Basic Information

Insect: Cantharis nigra
Gene Symbol: -
Assembly: GCA_958510845.1
Location: OY294029.1:45100300-45105335[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0026 0.14 13.5 1.4 1 23 61 83 61 83 0.98

2 26 5.1e-05 0.0026 18.9 5.7 1 23 89 111 89 111 0.99

3 26 0.00029 0.015 16.6 0.1 1 23 117 139 117 139 0.98

4 26 1.2e-06 6.2e-05 24.1 0.7 1 23 145 167 145 167 0.99

5 26 0.00045 0.024 15.9 1.9 1 23 173 195 173 195 0.98

6 26 6.7e-07 3.5e-05 24.8 1.0 1 23 201 223 201 223 0.98

7 26 0.00092 0.048 15.0 0.5 3 23 231 251 229 251 0.98

8 26 0.00032 0.017 16.4 2.7 1 23 275 297 275 297 0.98

9 26 0.00093 0.048 14.9 0.7 1 23 303 325 303 325 0.98

10 26 0.0017 0.089 14.1 1.1 1 23 331 353 331 353 0.98

11 26 0.0037 0.19 13.1 1.2 3 23 361 381 360 381 0.99

12 26 0.016 0.84 11.0 0.7 3 23 743 763 741 763 0.98

13 26 0.05 2.6 9.5 2.3 1 23 769 791 769 791 0.97

14 26 3e-05 0.0016 19.6 4.8 1 23 797 820 797 820 0.96

15 26 2.1e-05 0.0011 20.1 1.4 1 23 830 852 830 852 0.97

16 26 0.00072 0.037 15.3 0.7 1 23 858 880 858 880 0.97

17 26 0.0039 0.21 13.0 1.3 1 23 886 908 886 908 0.95

18 26 1.7e-05 0.00087 20.4 3.1 1 23 914 936 914 936 0.99

19 26 7.9e-06 0.00041 21.5 1.0 1 23 942 965 942 965 0.97

20 26 0.00071 0.037 15.3 1.6 1 23 975 997 975 997 0.97

21 26 0.00026 0.014 16.7 3.2 1 23 1003 1025 1003 1025 0.98

22 26 2.3e-05 0.0012 20.0 0.9 1 23 1031 1054 1031 1054 0.96

23 26 0.00021 0.011 17.0 3.6 1 23 1064 1086 1064 1086 0.97

24 26 0.00026 0.014 16.7 3.2 1 23 1092 1114 1092 1114 0.98

25 26 0.0027 0.14 13.5 1.9 1 23 1120 1142 1120 1142 0.96

26 26 0.0011 0.056 14.7 1.7 1 23 1148 1170 1148 1170 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0026	0.14	13.5	1.4	1	23	61	83	61	83	0.98
2	26	5.1e-05	0.0026	18.9	5.7	1	23	89	111	89	111	0.99
3	26	0.00029	0.015	16.6	0.1	1	23	117	139	117	139	0.98
4	26	1.2e-06	6.2e-05	24.1	0.7	1	23	145	167	145	167	0.99
5	26	0.00045	0.024	15.9	1.9	1	23	173	195	173	195	0.98
6	26	6.7e-07	3.5e-05	24.8	1.0	1	23	201	223	201	223	0.98
7	26	0.00092	0.048	15.0	0.5	3	23	231	251	229	251	0.98
8	26	0.00032	0.017	16.4	2.7	1	23	275	297	275	297	0.98
9	26	0.00093	0.048	14.9	0.7	1	23	303	325	303	325	0.98
10	26	0.0017	0.089	14.1	1.1	1	23	331	353	331	353	0.98
11	26	0.0037	0.19	13.1	1.2	3	23	361	381	360	381	0.99
12	26	0.016	0.84	11.0	0.7	3	23	743	763	741	763	0.98
13	26	0.05	2.6	9.5	2.3	1	23	769	791	769	791	0.97
14	26	3e-05	0.0016	19.6	4.8	1	23	797	820	797	820	0.96
15	26	2.1e-05	0.0011	20.1	1.4	1	23	830	852	830	852	0.97
16	26	0.00072	0.037	15.3	0.7	1	23	858	880	858	880	0.97
17	26	0.0039	0.21	13.0	1.3	1	23	886	908	886	908	0.95
18	26	1.7e-05	0.00087	20.4	3.1	1	23	914	936	914	936	0.99
19	26	7.9e-06	0.00041	21.5	1.0	1	23	942	965	942	965	0.97
20	26	0.00071	0.037	15.3	1.6	1	23	975	997	975	997	0.97
21	26	0.00026	0.014	16.7	3.2	1	23	1003	1025	1003	1025	0.98
22	26	2.3e-05	0.0012	20.0	0.9	1	23	1031	1054	1031	1054	0.96
23	26	0.00021	0.011	17.0	3.6	1	23	1064	1086	1064	1086	0.97
24	26	0.00026	0.014	16.7	3.2	1	23	1092	1114	1092	1114	0.98
25	26	0.0027	0.14	13.5	1.9	1	23	1120	1142	1120	1142	0.96
26	26	0.0011	0.056	14.7	1.7	1	23	1148	1170	1148	1170	0.98

Sequence Information

Coding Sequence: ATGAATTTGGGATCATCGGAAGAATTTTTGTGCAAACCATGCAACGAAGTTAAAGCTGAGCCTATAGAAGCCATGGAAATTAAGCTGGAAGGATTACATCATACCATCGACATCAAAGAAGAAACTTCTATTAAAGCATTTCAAGTGGATCTGGCATACAAAACACATACCAGTAAACCATTTGTTTGTCAAATCTGTGACTATAAAAGTGTTCATAAGGGAAGTTGGAAAAATCATCTCAAAATTCATtccggtgagaaaccatttagGTGTCGAATATGCAAATATGGATTTTCAAAGAAGGAACATTTAAATAGGCATACAAGAACTCACACTGGAGAAAAGCCGTTTGAGTGTGAGATTTGTGGATATAGAAGTGCTCAAAAGGACACCTTGGTGATTCATTTAATGAGCCATTCCGGTAGGAAACCGTTCCGATGTGACGTTTGCGGATATGGATTTTCTAAGAGAGATGGATTAAATAAACATCTAAGGACGCACACTGGAGAGAAGCCCTTTACTTGTGCCATTTGCAATTTCAAATGTGCTCGAAAAGACTCCCTGATTAGTCATTTAATGACTCATAGtggtgagaaaccattttcTTGTGATATTTGTCAATATGGATTTTCAAGTAAATCAAATTTGAGTAGGCACCTAAGAGTCCACACCGGAGAGAAACCGTTTGGGTGCGAAATTTGCGATTATAGATGCGCTCAAAAGGGAGATTTGAAAATTCATGTCAAAGTTCATACGAAGACAGTCAAGATACGATCTACCTCTCCGTGTAGCTTTGTAAAAGTGCATACCGGAGAAAAACGGTTTGTTTGTGAGATTTGCGGATATAAATGTAGAAACAAAGCAACTATGAGGTATCATGTAAGAACTCACACTGGTGAGAAACCGTTTGAATGTGAATTTTGTGACTTGAAATTTATACTTCGgggaaagttgaaaattcatttaagaTCGCATACGGGTGAAAAACCGTATATATGTGATATTTGTGACTTTAAAAGTGCATCTAGTGACCGCTTGAAAAAACATACAAAAACtcataccggtgagaaaccGCATGGATGCCCAATTTGTGATCACAAATCGGCAGACCGGTATCGTTTGAAACTACACATGAGAAGTCATACTGGGGAGAAACCGTTTGCATGTGAAATTTGCAGCTTTGCTTATGCACaaataccTTTTTTACCGAGTATTTCGCAAATAAGAACAAATGGTACACTGGATggcattccataccccccagactttCCGCCGGTTACTAAACCGACTAGTTTAGAGAGGTCTGGGGTTATGGAATATCCTCCAGTACACAGATTACCCTTTATTCGTGCACCAATACTTTGGAGTTACTCAGTAGCCAATACTGAGGATATACCAATCTCCCAGATACCTCAGGTTCCGAAAGCTATCGAGAGAGTATTTGGAAGCAGCTTTTTTTGCAAAGCGTTGGGAGTGAAGAAATATTCTGGAAGACACCACCCAGATGGTATGGGTGATAGTGTCAGATTTTTACTGACTAAAACCCCACTGAACTGGTGTTATCCACTGCCATGTTGCATCTCTCTGTTAGCTGATCCTCCGTTTTCAGTTTTCACCATTGTCACCAGGCGGCATGGGCCAGTTTCAACTTCCAGCATCCGCCAATCATCGATCAGGTTTGCCATCGAAGGCGTTGCCAGGTTAGACGGGACGGAAGAGTTTTGGGAGAATAGCGGATGTAACGATAACAAAATTCCAACAGATGAAATGGAGAACATGGATATGGAATTAGAAAGTTTGCACCATTCTACAGATATTAATGAAGATCATCCGATCTTAGTATATCAACAGGATAGTAACGAGAAAACCATCGGTCATTCGAATAGTTACTTTCAAATTAAGACGGAACTGAAAGAAGAAATagaagatttgcatcattccatcgacatCAAAGAAGAAATCTTAACAAACGAATCTCGAGTGGGTCAAGATTGTACTACGAATGTACTGCCTTTTGAATATAAAGAAATCAAGCTAGAAGATTTGCACTCCGTTTATATTAAAGAAGAAACTTCGATAGATTGTAGAACACaagcaattaataaatttgaatgtgAGGTATGCCATGCATTATTTTCTAACGAATTACAACATAGAACCCATGCAGAAATTCATGCCGAGATAAATAAATCTACGAGTACGAATTCCGGAGTAAAACCGTTTTGGTGTGAATTTTGTGCCTATAAATCTGTTAGAAAATATGATTTGAATagacatttactaactcatactgGTGAAAAGCCCTTTGCCTGTGATCTTTGCGACTTTAAATGTTCTCTGAAAAGTACGATGAAAAATCATTTGCTCATTCATACAGGCACGAAATTGTTTGCATGTgaaatttgcgattttaaattttctcgaaaacaCCATTTGAAGAATCatattcaaaaaatacatttaaagaCTGATACTACTGGGAAACCGTTTGCATGTGAAATTTGCGATTGTAAATTTCCTCGAAAAGACACTTTGAAAATTCACCTGAtgactcatactggcgaaaGACCATTTGCCTGTGAAATCTGCAAATCAACTTTTTCCAAAAGAGACGTGTTAATTAAGCATCGGAGAATCCATACTGGTGAGAAACCGTTTGCCTGCGCAATTTGTGACTTCAAGTGTTCTCGAAAAGAATATTTGAAGATTCATGTAATGGACCATACTGGCCAGAAACCCTATACATGTGAAATCTGTAAATGCAGTTTTTCTAAAAGAGACGGATTAACTAAGCATCTAAGAATCCATACCGGTGAGAAACCGTTTGTCTGTGGAATTTGTGACTTTAAATTTTCTCGAAAAGAATATTTGAAGAACCatattcaaaaaatacatttaaagaCTCATACTACTAGGAAACTATTTGCATGTGAAATTTGTCATCGTAAGTTTCTTCGAaaagattctttgaaaattcacCTTATGATTCATACTGGCGAAAGACCATTTACTTGTGAAGTATGTAAATTGACTTTTTGCAAAAAAGACGTGTTAAACAAGCATCTAAGAATCCATACTGGTGAGAAACCGTTTGCCTGTGGAATTTGTGACTTTAAATTTTCTCGAAAAGAATATTTGAAGAGCCatattcaaaaaatacatttaaagaCTCATATTAATAGGAAACTATTTGCATGTGAAATTTGTCATTGTAAGTTTCCTCGAAGAGATACTTTGAAAATTCACCTGAtgactcatactggcgaaaGACCATTTACTTGTGAAGTATGTAAATTGACTTTTTGCAAAAAAGACGTGTTAAACAAGCATCTAAGAATCCATACTGGTGAGAAACCGTTTGCCTGTACAATTTGTGAGTTCAAGTGTTCTCGAAAAGAATATTTGAAGATTCATTTAATGGCCCATGCTGGCCAGAAACGCTTTACGTGTGAAATTTGTAAACGCGGTTATACCAAAAGAATCAGATTAAATAAGCATGTAAGAAGTCACGCCGGAGTGAAACCGTTTACATGTGAATAA
Protein Sequence: MNLGSSEEFLCKPCNEVKAEPIEAMEIKLEGLHHTIDIKEETSIKAFQVDLAYKTHTSKPFVCQICDYKSVHKGSWKNHLKIHSGEKPFRCRICKYGFSKKEHLNRHTRTHTGEKPFECEICGYRSAQKDTLVIHLMSHSGRKPFRCDVCGYGFSKRDGLNKHLRTHTGEKPFTCAICNFKCARKDSLISHLMTHSGEKPFSCDICQYGFSSKSNLSRHLRVHTGEKPFGCEICDYRCAQKGDLKIHVKVHTKTVKIRSTSPCSFVKVHTGEKRFVCEICGYKCRNKATMRYHVRTHTGEKPFECEFCDLKFILRGKLKIHLRSHTGEKPYICDICDFKSASSDRLKKHTKTHTGEKPHGCPICDHKSADRYRLKLHMRSHTGEKPFACEICSFAYAQIPFLPSISQIRTNGTLDGIPYPPDFPPVTKPTSLERSGVMEYPPVHRLPFIRAPILWSYSVANTEDIPISQIPQVPKAIERVFGSSFFCKALGVKKYSGRHHPDGMGDSVRFLLTKTPLNWCYPLPCCISLLADPPFSVFTIVTRRHGPVSTSSIRQSSIRFAIEGVARLDGTEEFWENSGCNDNKIPTDEMENMDMELESLHHSTDINEDHPILVYQQDSNEKTIGHSNSYFQIKTELKEEIEDLHHSIDIKEEILTNESRVGQDCTTNVLPFEYKEIKLEDLHSVYIKEETSIDCRTQAINKFECEVCHALFSNELQHRTHAEIHAEINKSTSTNSGVKPFWCEFCAYKSVRKYDLNRHLLTHTGEKPFACDLCDFKCSLKSTMKNHLLIHTGTKLFACEICDFKFSRKHHLKNHIQKIHLKTDTTGKPFACEICDCKFPRKDTLKIHLMTHTGERPFACEICKSTFSKRDVLIKHRRIHTGEKPFACAICDFKCSRKEYLKIHVMDHTGQKPYTCEICKCSFSKRDGLTKHLRIHTGEKPFVCGICDFKFSRKEYLKNHIQKIHLKTHTTRKLFACEICHRKFLRKDSLKIHLMIHTGERPFTCEVCKLTFCKKDVLNKHLRIHTGEKPFACGICDFKFSRKEYLKSHIQKIHLKTHINRKLFACEICHCKFPRRDTLKIHLMTHTGERPFTCEVCKLTFCKKDVLNKHLRIHTGEKPFACTICEFKCSRKEYLKIHLMAHAGQKRFTCEICKRGYTKRIRLNKHVRSHAGVKPFTCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -