Cnig014498.1
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- -
- Assembly
- GCA_958510845.1
- Location
- OY294030.1:11773867-11774469[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 1.8e-06 28.8 0.1 3 38 4 40 2 42 0.97 2 2 0.16 2.3e+02 2.9 0.0 21 36 110 125 83 137 0.81
Sequence Information
- Coding Sequence
- ATGAATCTAACATGGACAgaaatagaaaagaaaaaacTTTTGGAAGCGTTGCAAAAATATGGAGTTACCAATTTGCAAGTGATTGCAAACCATGTTGAAACTAAATCGATTGCAGAATGTGGGTATGCAATTAAATTATATGAGCAAGCCGCAATAGATTCGCTCAAAGAAATTTCATCAAAAGATGTCAGAGAAGCACCCATCGATAAATGGCTCaacttgatgaaaaaaatttcacCCGACAGTTACAGTTCAAAAGATATTGCCACTGCGTTTAAATTAATCGCACAATACGAAGATAAACAAGGCAGTAGTATAAATTTAAGTGGATGTTACGATTTTATTGCAGATTTAATGTGTGGAAGACCACCCAAAAAATTAGAACAAGAAACCGaacaatttttacttatgtGTATTGTGAAATTGTCCGAAATTGTTAATAAGCAAGATAATTCGAAAGAAATTAactatttaaataacttaaagtatgaaGATATTGTATCAAAATCTTACGGTAGCAAGGCATCAGTTGTATCCGATCCTGCTCTCAATGTACTTAAAGTACCCAAGGAGCTTcttaaaatgaagaaatttagtaattaa
- Protein Sequence
- MNLTWTEIEKKKLLEALQKYGVTNLQVIANHVETKSIAECGYAIKLYEQAAIDSLKEISSKDVREAPIDKWLNLMKKISPDSYSSKDIATAFKLIAQYEDKQGSSINLSGCYDFIADLMCGRPPKKLEQETEQFLLMCIVKLSEIVNKQDNSKEINYLNNLKYEDIVSKSYGSKASVVSDPALNVLKVPKELLKMKKFSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00272452;
- 90% Identity
- iTF_00268175;
- 80% Identity
- -