Cnig014961.2
Basic Information
- Insect
- Cantharis nigra
- Gene Symbol
- kn
- Assembly
- GCA_958510845.1
- Location
- OY294030.1:16672365-16676395[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-124 1.1e-120 404.5 0.0 205 387 1 195 1 202 0.99 2 2 7.4e-08 0.00081 18.7 15.8 422 561 210 340 199 350 0.68
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAAgTTGTTATTGCTACTCAAGTGAGCGTCGAGGGACCACTATTGGCTATTTCCGATAACATGTTTGTGCATAATAATTCAAAGCATGGGAGAAGAGCAAAAAGGCTGGATCCCTCCGAAGGTACTTATATAAACAgTTTATATCCTCCTCTACCCGTAGCAACCCCCTGTATCAAAGCCATCAGTCCAAGTGAAGGATGGACTTCGGGTGGATCTACCGTCATTATCGTCGGAGATAACTTCTTTGACGGATTACAAGTTGTATTTGGGACCATGTTAGTTTGGAGCGagTTAATAACGCCGCACGCGATACGAGTTCAAACACCTCCGAGACATATTCCAGGAGTAGTTGAAGTTACATTATCATATAAATCAAAGCAGTTCTGCAAAGGGGCACCGGGCAGATTTGTATATGTTTcACTAAATGAACCAACAATAGACTACGGTTTTCAAAGATTACAAAAACTTATACCGAGGCATCCGGGAGATCCAGAAAAATTACCTAAAgaaattatattgaaaagaGCGGCAGATTTAGCCGAAGCTTTATACACAATGCCCCGAAATAATCAGTTATCACTTACGGGGCCAAGATCGCCAACAATGGGAAACAATGGAATGACACCGACATTTAACACGTACACAGGGCAGTTATCAGTCAGCGTTCAGGACAGCGGAAACGGTCAGTGGACAGAAGAGGATTACGGAAGAACGCAAAGTAGCAGTGTGTCACCTAGAGGTGGTGGTTATTGCTCCAGCGCATCCACTCCTCACTCATCCAACGGTGGAGGATCCTACGTAGGCAACATGAATAGTTATGGCAATTCGACTCCAACAAGTAGTTCCCAATTATCTAACATGATTTCCGGCGCACCATCGCCAGGGATATTTAATTCTACTCCAAtttctcCGGAGTCGAGTCATTATCATTTTGGCGCACACAACCATAAACCGGACAAAGAGAAAAGCGCGTTCGCCCCGGTGATACGGGGAAACTCGACCTCCCCTGCTCACCCACCGGCACCCGCGCTTTTCCACCATCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAAtgttag
- Protein Sequence
- MRRFQVVIATQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTYINSLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLTGPRSPTMGNNGMTPTFNTYTGQLSVSVQDSGNGQWTEEDYGRTQSSSVSPRGGGYCSSASTPHSSNGGGSYVGNMNSYGNSTPTSSSQLSNMISGAPSPGIFNSTPISPESSHYHFGAHNHKPDKEKSAFAPVIRGNSTSPAHPPAPALFHHQPVTGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00964914;
- 90% Identity
- iTF_00464450;
- 80% Identity
- iTF_01291261;