Cnig017984.1
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- ncor1
- Assembly
- GCA_958510845.1
- Location
- OY294031.1:4571996-4584635[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-09 3.9e-06 27.7 0.0 3 43 439 479 438 481 0.97
Sequence Information
- Coding Sequence
- ATGCGGACAAGGACGCTGGTGAATAACACCGCGGCGTTGCCAAGTCGCTCGTCTAACAATAGAAAGAAGCAAGGTGCAACCGGTTTTAGCAACGTTGCAATGTCTCGGTGgccAAACCATAATCCTCAGACAGAATTGTACAAACCATCGAGATCACCTTTGGCCAATACAGCCCGTTATCCGTACCCCGTTTCGCCCCAGCAATTGCATAACCAAGTCAATCAGGTATCCAACCAGAGGTATAATGTTCCGTCGGCAGTATCATTCCCACAGGCAGGTTACAGGGAATATAGACAACCCAGAATTTCTCTCTTGCAAGAATACAACACACGGACGCGAGAACAAATTTCGGGTGGAGGCTCCCTCGTACACCACATTGAGCCGATACAAGGGCAAACACAACAGCCTTACAAGAAGATGCGATTGCAGGATCAAAAGGATATGCAACCATTGAGAATAGATACAAGGccGCCCTCCGGAGCTTACAATCCCCAAGTGGAAGCAATATCTCCAACTTTACCCGATCATGTGCAACAAGAAGAGCAAACTTACAAAACCACGAAAGACGATCTATTACAAAAAATCGGTAAGGTCGATCGGGAAATAGCAAAAGCCGAAGcccaaattgcaattttaagaCAAAAAGAAAGAGATTTGGAAGAGCTCGCGTTGAAACCTTTGGCTAATCCCCAAACGCCCGAAGACACCCAACCCAAACACCAAAGTTTAGCTCAAAAAATTTACGCCGAAAATAGAAAAAAGGCGCAGAACGCGCACTGTAAACTCGACATGCTGGGTTCCAAAGTAGAATTTCCACTTTACAATCAACCTTCCGATGCCCCAATGTACAAAGAGAATCAAAGGAAACACGTTTCTTTCAAACGACGcttattagaatattttaagaaaagaCACGTGGAGAAGGAGACGAGAAATTCGTACTTAACCGAAACGTATAGTAAACTTATGCAGGAATGGTTAAGGAAGGTGGAGAAAGTAGAATCTGGTGCTAAGAGAAAAGCAAAAGAGGCTAAAAATCGcgaatttttcgaaaaagtttttCCCGAATTGAGGAAACAAAGGGAGGATAAAGAGAGGTTTAACAGAGTGGGAGCTCGCATAAAATCTGAAGCGGATTTGGAAGAAATAATGGATAATTTACAAGAGCAAGCTTTGGAAGATAAAAAGATGCGTAGTTACGCGGTTATTCCCCCGATTTTGTTGGATTTGAAGGATAGGAAAGTGGCCTATAGGAATAACAACGGTCATGTGGTAAATATGGAAGCGGAATATAAAAGTAGACAGTTTTTGAATGTTTGGACGCCTAGTGAGaaggaaatttttaaagaaaaatatttgcaaCATCCTAAAAATTTTGGCGCGATAGCTTCGTATTTAGATAGGAAATCGGTTTCTGATTGCGTTCAGTactattatttaagtaaaaagacagaaaattataaacaattgtTGAGAAAGTCTCGACAGAGGACTAGGTCGTCGAGAAATAACACGCAAAAGGTTAATAATAGCGCGAACACTTCGGTGATTGATATTTTAACGACTGGGGTCACCACAAGACTGCAAAGGGAGCAACAGAAAACCACTGTCGCTCAAAATAGGGAAAATTCTGATACTCCCACTAATTCTTCTTCGTGTGCAACATCGACTGTTACGACTTCGTCTAGTGCTCCGTTAAGTTGTATCACAAGCATAGTGTTTTCTAATTCTTCTAATTCAACGACTATTACAAACTGTAACGTTTCGGGTGATTCTAGTATTCCCTCGACTTCGAGTACCACCGCCAGTACAGTAACTTCGACAGCAACTTCCACTGTATTGGCAACCACATCAATTTCTAGCATCAGTTCGAGCATGGCTGTGAATGTACCTGTAGCAAAATCGCCTAAATCTAGTAATGACAATGGAACAAGTGGTGATAGTGTTAAAAACTTTAGTGATATTAATTCTTCATGTGATGAAGCTAAAATTTCTAAACATGTTAGTGATAGTGCTGCTAAAACTTCTAAAGACACCACCGTTGATGGTAACCTTAACAACACCAGTGGAGACGTTCAAAAACCAGGAATTATTggtattaaaaaagaaattgaacTTGCACAAGAAAATAACGTCAGTGATCAAAGTGTGTCatcaaatgaaacaaaaaagaagaaagaacgAAGAAAAGATAAAGAAAATGCGACTATGGAATCTAGCGAGGACGAATCGATGGATGTTCaagCTTCCCATTTCAATATGATGTGGTTACGAGCTTAA
- Protein Sequence
- MRTRTLVNNTAALPSRSSNNRKKQGATGFSNVAMSRWPNHNPQTELYKPSRSPLANTARYPYPVSPQQLHNQVNQVSNQRYNVPSAVSFPQAGYREYRQPRISLLQEYNTRTREQISGGGSLVHHIEPIQGQTQQPYKKMRLQDQKDMQPLRIDTRPPSGAYNPQVEAISPTLPDHVQQEEQTYKTTKDDLLQKIGKVDREIAKAEAQIAILRQKERDLEELALKPLANPQTPEDTQPKHQSLAQKIYAENRKKAQNAHCKLDMLGSKVEFPLYNQPSDAPMYKENQRKHVSFKRRLLEYFKKRHVEKETRNSYLTETYSKLMQEWLRKVEKVESGAKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDNLQEQALEDKKMRSYAVIPPILLDLKDRKVAYRNNNGHVVNMEAEYKSRQFLNVWTPSEKEIFKEKYLQHPKNFGAIASYLDRKSVSDCVQYYYLSKKTENYKQLLRKSRQRTRSSRNNTQKVNNSANTSVIDILTTGVTTRLQREQQKTTVAQNRENSDTPTNSSSCATSTVTTSSSAPLSCITSIVFSNSSNSTTITNCNVSGDSSIPSTSSTTASTVTSTATSTVLATTSISSISSSMAVNVPVAKSPKSSNDNGTSGDSVKNFSDINSSCDEAKISKHVSDSAAKTSKDTTVDGNLNNTSGDVQKPGIIGIKKEIELAQENNVSDQSVSSNETKKKKERRKDKENATMESSEDESMDVQASHFNMMWLRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00950800;
- 90% Identity
- iTF_01293603;
- 80% Identity
- -