Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:33651399-33653123[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0006 0.031 15.5 4.4 1 23 61 83 61 83 0.97

2 14 0.00032 0.017 16.3 3.2 1 23 89 111 89 111 0.97

3 14 0.081 4.2 8.8 1.2 1 23 117 139 117 139 0.96

4 14 0.00031 0.016 16.4 3.3 3 23 147 167 145 167 0.98

5 14 0.00091 0.047 14.9 3.1 1 23 205 227 205 227 0.96

6 14 8.3e-05 0.0043 18.2 1.2 1 23 233 255 233 255 0.97

7 14 0.00014 0.0074 17.4 2.7 1 23 261 283 261 283 0.98

8 14 0.44 23 6.5 1.1 2 23 336 357 335 357 0.91

9 14 0.0037 0.19 13.0 2.6 1 23 363 385 363 385 0.98

10 14 0.0023 0.12 13.7 6.2 1 23 391 413 391 413 0.98

11 14 0.00061 0.032 15.5 0.9 1 23 462 484 462 484 0.94

12 14 0.37 19 6.7 2.5 1 23 490 512 490 512 0.97

13 14 7.9e-05 0.0041 18.3 0.9 1 23 518 540 518 540 0.98

14 14 0.0018 0.092 14.0 6.5 1 23 546 568 546 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0006	0.031	15.5	4.4	1	23	61	83	61	83	0.97
2	14	0.00032	0.017	16.3	3.2	1	23	89	111	89	111	0.97
3	14	0.081	4.2	8.8	1.2	1	23	117	139	117	139	0.96
4	14	0.00031	0.016	16.4	3.3	3	23	147	167	145	167	0.98
5	14	0.00091	0.047	14.9	3.1	1	23	205	227	205	227	0.96
6	14	8.3e-05	0.0043	18.2	1.2	1	23	233	255	233	255	0.97
7	14	0.00014	0.0074	17.4	2.7	1	23	261	283	261	283	0.98
8	14	0.44	23	6.5	1.1	2	23	336	357	335	357	0.91
9	14	0.0037	0.19	13.0	2.6	1	23	363	385	363	385	0.98
10	14	0.0023	0.12	13.7	6.2	1	23	391	413	391	413	0.98
11	14	0.00061	0.032	15.5	0.9	1	23	462	484	462	484	0.94
12	14	0.37	19	6.7	2.5	1	23	490	512	490	512	0.97
13	14	7.9e-05	0.0041	18.3	0.9	1	23	518	540	518	540	0.98
14	14	0.0018	0.092	14.0	6.5	1	23	546	568	546	568	0.98

Sequence Information

Coding Sequence: ATGGATGAAGACAAATTCTTTGAAGTTTCGCAAAAGTACGAAAGCTTCCAAGTCGAAGTTAAATCCGAACAAATTGAATTGGACTTGGAAGACTTGCATCATTCGAtcgaaataaaagaagaagttCCTTTTCCGGAATTGAAACTGGCTAACGAAGGCgaagaaaaaataagcaaacCATTCAATTGCGACATTTGTGGCCACAAAAGTAGACGTAGACATGATTTGAAGGAACATCTAAGACTGCACACTGGTGACAAACCGTTTATATGCGAATTTTGTAACTACAAATGTGCACGTAGGTCAACTTTGAACAAACACTTAATGATTCATACTGGCGAGAGACCGTTTGAATGTGAATTTTGTGAGTATAAAAGTTTGCGGAAATCTGGGTTGAAGGAACATTTAACTACTCATACCGGAGAGAAACCGTTTGGTTGTGAATTTTGTGATTATAGGTGTGCGTTGAAGAGTAACTTGAAGAAACATTTAAGAACTCACACCAAAATACCTTCCGATACTGACTCTTTGAAGAAACCTACTCACGATAAACCATATGAAGTTGAAGACTttgtaaaaaaagatttaataactgagattttcgaaaaactataCAAGTGCTTGGTTTGTGGTTATGAATGTGCAGATCGATCGTCGTTGAAAAAGCATTCCAAGTTTCATATCGGCGATAAACCGTTTATGTGTGAATTGTGCGACTATAGAAGTTCAcggaaatcaaatttgaaagaacATGCAACTACTCATACTGGAGAGAAACCATTTGTATGTGAATTTTGCGACTACAGATGTGCATTGAAGAGTAACTTGAcaaagcatttaaaaatacatactgGCAAGAAACAACCTTCGGATGCTGGATCTTTGAAAATTCATATGAATGAACCATTTTTTATACTTGCAGTTTGTGACTTGACAAGTTTACAATTGTCGTGTTCGAAGAAACTACCACTCCTCGCTCCTGCTCCCACTGCCGAGAAATTATTGGAGTGTGAAGATTGTGACTATACATGTACAGACGACTTGATTTTGAAGAAACATTCAAAGATTCATATTATCGACAAACCatttaaatgtgaattttgTGACTATAGAAGTTCACGGAGATCAAGGTTGAAAGAGCATTCGATTACCCATACTGGAGAAAAACCGTTTGTTTGTGAGTTCTGTGGCCACCGATGTGCATTAAAGAGTAATCTAAGGAAGCATTTCAAAACTCATAACCGCAAGAAACCTTTCAACATTGATATATGTTCTTCGGAAACTGCATCGTCGACACTGCATATTGAAAAACCTGACGAGAAACCACTTGAACGTGAAGTTTGTGACTCTCAAGATGAACCAAGATTGTTATCGAAGAAACTATTTGAATGTGAAGTTTGTGGCTATAAATGTATATCCAGGTCGACTTTGATCAAACATTCGGTGATTCATACTGGTCAGAAACCGTTCGTGTGTAAATTATGTGACTACAAAAGTTCATGGAAATCATGTTTGAAAGAACATTCAATGATTCATACTGGGGAGAAGCCGTTTGTGTGCGAATTTTGTGACTACAGAACTTCACGGAAATCAAGTTTGAAGGAACATGCTATTACTCATACTGGCAAGAAGCCGTTCATGTGTGCAATTTGTTACCATAGGTGtacattaaaaagtaatttgaaaaagcaTTTAAGAACTCATATATTGTCTGGAAACCgctaa
Protein Sequence: MDEDKFFEVSQKYESFQVEVKSEQIELDLEDLHHSIEIKEEVPFPELKLANEGEEKISKPFNCDICGHKSRRRHDLKEHLRLHTGDKPFICEFCNYKCARRSTLNKHLMIHTGERPFECEFCEYKSLRKSGLKEHLTTHTGEKPFGCEFCDYRCALKSNLKKHLRTHTKIPSDTDSLKKPTHDKPYEVEDFVKKDLITEIFEKLYKCLVCGYECADRSSLKKHSKFHIGDKPFMCELCDYRSSRKSNLKEHATTHTGEKPFVCEFCDYRCALKSNLTKHLKIHTGKKQPSDAGSLKIHMNEPFFILAVCDLTSLQLSCSKKLPLLAPAPTAEKLLECEDCDYTCTDDLILKKHSKIHIIDKPFKCEFCDYRSSRRSRLKEHSITHTGEKPFVCEFCGHRCALKSNLRKHFKTHNRKKPFNIDICSSETASSTLHIEKPDEKPLEREVCDSQDEPRLLSKKLFECEVCGYKCISRSTLIKHSVIHTGQKPFVCKLCDYKSSWKSCLKEHSMIHTGEKPFVCEFCDYRTSRKSSLKEHAITHTGKKPFMCAICYHRCTLKSNLKKHLRTHILSGNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -