068	14.5	3.4	1	23	441	463	441	463	0.98
12	12	0.027	1.4	10.4	3.4	1	23	469	492	469	492	0.97

Sequence Information

Coding Sequence: aTGGATATGAATAAGGTGGTATGTTCGGAAGAAGTGGAGAGCGAGAACAAATCGATTAAAACGGAAGAGCTGAAAGGCAATTCCGTTCAAGACCATgtggaatttttgaaagaattggaaattaaaattgaagaagtGGAAGACATGGATATCAAGCTGGAAGAACTGCATCATGTTATCGAAATTAAAGAAGAGACCGCTACGGTGCAATTTCCACTTCCGATATCACCAATAgtgaatagaatttttaaatgtcgGGTATGTAACGTAATATTTATGAATAAAGCGCAACTGGACGAGCATGCAAAAGTTCACTTCGGACAAAAACAATTAACATCGTGTAAATTGGATCggagtaaattttttgttacggAAACATCGAATTCCCGTCTAATGCTTGTCTGCAGAATGTGCGAGTATAAAACTAGTGACATGGGAAGTATAGAACAGCATTTAAGGAGTTCTTGTGATAAGAAGCCGTCTAGGTGCGAAATTTACCATAATGTTAACGAACGAAGTCATACCGTTGAGAAACCTTTTAACTGTAATGCTTGCGATTTTAAATGCTCCGTAGGTGAAGCGTTGATAGACCATCTACGGATTCATACCGGGGGAAAAAAACAACGTCCCGAGAAACAGTATGAAtgtaatatttgcaattttaaatgttcGCGTAAACAAGAGCTGAAAATTCATTTACGAATTCACAATGGCGAAAAACCATATCAGTGTTCAATTTGCGATATTAAATTCTGCCAAGAATCTACCTTGCGAAATCATGTATCACTTCACGTAAGCGAAAAATCATTTGATTGTACGATTTGTGACTTGAAGTATATACGTAAAGTAAGCCTAAAACAGCATATGCTAATCCACAAGAAAACATTTATGTGTGAACTCTGTGGTTTTAAATGTTTGAGGAAGGCCATCCTGACGGCTCATTTACGATGTCATAGCGGCGAGAAACCAATTGAGTGTAAAACTTGTGACTTTAGATGTTcctcaaataaaatattgattgaacATTTACTCACTCACATCGGGGAGAAGCCAAGTATGAAAAAACcgtttaaatgtaatatttgcaATTCAGGTTTTTCGAGCAGAAGTGCTTTGAAAAATCACTTGCGAATTCACACAGGCGAGAAACCATTCCAGTGtatattttgcgattttaaaacTTCACAGAATGGGACTTTGAGagtacatttacgaactcataccggtgagaaaccgttcgaatgtaaattttgtgaatACAGATGTGCTGTGCCGCATGCTTTGAGAAAACATCTGTTAACCCACACCGGCGAGAAGCCATTTCAATGCGAATTTTGTAGCTATAAATGTTCACTCAAGGCCAATTTGAATGTTCATTTGCGAaatcataccggggaaaaaccgtacaAGTGCAAAATTTGTAGCTTTGAATGTTCCTTAAACCGATCTTTGAAGGTGCATGTTTTGCGAAAGCATTCCAacaataaagttttattgtga
Protein Sequence: MDMNKVVCSEEVESENKSIKTEELKGNSVQDHVEFLKELEIKIEEVEDMDIKLEELHHVIEIKEETATVQFPLPISPIVNRIFKCRVCNVIFMNKAQLDEHAKVHFGQKQLTSCKLDRSKFFVTETSNSRLMLVCRMCEYKTSDMGSIEQHLRSSCDKKPSRCEIYHNVNERSHTVEKPFNCNACDFKCSVGEALIDHLRIHTGGKKQRPEKQYECNICNFKCSRKQELKIHLRIHNGEKPYQCSICDIKFCQESTLRNHVSLHVSEKSFDCTICDLKYIRKVSLKQHMLIHKKTFMCELCGFKCLRKAILTAHLRCHSGEKPIECKTCDFRCSSNKILIEHLLTHIGEKPSMKKPFKCNICNSGFSSRSALKNHLRIHTGEKPFQCIFCDFKTSQNGTLRVHLRTHTGEKPFECKFCEYRCAVPHALRKHLLTHTGEKPFQCEFCSYKCSLKANLNVHLRNHTGEKPYKCKICSFECSLNRSLKVHVLRKHSNNKVLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -