Cnig014960.1
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- kn
- Assembly
- GCA_958510845.1
- Location
- OY294030.1:16628765-16652954[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-94 1.1e-90 305.5 0.0 6 182 18 184 14 184 0.96
Sequence Information
- Coding Sequence
- ATGTTCGGATTGCACCATCATCAGGATGCTGCAGGTTTACATCATCACCACCAACCACGTGGCCCTAGTCTTAAAGAAGAACCCCTATCAACCACAAGGTCGTGGATGCAACCTTCCATGCAGGATCAAAATTCAATTGGTGTCGGAAGAGCACACTTCGAAAAGCAACCCCCAAGCAATCTACGAAAATCCAACTTCTTCCACTTTGTCATAGCGCTCTATGATCGGGCGGGGCAGCCCGTGGAAATTGAACGCACAGCCTTCATTGGATTTATCGAAAAAGATCAGGAAACTGAAGGACCAAAAACAAATAACGGAATACAATATAGACTTCAACTTTTATATGCAAATGGTGTGCGACAAGAGCAAGACATCTACGTTAGGCTGATCGATTCGGTTACGAAGCAAGCAATAATATACGAAGGACAAGACAAAAATCCAGAAATGTGCCGTGTTCTACTAACTCATGAAGTGATGTGCAGTCGGTGTTGCGATAAAAAAAGTTGCGGGAATCGCAACGAAACTCCGTCAGATCCTGTGATAATAGACAGGTAA
- Protein Sequence
- MFGLHHHQDAAGLHHHHQPRGPSLKEEPLSTTRSWMQPSMQDQNSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQETEGPKTNNGIQYRLQLLYANGVRQEQDIYVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00277929; iTF_00429674; iTF_00870347; iTF_00752733; iTF_00732435; iTF_00731255; iTF_00421981;
- 90% Identity
- iTF_00429674;
- 80% Identity
- -