Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720624.1:1804041-1807430[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 7.1 8.1 0.0 1 23 319 342 319 342 0.90

2 10 0.025 1.3 10.4 2.4 1 23 348 370 348 370 0.97

3 10 1.5e-05 0.00079 20.5 3.1 2 23 440 461 440 461 0.98

4 10 3.5e-06 0.00018 22.5 3.4 2 23 604 626 604 626 0.96

5 10 0.0077 0.4 12.0 5.5 1 23 632 654 632 654 0.99

6 10 0.74 39 5.7 0.3 2 23 659 681 658 681 0.87

7 10 0.0015 0.08 14.2 2.8 2 23 688 709 687 709 0.97

8 10 0.00046 0.024 15.8 0.8 1 23 715 737 715 737 0.95

9 10 0.27 14 7.1 3.3 1 21 741 761 741 763 0.95

10 10 0.014 0.75 11.1 1.8 1 23 773 796 773 796 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	7.1	8.1	0.0	1	23	319	342	319	342	0.90
2	10	0.025	1.3	10.4	2.4	1	23	348	370	348	370	0.97
3	10	1.5e-05	0.00079	20.5	3.1	2	23	440	461	440	461	0.98
4	10	3.5e-06	0.00018	22.5	3.4	2	23	604	626	604	626	0.96
5	10	0.0077	0.4	12.0	5.5	1	23	632	654	632	654	0.99
6	10	0.74	39	5.7	0.3	2	23	659	681	658	681	0.87
7	10	0.0015	0.08	14.2	2.8	2	23	688	709	687	709	0.97
8	10	0.00046	0.024	15.8	0.8	1	23	715	737	715	737	0.95
9	10	0.27	14	7.1	3.3	1	21	741	761	741	763	0.95
10	10	0.014	0.75	11.1	1.8	1	23	773	796	773	796	0.96

