Cnig013487.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cantharis nigra
Gene Symbol
X-element\ORF2
Assembly
GCA_958510845.1
Location
OY294029.1:50374841-50388467[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0016 0.085 14.2 2.5 1 23 76 98 76 98 0.98
2 22 9.8e-08 5.1e-06 27.5 1.6 1 23 104 126 104 126 0.99
3 22 0.00018 0.0092 17.2 2.2 1 23 132 154 132 154 0.99
4 22 0.00016 0.0085 17.3 2.4 1 23 160 182 160 182 0.99
5 22 0.00027 0.014 16.6 1.4 1 23 188 210 188 210 0.98
6 22 7.1e-05 0.0037 18.5 0.9 1 23 216 238 216 238 0.99
7 22 0.18 9.6 7.7 2.5 1 23 244 266 244 266 0.99
8 22 0.00017 0.0086 17.3 1.2 1 23 272 294 272 294 0.99
9 22 9e-06 0.00047 21.3 2.6 1 23 300 322 300 322 0.99
10 22 0.003 0.16 13.3 1.4 1 23 328 350 328 350 0.97
11 22 0.00012 0.0065 17.7 6.8 1 23 356 378 356 378 0.98
12 22 0.00045 0.024 15.9 4.1 1 23 384 406 384 406 0.97
13 22 0.015 0.78 11.1 0.8 1 23 412 434 412 434 0.97
14 22 0.00028 0.015 16.6 3.0 1 23 440 462 440 462 0.99
15 22 0.0042 0.22 12.9 4.9 2 23 469 492 468 492 0.90
16 22 0.99 52 5.4 3.8 2 23 544 565 543 565 0.97
17 22 0.011 0.59 11.5 0.4 1 23 571 593 571 593 0.98
18 22 4.4e-05 0.0023 19.1 0.8 1 23 599 621 599 621 0.98
19 22 1.4e-05 0.00072 20.7 0.2 1 23 627 649 627 649 0.98
20 22 0.00068 0.036 15.4 3.0 1 23 655 677 655 677 0.99
21 22 0.00034 0.018 16.3 0.4 1 23 683 705 683 705 0.99
22 22 0.00084 0.044 15.1 4.9 1 23 711 733 711 733 0.99

Sequence Information

Coding Sequence
ATGAAATACTTAATGATGGTATGTTTGTTGCAGGACTCTCCATGCCATTCGAAATGCCACTCCAAAAATAAGACAGAACAAATTGATATTCAGTTGGAAGATTTGCACCATTCGATAGATATTAAAGAAGAGAATTCAATTCTGGAATGCAAAGCAGAAGCAAAAGAAAAACCATTATTtgattataaagaaaatttaaaaattgaatcgGTCGATAATAAACCATTTACATGTGTAATTTGTGGTTATAAATGTAAACAGAGAGGAACTTTGGTAATTCATTTTAGAACCCACagtggtgaaaaaccatttacctGTGAAATATGCGGTTATAAATTCACtcgtaaagaaaatttaaaaattcatttgagAACTCATAcaggtgaaaaaccatttaagtgTGAGATTTGCGATTTTAGATGTGGCGGTCAAAGCAACTTAAACAGTCATTTAAGGACTCATACGGGGGAACACCCGTTTACCTGTGAAATTTGCGGATGTAAATGTGCGCAGAGGGCATCGTTGGAAGTGCATTTAAGaactcacaccggcgagaaGCCATATATGTGTGATATATGTGAATACAGATGTGCGCAGAAAGGaagcttaaaaattcatttgAGATCTCATACGGGCGAGAAGGCGTTCACGTGCGGAATTTGTAATAATTCGTACGCAAATAAGGGATActtaaataaacatttgaaaACACACACAGGCGACGATTCGTTTAGATGccagttttgtaattttaaaagtccTGAAAAGATCAAATTAAAGCTTCATTTGAGAACTCATGCTGGTGAGAAATCATTCACTTGTGAAATATGTGGCTACAAGTGTAAGCAAAAAGGAGTTTTGGAGGTTCACGtgagaactcataccggcgagaaaccatttacgTGTCATCTATGCGGCTACGTATTTGTGAGTAAGCAGAGTTTGAAAATACACTTGAAGACTCATTCGGGTGAGAAACCATTCGCGTGTGAgctttgcgattataaatgtggAAGTAAGGGAAGTTTGAACAGTCACTTACAAACCCATGCGGGCGAAAAACCGTTCACGTGCCATATATGCGGCTACAGATGTGCAAAAagtgaacatttaaaaactCACATGAGGATTCacacgggggaaaaaccgttcgcATGTAAAATTTGTGGCCACAAATGCGCACAAAGAGGAACTCTGAAGAGGCATTTACAAACTCACACAGGCGAGAAGCCGTTTGCCTGTAATCTTTGCGACTATAAGTGTGCACGTAAAGCAGTTCTGAAAGTCCATTTGGGGACTCACACTGGCTATAAGCCATTTCagtgtgaaatttgtgattttaaatctGCACataaagaaaacttaaaatatcaTTTGAGAACTCATACTGGAGAGAAACCTTGTTCCTGCGAAATTTGTGGCCACAAGTCCACaacaaaagcaaatttaaaaagacaTATTGAGACTCCTTGTCATTCTAATACTGTCTTCCAACCGAAGgcagaaaaagaagaaattgatTTCATGTTGGAAGAATTGCATCATTCGattgatattaaagaagatACGCCAATCGAAGAACCTGAACCGAAGAAAGAGAGCAAATTGAACAAAAGAAGTAAACGGATTAGTTGCGATATTTGCAACTATAAATGTACATGCAAAGCTGTgttgaaaattcatttaagaactcacacgggtgaaaaaccatttatttGTCAGGTATGTGATTTTAAAAGTGCACGTAAAGATTATTTACCAATTCATATGAGAACacatacgggggaaaaaccaTTCGAGTGCAAAATTTGTGAATATAAATCTACTACTAGCAGCGATCTAAAAATGCATATTAGAGTTCACACCGGCGAGAAGCCTTTCAtgtgtgaaatttgtgatttgAAATTTGCCTTGAAGGGTAATTTAAATCAGCATATGAGAATTCACACCGGTGAGAAACCATATAAGTGTGAAATTTGCGGCTACAAATGTGCACGTACACAAAGGCTGAAGATTCACTTGAGAACTCACactggcgaaaaaccgtatACGTGTAAAATATGCGACTATAAATCCGCAAATTCCGGAGATGTAAAAGTTCActtaagaactcatactggcgaaaagCCATTCACTTGTAAATTCTGTGGTCATAAATGTACAACAAGTGCAGCTTTAAAAATTCATGTTAGAACACATACTGGCGAGAAGCCATTTATTTGTAAGATTTGTAACTACGAATGTGCACaTACGTCGCTGGAAATTTCTCCTGCGGCAATAACTAAACAAAATCCCCTTATTAAGGGGAACTCACGAACTTTCTTAAAGAGAAACTTAAGCAAAGGCCCTCGTGGTCATTCAGAAAAAACCGCAAGACTTAACAAAGCCATCAACGAGATGGCCAGTTCATTGGAATACCAAGACTCATTGAAGGAAGCCGATCTATTAATGGATTTTGCACAGATGCCCTTCGAAAAGCAAACCTCCAAGAGGAACAGGGAAGGAAACACCCCTCCAAGAAGGATCAGAAAACCAGAGAATTTTATCGTGCCCATCAGAAATCGTTTTGATGCTTTCCGAAGGGAAGTCGTAGACACGACACCAAAGCAAACGACACCAGAACCACCAGTACCGCAACCAAAAAAGATAAGGCCTACCCCTATCATCTTGAAGCGTGGACTCATCGGGACCCAGGACTACAAGGACACCATTGACGACATCAAAttggtaacaaataataataatttttctatcaaaaatttaggaaaccaGACTAAAATTATCGTGGAGACGATGGAGGACTATAACCGAATGATAGATGATTTAAACGACAAGAAGGTCGAATACTACTCGTTTGGAACAGCAAACACCAAACGCAGCTCGTTCGTAGTGAAGGGTACCAACGAGATCGATCCCAAAGAGATTATGGAAGACCTGAAGAGTAAAGGTCTAAAGCCAGAAGCATGCAGACTGCTTGCCAACAAGACCAAGAACAACGCACCTATTCTGTACCCGAAATACAGAATATCTTTCGCAAACGGAACGACACTGCAAGATGTACGGAAAGTGCGACACTTGGTACACAGCACGTGCTACTGGGAGAAATACAGACCCCCAAGAAATATAATGCAGTGCGGAAACTGCTTGGATTTTGGCCATGGTAGTAGATACTGCCATGCGCATGCAGTCTGCGGTCACTGCACCAAGCGACACAACACCTGGGACTGCAAGGAACAGGAAAAGGAACCGAAGTGTGGAAATTGCAATGGTAACCATCGAGGAACTTCCATTGAATGCCCAAAATATCAGGCAGCCGAAGAGAAAGCCAACGCCAAAAAGGCGCAACAGAGCCGAAAGCATTGGAAACAAAACCCAACAAGGATAGACTACTCGTACAATCCCGGAGAGTACCCCGATTTACCAAGAAGACCATTAATGGATATTCACGTGGAACCCCCACGCACGACACCACCTACACAGCAAACAAGTCATCCTTGGCCCAAATTAGGACCCAGAAAACAACAGCCACCAAGTGAGACACAAAGAAACGCTCCAGCCGCAAACTCCGCATTCGAGGCATTCATGAAGGAGATGGATGATATCAACAAAATGTTTGACTTTAAAAAGCTTACCGAAATGCTAAGGAAGCTTAAACATCAACTAGCCAATGCTACAAATGCAATGGATGTGCTGTCGGCCTGCAACGAGGCAAATGAGGCTTTTGCTGCCATCAGAAAAATCCATGGTATGGTCAACAAAAAGGAAGAACTGGAGGATTTCCTTTTATCGAATAGCATAGACGTCGCACTGATCAGTGAAACCTGGCTAAAGCCAGATGTCAAATTCAAACTCAAGAAATTCCACATCTACAGATTGGACAGGATAGCACACGGTGGAGGAGTtgcaattattatcaaaaaaggcATTCCTCACGAACCAGCAAAACccgaaatttctcaaaatttagaaatcatCGTTTACAAGATCAAGACCAGCCCGCCACTCCACGTTGGTGCAGCCTACAATCCACCCCAGTTACACGAATACCTTGCGGAAGAGCTGAACGTGTTCCTGAGACAGTATCCCAACATCGTCATTGGAGGAGACTTCAATGCAAAACACTCGTCTTGGAATTGCAGTACTAACAACAGTTCTGGCAATATCCTGCGAGACTTATCACTAGAAAAGAATTTCGTCATAGTATACCCGCCTGAACACACATATCGTCAAGGGCCGCGTTATCAACCATCCACACTTGACATCTTCCTCCTCCAGGGTGTCGGAGAACACACCACACCAACGGTCCTGGAAGACCTTTCTTCAAATCACTACCCAGTGGTGATGACCCTCTTTCTCAACTGCGACTTGCATGAAAGAGACATTCGTACGACCAACTGGCAAACATACAAGCAACTCTGCAACGAGCGAATGGCAATCGACACCAACCTCGTCACCAATGCAGATATCGACAAAGCTATCAAAAAGTTCACAGAGGTACTTCAATCTGCTTACAACGATGCAACCacaaagaagaaaatgaaaaaaacctACAAAGTGGATCCAGAAATCAAGAGACTGAAAACGATCCGAAACTGGGAAAAGAAGCAGTGGCTTCGCACAGGAGATCCGGCACACCGCATCGCCAAGAATCACATCACCGAAGAGATTCAGCAGTTGCTTcgagaagaaagaaaagaaaactggAGAAAAGTGACAGAAGGCCTAGCGCTCCGGGACAACTCACTTTGGCAGGTCTATAAACGTTTAAAGAACAAACATGACGAGATTCCGATAATCAAGACCAGCAACAACGTCAACTTATATACCGATAAAGAAAAAGCCGACGCTTTCGCAAATGTTTTTCTGGATGCCCACAGCAAAACTATCAACGACGTCTCTCCCATGGACGAAGAAGTGAACGCCACCTACGAGAACCTTCACCTGAATCTGGATATTCTCGACGAAAGTCCCCTCGAGACGAATCCGGCTAAAATTGCTAAAATCATtcgaaaactgaaaaacaaaaaagctcCCGGGCTGGATGGCATCTCGAATAGACAGCTCAAATACCTTCCCAGGAAAGGAGTTTGCCTCCTATACTACATTTTTCGTGCATGCCTGTCGAACTGCTACTTTCCCACTCAGTGGAAGCTGGCCAAGGTGATTGCGCTGCCAAAACCCAACAAAGCAAGAAACGTCGCCACAAACTACAGGCCCATTAGTCTGCTTGCTACTCTCAGTAAAGTTTTAGAGAAAATCATACTGGAGGAGCTCAAGAACCATCTAACCGAACACGGAATTATCATCAATGAACAATTCGGTTTCAGAGCCGGGCATAGCACAACCCATCAAGTAGCACGCATCAAGGAGAAGATCGTGCACAAAAGACACATAAACAAAGACACGGGCATGGTGTTATTGGATTTGGAAAAAGCTTTCGACGTCGTTAATCGCAAAGCACTTATTTATAAGTTAGTCAAGTTAGTTAAGGCTCCTATCAAACTAATCAAAATCATTGTCAGCTACCTGGAGGGcagacaattttttgttatcgtCAACCAAGCCGTCTCCACTAAAATAGACGTTCCAGCTGGCGTTCCGCAAGGCTCATTATTGGGTCCGATCCTATTCTCCATTTTCATCAACGACATTCCTCGACACCACAAAACAAGTATTGGAGTTTATGCAGACGACACAGCCATTTTCGCCCATTCCAAGGAAACCAGGAAATACGTAACGCACCTAGAAGAACACATTGAACAAATTCTCGAATTTTTCAAGACGTGGAAACTTAAAGTCAATATACCCAAGACGGAAGCAATCCGGTTCACCTTCAAACGCAAACCTCCCGACATCGCAGGAGTCAAAGTCGGAGATAACACCATCCCATGGCAGAATACAGTGAAATACCTGGGCACCACACTGGATTCGAAGCTGCTATTCAACCAAGAAATTCAGGCTCGACTGGACAAATGCAACTTTGTTATCCAATTACTATATCCCTTCATTGGTCCAAATGCTAAAACACCGAAGAGAGAAAAAGTCACTTTGTACAAAGCTTGTGCAAGGTCGATACTTACCTACAACGCTCCCATCTGGGCCACCGCATGCAAGACGAAGATGAAGTCCATCCAAGCTATGCAAAATAAATTCCTGCGGATTATCGGCCAATATCCCAGGTTTACCACCATCGACTTCATGCACGCAGACCTGGAGATCGAAACCATCGACACGTTCATCAAAGAGAAGACCAGGAAGATCATCAAACAAATGACGACTCACCAGAATCCACTTATATCCGAAGTGATTTCATACGACGACGACGAGCTTTTCGGAAGCGTGAAGAGATccatgaaacaaattttaaattaa
Protein Sequence
