Basic Information

Insect: Cantharis lateralis
Gene Symbol: pita
Assembly: GCA_963170105.1
Location: OY720629.1:9135155-9139043[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0045 0.24 12.7 0.3 1 23 220 242 220 242 0.96

2 10 3.8e-06 0.0002 22.4 1.3 1 23 248 270 248 270 0.98

3 10 9.8e-05 0.0051 18.0 1.7 1 23 276 298 276 298 0.98

4 10 0.05 2.6 9.4 0.3 1 23 304 326 304 326 0.94

5 10 0.00025 0.013 16.7 0.8 1 23 332 354 332 354 0.97

6 10 4.4e-05 0.0023 19.1 1.9 1 23 360 382 360 382 0.98

7 10 0.00017 0.009 17.2 5.3 1 23 388 410 388 410 0.98

8 10 0.00011 0.0056 17.8 1.3 1 23 424 446 424 446 0.95

9 10 0.0014 0.072 14.3 0.3 2 23 452 473 451 473 0.97

10 10 1.6e-05 0.00082 20.5 0.3 1 23 479 501 479 501 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0045	0.24	12.7	0.3	1	23	220	242	220	242	0.96
2	10	3.8e-06	0.0002	22.4	1.3	1	23	248	270	248	270	0.98
3	10	9.8e-05	0.0051	18.0	1.7	1	23	276	298	276	298	0.98
4	10	0.05	2.6	9.4	0.3	1	23	304	326	304	326	0.94
5	10	0.00025	0.013	16.7	0.8	1	23	332	354	332	354	0.97
6	10	4.4e-05	0.0023	19.1	1.9	1	23	360	382	360	382	0.98
7	10	0.00017	0.009	17.2	5.3	1	23	388	410	388	410	0.98
8	10	0.00011	0.0056	17.8	1.3	1	23	424	446	424	446	0.95
9	10	0.0014	0.072	14.3	0.3	2	23	452	473	451	473	0.97
10	10	1.6e-05	0.00082	20.5	0.3	1	23	479	501	479	501	0.97

