Cnig014496.1
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- -
- Assembly
- GCA_958510845.1
- Location
- OY294030.1:11766363-11766974[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-10 2e-07 31.8 0.0 3 39 4 41 2 42 0.96 2 2 3.6 5.1e+03 -1.5 0.0 7 16 128 137 127 139 0.81
Sequence Information
- Coding Sequence
- ATGAATCTTACTTggacagaaaatgaaaaattcaaacttttggaAGCTCTCCGAAAATATGGAGTTCACAATTTAGATGTTATTGCAGATCACGTTGGTTCAAAAACAGTTGCAGAAGTTAAATATGCAATTTACTTATACGAAGATGCCGCCAAGGAATCATTGAAAGAAGTTCGCTCCACAAGTAGAAGTGCACCAATCGATAAATGGTTAAATGTTCTGAAAAAAATACCCCCGATAACTTATGCTTCAAAGGATATCGTGACTGCCTTTAGATTGATTGCACAATATGAAGAATCACAAGAGTCTGACGTAAATTTAAGTGACTGCTACGATTTTATAGCAGATTTGATGTCTGGAAATGCACCTAAGAAGTTAAACGAAGAAACTGAAAAGTTTGTGTTACTGTGTATGATGAAATTGTCTGCATTTATAAATGAGCAGGACAACACCAAAGAGAAAGAGTTTTTGGAAAATCTCAAATATGAAACCGTCATGCAGCAATCTTATATTAGTAAGACAAAAAATGCACCTGTCGTTACAGATCCTTCGCTCAATTTACTTAAAGTCCCTAAAGAGCTTCTAAAAATGAAAGAAACTCatcaattttaa
- Protein Sequence
- MNLTWTENEKFKLLEALRKYGVHNLDVIADHVGSKTVAEVKYAIYLYEDAAKESLKEVRSTSRSAPIDKWLNVLKKIPPITYASKDIVTAFRLIAQYEESQESDVNLSDCYDFIADLMSGNAPKKLNEETEKFVLLCMMKLSAFINEQDNTKEKEFLENLKYETVMQQSYISKTKNAPVVTDPSLNLLKVPKELLKMKETHQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00272460;
- 90% Identity
- iTF_00272460; iTF_00268176; iTF_00269728;
- 80% Identity
- -