MKYLMMVCLLQDSPCHSKCHSKNKTEQIDIQLEDLHHSIDIKEENSILECKAEAKEKPLFDYKENLKIESVDNKPFTCVICGYKCKQRGTLVIHFRTHSGEKPFTCEICGYKFTRKENLKIHLRTHTGEKPFKCEICDFRCGGQSNLNSHLRTHTGEHPFTCEICGCKCAQRASLEVHLRTHTGEKPYMCDICEYRCAQKGSLKIHLRSHTGEKAFTCGICNNSYANKGYLNKHLKTHTGDDSFRCQFCNFKSPEKIKLKLHLRTHAGEKSFTCEICGYKCKQKGVLEVHVRTHTGEKPFTCHLCGYVFVSKQSLKIHLKTHSGEKPFACELCDYKCGSKGSLNSHLQTHAGEKPFTCHICGYRCAKSEHLKTHMRIHTGEKPFACKICGHKCAQRGTLKRHLQTHTGEKPFACNLCDYKCARKAVLKVHLGTHTGYKPFQCEICDFKSAHKENLKYHLRTHTGEKPCSCEICGHKSTTKANLKRHIETPCHSNTVFQPKAEKEEIDFMLEELHHSIDIKEDTPIEEPEPKKESKLNKRSKRISCDICNYKCTCKAVLKIHLRTHTGEKPFICQVCDFKSARKDYLPIHMRTHTGEKPFECKICEYKSTTSSDLKMHIRVHTGEKPFMCEICDLKFALKGNLNQHMRIHTGEKPYKCEICGYKCARTQRLKIHLRTHTGEKPYTCKICDYKSANSGDVKVHLRTHTGEKPFTCKFCGHKCTTSAALKIHVRTHTGEKPFICKICNYECAHTSLEISPAAITKQNPLIKGNSRTFLKRNLSKGPRGHSEKTARLNKAINEMASSLEYQDSLKEADLLMDFAQMPFEKQTSKRNREGNTPPRRIRKPENFIVPIRNRFDAFRREVVDTTPKQTTPEPPVPQPKKIRPTPIILKRGLIGTQDYKDTIDDIKLVTNNNNFSIKNLGNQTKIIVETMEDYNRMIDDLNDKKVEYYSFGTANTKRSSFVVKGTNEIDPKEIMEDLKSKGLKPEACRLLANKTKNNAPILYPKYRISFANGTTLQDVRKVRHLVHSTCYWEKYRPPRNIMQCGNCLDFGHGSRYCHAHAVCGHCTKRHNTWDCKEQEKEPKCGNCNGNHRGTSIECPKYQAAEEKANAKKAQQSRKHWKQNPTRIDYSYNPGEYPDLPRRPLMDIHVEPPRTTPPTQQTSHPWPKLGPRKQQPPSETQRNAPAANSAFEAFMKEMDDINKMFDFKKLTEMLRKLKHQLANATNAMDVLSACNEANEAFAAIRKIHGMVNKKEELEDFLLSNSIDVALISETWLKPDVKFKLKKFHIYRLDRIAHGGGVAIIIKKGIPHEPAKPEISQNLEIIVYKIKTSPPLHVGAAYNPPQLHEYLAEELNVFLRQYPNIVIGGDFNAKHSSWNCSTNNSSGNILRDLSLEKNFVIVYPPEHTYRQGPRYQPSTLDIFLLQGVGEHTTPTVLEDLSSNHYPVVMTLFLNCDLHERDIRTTNWQTYKQLCNERMAIDTNLVTNADIDKAIKKFTEVLQSAYNDATTKKKMKKTYKVDPEIKRLKTIRNWEKKQWLRTGDPAHRIAKNHITEEIQQLLREERKENWRKVTEGLALRDNSLWQVYKRLKNKHDEIPIIKTSNNVNLYTDKEKADAFANVFLDAHSKTINDVSPMDEEVNATYENLHLNLDILDESPLETNPAKIAKIIRKLKNKKAPGLDGISNRQLKYLPRKGVCLLYYIFRACLSNCYFPTQWKLAKVIALPKPNKARNVATNYRPISLLATLSKVLEKIILEELKNHLTEHGIIINEQFGFRAGHSTTHQVARIKEKIVHKRHINKDTGMVLLDLEKAFDVVNRKALIYKLVKLVKAPIKLIKIIVSYLEGRQFFVIVNQAVSTKIDVPAGVPQGSLLGPILFSIFINDIPRHHKTSIGVYADDTAIFAHSKETRKYVTHLEEHIEQILEFFKTWKLKVNIPKTEAIRFTFKRKPPDIAGVKVGDNTIPWQNTVKYLGTTLDSKLLFNQEIQARLDKCNFVIQLLYPFIGPNAKTPKREKVTLYKACARSILTYNAPIWATACKTKMKSIQAMQNKFLRIIGQYPRFTTIDFMHADLEIETIDTFIKEKTRKIIKQMTTHQNPLISEVISYDDDELFGSVKRSMKQILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-