Sequence Information

Coding Sequence: ATGGAGGAACGGTCCAATATATTACgtgaaatgaaaatatgcAGATTCTGTTTAAACGAACAAGAACCACTGAGCAACATTTACGAAAAAGATGCTAAACAAACGATACCGCTTCCTCTACAAATCATGTCTTGCGTTGCCATCGAGGTCTTTCCAAATGATGGAATGCCACAACTGATTTGTAAAACATGCCGGACGTTAACCCAACAAGCCTATTGCTTCAAAACTTCTTGTAAACGATCAGATGATGCTCTTAAATTGTTTGTAGCTACTGGTTCTCTGGTAAAAccaaatattgtaaatttcactttaattGACGACGAAGCAGAAGTatcagaaaatgaaaaacctGCGTCAAAGAAGCGTAGTTTACAGGAACCTCAGCAATCtccttttccaaaaatatcaaaaacctCGTCTTCGGAATTTGTTACCCTTAATTATACAACCAATATAGATTTGTCTGGTAAAAATAGCGCCATTATTACGAGTGCAGAGGTAACGCACCACGATCGCACCGAAGGAGAGCAGATTATCGAATTAGGAGATGTCCAACCATTGGAAGAAGTAGTAGACCAAGATCCATTTGACGACATTCATATGAATATGGTAGAAAAGAATCCAGTGTTTGAAGTTCCTCAGgTGAAAACTGATGTATTTCCATGTCCTCATTGTGAAAGATCGTTTCCATTGGAACAATTACTTGATATACATGTAAAAAATCATATCAGGGATCGTGGTTTTTCTTGCGAGGAATGTGGAAGAaggttttttacaaaatacgaTTTGGGCAAACACATTCAAACTCATTCTGATTTAAAGCCGTTTACTTGCGTGGTGTGCAACAAGCAGTTTGCACGCGAATCTTTATTGCATCGACATGAGAAAATACACAAtgatgtacctaaatatttatgttcatTTTGTGATCGCACATTTCTTACGAGCGATGATTTGGATATACATGcagaaaaacacaaaaagaaGAGACCATTTGCTTGTCgattatgtaataaaagttttgtgtTTAAGCAAGGATTAGAGCGTCATGAATTAACTCACGCTGATCAAAAACCACACAAGTGTAACTACTGCGAGGCCAGCTTTACATCACCCATTAAATTAACTCGGCATATTACATCGCACGCCGGTTTGCGTCCTTATCCTTGCAAACAATGTGGAAGAACATTTTTACTTAGCCATCACCTTACTAGACATATGAGAAGTCATTTTGCTGCCAAGTCTTCCCATGTTTCTGCTGTTGGACAGCATAAATGCGACGTGTGCAGCATGAGCTTCAGACGCAAAGATTCGCTTATCAATCACAGTGCAATTCATTctatggtaaatttaaaatgtgtcATATGCAATACTTCATTTGAAACTGCAAAAATGGTTAAGGAACATATTACCACTCATTTATCAGGCTTGCCGTACCCTTGCGATAAatgcGATTACTCCTTTGATACACAAGATCAGCTGGAAGAGCACGAATTGAAGCATGCCGAAATGGAATACGAAGAGCAAATTGAAAAGGAAGTAAACATGGAACAGCTCGCAAACGAAGAAGACTACGAATCGGATGATGAAAGTATAACGGAgtttactattacaaattctgaAAATCCCGAAGTGGTCAGGAGGTCCAAACGAGagccaaaaattaaaaattatgctcaATTCTTGAAAGACGAGCTAGGATCGGACGTGGAAGATCAAGTTGTTGATGAAGAATTGcaagaggaagaagaagaagaaatcaTTAAACCTGTCATTAGAACCGAAGGAACCAGGGTTTACTTCAGAAAGAATACTATGGAGAAACCTAAAGTAGTTCCGATTCTAAAACCAGAAGACGTTCAAACAGCACCATTAGAAGAAATTACGCAGCCTACACAACCGAATTTAAGTTTGTTAGATAACTTAGGCATCGGGAATCAGGCTGTgcaagctttaaataataaaaagtttgttgATATGAAAATTGGAGATAAAACAGTTCGTGTGCAAAAGTTAATTCTCACGAAAGCCGAAATTGAAGTTATGGCACGGCAaggtaaaattgaaatgaagGGAAATacgattttattaaagaataatAAGAGTTCTTTACATGAGGGCGCGACGAAAGCGGTTAGTCATAATACTATACCGACTGTACCGAAATCTGTAATTAAGAAAACTTACGTAAGAAAACCCAACTTACTTCGGAATGTTTCTCAGCCTAAACAACAACCTAGCACAAGCAGTGTGGGAACTTCCGAACAAAATGTGAGTATTGATTCTAAGTTAAGTGCAAGTGAAGCTACGGAAGTTGAAAATGATgcttaa
Protein Sequence: MEERSNILREMKICRFCLNEQEPLSNIYEKDAKQTIPLPLQIMSCVAIEVFPNDGMPQLICKTCRTLTQQAYCFKTSCKRSDDALKLFVATGSLVKPNIVNFTLIDDEAEVSENEKPASKKRSLQEPQQSPFPKISKTSSSEFVTLNYTTNIDLSGKNSAIITSAEVTHHDRTEGEQIIELGDVQPLEEVVDQDPFDDIHMNMVEKNPVFEVPQVKTDVFPCPHCERSFPLEQLLDIHVKNHIRDRGFSCEECGRRFFTKYDLGKHIQTHSDLKPFTCVVCNKQFARESLLHRHEKIHNDVPKYLCSFCDRTFLTSDDLDIHAEKHKKKRPFACRLCNKSFVFKQGLERHELTHADQKPHKCNYCEASFTSPIKLTRHITSHAGLRPYPCKQCGRTFLLSHHLTRHMRSHFAAKSSHVSAVGQHKCDVCSMSFRRKDSLINHSAIHSMVNLKCVICNTSFETAKMVKEHITTHLSGLPYPCDKCDYSFDTQDQLEEHELKHAEMEYEEQIEKEVNMEQLANEEDYESDDESITEFTITNSENPEVVRRSKREPKIKNYAQFLKDELGSDVEDQVVDEELQEEEEEEIIKPVIRTEGTRVYFRKNTMEKPKVVPILKPEDVQTAPLEEITQPTQPNLSLLDNLGIGNQAVQALNNKKFVDMKIGDKTVRVQKLILTKAEIEVMARQGKIEMKGNTILLKNNKSSLHEGATKAVSHNTIPTVPKSVIKKTYVRKPNLLRNVSQPKQQPSTSSVGTSEQNVSIDSKLSASEATEVENDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00268999; iTF_00273038; iTF_00271727; iTF_01294212; iTF_00928014; iTF_01292463;
90% Identity: iTF_00268999;
80% Identity: -