Sequence Information

Coding Sequence: ATGCATTACATAAAAGATTTCTGTCGAGTGTGCCTACGCTCCGAAATTCTTATGCAAGAtctaaaaaagaatttaaacgATGAAAATAGCGATACTTTATTAACCAAGTTGCAAACTTGTGTTATGGAAGTGGAGTGGTCAACAATGAGGCACGTCTTGATTTGTGCTTTGTGTGTCGATCGATTAAATTCTGCTTTCGAATTCAAACGCCAGTGCTTGAGCACCACTAAAGTTCTCGAaggttactttttaaaattggaaaaggaAAACAgcgaattgaaaacttttcgtGTAAATGTATCTAGGAAAGATATCGAACAAAACATTATCGACAATTATATCAAACAAGAAGCACAAAAATCGATTGAAAGGGGCAAGTTACAGGAAGCTTTGCAGGTGAAGCCCGCTGTTAAACGTTTTCTTCCCACCTTAACGAGTTTAATTGTGCCTCCcaataataacaacaacaatcaaaatacattccaaaacatttttctaaatttaataccTACACCGCCTAAAGTAAAAGTGAAACCTAAGGATAGACCCATTAAACTAGCTCCGAAGAAAAACGTGAATATCAATAATACgtatcaaattttttctccTAATCTAACCGAAAGTACAAATATTTCGTCACAAATTTTGACGATTCCCGACAATGGAACTTCATCAAATGGCACAGTTCAAACGGAAGAATTAAGCGTGGAACTGGACCCCAGTATGTTTGATTGCTCACCGGAAGTGGAGGCAGTTCCCGAAAACGCAGGAAACGATTGGGAGGACATAATTTCGAGCAATAAGATTGTTCCCGGTGCTGTGACTCCTGCAAGCGAAGATAAAAATACTCCTTTACAACTTTCGAACGAAGTGCAACAAAATCTCGAAGACTATTTCAATATAGACCATTTTATGGCATTGAAAGAAGCCAAGCCTAAAGGCCCTCCAAAGGCGTTTCCTTGTGTGCAATGTGGCAAAATTTCTGAAACATTCAAATCTTTGGTAGATCACATCGGGGAAGTTCACTTGGGTAAATTTCCTTACAATTGTAGCTACTGTTCGTCTACATTTGCTCTTACCTCGCATTATGAAACGCACATTCAAGAACACACACGATTCTTTTCAAATCCTCTACACAAAGATATGCTAACTCTAGAAGATGTATCGATTCACAACGAATCGGTATTGTTTCCAAAAACTGTTATAACTGTAGACGACGATTCTGACTGTGAAATAAGAAGTGTCGACTTGTGGAACGTTTCGCGATCTAAAAAGGAATCTAAGAAGAAGTATTTTGTTAAGGGCGTGAAAAATGCCAAGTGTCACATTTGTGAACGACAATTTTCAACCCAATCCTACTTACAATCTCacattaaattgcattatcgGAAAAGCGATTACCGGCTTAAAGTTCACGACGAAAGTAACAAACAGTCCTCGTCTTTCGAcgttgattttgaaaatgaaatatcaaaatcggaaattttaatcgaaaattatgtaaaatcgCCAGAACCAAATGTTACCAGCAATTTAAGGACTTTGCTggaaggaaaaaatttaaaagaagttGAAGATAAGGAAGACATGATGGACGATTGCGAAGAGATTGTTTCTGAATCTGTGGGCGAATTTCAAGGTAGCGAGGTCATCGACGATGGTTTGCTTAATCCAATGAGCGATGTATCCGCCGAAAATAGTATGGACTGTGATGCACACTTGGAAGGAGGCGATCCAATTAAAGAAGGGGAATCGCCTAACGAGCGACGTCCTCCTTATCTACAATTAACTACAGAGAATGGAAAGCCACAATGCaacatttgttttaaagtGTTTAGTAGGAGGCACGATTTGAAGAGGCATATGAACAATATTCACTTAAAAACGATACAATATACGTGTCACTTATGTAATAGTTACTTCTACGAGGCATTTCATCTGACCAGACATTTGCGTATTCACGTCGGTTTTGTTAAATGTACCATTTGCTTTAAAGATTTTAGTGCGGTACGCGACTTGAAGTTTCACATCATGGGCTCGCACGATAATTGTGCTTCGGGTCAGTGTGGGATGTGCGGGCAACACTTTCAAAGAATTAAGCATTTGCGCGAGCACATGCAAGAACACGAAAAtagtattttgtataaatgtcACATTTGTGGGGACGAATTTAGGGAATCGCGTGAACTGACCAGGCATTTGGTTGGCCACAGTGGAATGTATTCGTGCAGTTTATGCGCAACAACTTTATCCAACGAACACGAACTAAGTAATCATATGAAGTGTCACAATGAATTTACTCAAACGGAACGAAAGTATGCGTGCTCATTTTGTAGTAATAGATACAAagaaaaaagatatttaaatttgcatatgAGAAATGTACACCCAGTAGaatacgaaaatatttaa
Protein Sequence: MHYIKDFCRVCLRSEILMQDLKKNLNDENSDTLLTKLQTCVMEVEWSTMRHVLICALCVDRLNSAFEFKRQCLSTTKVLEGYFLKLEKENSELKTFRVNVSRKDIEQNIIDNYIKQEAQKSIERGKLQEALQVKPAVKRFLPTLTSLIVPPNNNNNNQNTFQNIFLNLIPTPPKVKVKPKDRPIKLAPKKNVNINNTYQIFSPNLTESTNISSQILTIPDNGTSSNGTVQTEELSVELDPSMFDCSPEVEAVPENAGNDWEDIISSNKIVPGAVTPASEDKNTPLQLSNEVQQNLEDYFNIDHFMALKEAKPKGPPKAFPCVQCGKISETFKSLVDHIGEVHLGKFPYNCSYCSSTFALTSHYETHIQEHTRFFSNPLHKDMLTLEDVSIHNESVLFPKTVITVDDDSDCEIRSVDLWNVSRSKKESKKKYFVKGVKNAKCHICERQFSTQSYLQSHIKLHYRKSDYRLKVHDESNKQSSSFDVDFENEISKSEILIENYVKSPEPNVTSNLRTLLEGKNLKEVEDKEDMMDDCEEIVSESVGEFQGSEVIDDGLLNPMSDVSAENSMDCDAHLEGGDPIKEGESPNERRPPYLQLTTENGKPQCNICFKVFSRRHDLKRHMNNIHLKTIQYTCHLCNSYFYEAFHLTRHLRIHVGFVKCTICFKDFSAVRDLKFHIMGSHDNCASGQCGMCGQHFQRIKHLREHMQEHENSILYKCHICGDEFRESRELTRHLVGHSGMYSCSLCATTLSNEHELSNHMKCHNEFTQTERKYACSFCSNRYKEKRYLNLHMRNVHPVEYENI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00273105;
90% Identity: -
80% Identity: -