Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:8397767-8399383[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 6.4e-05 0.0033 18.6 0.6 1 23 107 129 107 129 0.99

2 12 0.026 1.3 10.3 4.2 1 23 135 157 135 157 0.97

3 12 3.4e-05 0.0018 19.4 0.5 3 23 165 185 163 185 0.98

4 12 0.015 0.77 11.1 1.0 1 23 286 308 286 308 0.97

5 12 0.24 12 7.3 2.8 1 23 314 336 314 336 0.98

6 12 0.23 12 7.3 2.2 2 23 344 365 344 365 0.96

7 12 0.00073 0.038 15.2 0.9 1 23 371 393 371 393 0.98

8 12 2.4e-05 0.0012 19.9 0.2 2 23 400 421 399 421 0.97

9 12 9.6e-06 0.0005 21.1 0.8 1 23 426 448 426 448 0.98

10 12 0.00038 0.02 16.1 0.4 1 23 454 476 454 476 0.98

11 12 0.0058 0.3 12.4 0.9 1 23 482 504 482 504 0.93

12 12 0.00095 0.049 14.9 2.5 2 23 514 535 513 536 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	6.4e-05	0.0033	18.6	0.6	1	23	107	129	107	129	0.99
2	12	0.026	1.3	10.3	4.2	1	23	135	157	135	157	0.97
3	12	3.4e-05	0.0018	19.4	0.5	3	23	165	185	163	185	0.98
4	12	0.015	0.77	11.1	1.0	1	23	286	308	286	308	0.97
5	12	0.24	12	7.3	2.8	1	23	314	336	314	336	0.98
6	12	0.23	12	7.3	2.2	2	23	344	365	344	365	0.96
7	12	0.00073	0.038	15.2	0.9	1	23	371	393	371	393	0.98
8	12	2.4e-05	0.0012	19.9	0.2	2	23	400	421	399	421	0.97
9	12	9.6e-06	0.0005	21.1	0.8	1	23	426	448	426	448	0.98
10	12	0.00038	0.02	16.1	0.4	1	23	454	476	454	476	0.98
11	12	0.0058	0.3	12.4	0.9	1	23	482	504	482	504	0.93
12	12	0.00095	0.049	14.9	2.5	2	23	514	535	513	536	0.94

Sequence Information

Coding Sequence: ATGGTTAAAGTGAAAAGAATTAGGAGCACAGTACAAACTACCAGCAGTAACTCGGCTTGCAATCCCGCCTTAAAAATGGTGGTAAATATGGTGCCATATAAACCGATAAAATTACCTCGACCCATTTACACcataatacaaaaacaaacacGTGAACGTGTTAAATCTCAACCTAGGATTTTACCGTACCCCGAGTCTACAGtgaatggatttttaaaatctaaccCAATCCAAGTTGTACACCCATGCGATTCTTGTACGGACTATAAATGTTtgaataaatgcaatttaagaGCACAGGAAAAAACCAGGAAACCTTACGAGTGCGAAATTTGCGGCTACAAAACTATAAGGAAAGCCTCTCTCTCGATGCATTTCCGAACTCACCGAGGCGACAAACAGTTTTCTTGCGATATGTGTGGCTGTAAGTTTTTGCAAAAGAATCTCTTaatgaaacatttaaaatttcacacaGACATAACTCCATTTGGGTGCAACATTTGTGATTTGAAGTTTTCACGAAACGATCAGCTGCTGTATCATTTAAAAGTTCACGAAGATGAAAAGTCAACTCATTTGTCCAACAATAATGAAGACAAGAAATTTCTTGGTGCCGAAAATgggttaattataaaaatggagACTGTGATCGAAGAATTTCAAGATACGCAGGCTGCTTCGGGACCGGGGGAAGATTTCCACGAATTTGTTTGTGTGAAAAAGGAACCCGAGATTTTCGAAGAAGAAAAATTCGAATACGAAACTTGCAGGCGTTCGGTATACATTAAAGAAAATCCGCTTCTTGAAAATCCACATGACGAATTGGAACTTGAAGACGAAACAAATGAAATACCATATTTTTGCGACATTTGCACCTACAAAAGTTCGGACGTGTTAAGTTTATCCAGACACTTACGAAACCACACGGGGCTGAAACCCTTTACGTGTGATTTCTGCGATTTCCAATGTGCAATCGAAAGAAATgtaacaaaacatttaaagAGTCACAGTGTAGACGAAAGAACGCGCGTGTGCGAAGTCTGCGAtgcaaagtttttgtttaaacgAAGTTTCGAAAAGCATATGTCGCATCACACAAACAATACGACGTTTCCATGCAAAATCTGCGGCTTGAGATTTTCAAGGTATTTGGATAAAGTACAACATTTAAAGACACACACGGAGGAAGAGTTGCTCACATGCGAAATTTGTGGTTTACGGGTATCGAATAAATCGGAGCTCAAAGATCATTTAATGAAGcacaaaactgaaaaatacaaTTGTGATGTCTGcgggttaaaattttcaagggAGTATCAGTTGAGAAGTCACTCGAGAATTCATAGCGCCATAATTCCGTTTGAATGCGAAATTTGTCATTTGAAGTTTGCGGAAGAAGCCTTCCTGCAGGTTCATATAAGAAATCATACGGGTAAGAAACCATTTCAATGTCGTGTGTGTCCCATGAACTTTAATCGTGAAATTCATTTAAAGCTACATAATGTGGTTCACATGACTTTTGGGTTGGGGAAACAACTCATATGTGAGTGGTGCGATTACAAATGTGTGTTGAAAGGAGAACTGCGGAAACACATAAAAACTCACCACTGTGAttaa
Protein Sequence: MVKVKRIRSTVQTTSSNSACNPALKMVVNMVPYKPIKLPRPIYTIIQKQTRERVKSQPRILPYPESTVNGFLKSNPIQVVHPCDSCTDYKCLNKCNLRAQEKTRKPYECEICGYKTIRKASLSMHFRTHRGDKQFSCDMCGCKFLQKNLLMKHLKFHTDITPFGCNICDLKFSRNDQLLYHLKVHEDEKSTHLSNNNEDKKFLGAENGLIIKMETVIEEFQDTQAASGPGEDFHEFVCVKKEPEIFEEEKFEYETCRRSVYIKENPLLENPHDELELEDETNEIPYFCDICTYKSSDVLSLSRHLRNHTGLKPFTCDFCDFQCAIERNVTKHLKSHSVDERTRVCEVCDAKFLFKRSFEKHMSHHTNNTTFPCKICGLRFSRYLDKVQHLKTHTEEELLTCEICGLRVSNKSELKDHLMKHKTEKYNCDVCGLKFSREYQLRSHSRIHSAIIPFECEICHLKFAEEAFLQVHIRNHTGKKPFQCRVCPMNFNREIHLKLHNVVHMTFGLGKQLICEWCDYKCVLKGELRKHIKTHHCD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00269038;
90% Identity: -
80% Identity: -