Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:37058543-37061639[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00016 0.0082 17.3 0.4 1 23 75 97 75 97 0.98

2 13 0.00017 0.0088 17.2 2.5 3 23 105 125 103 125 0.98

3 13 0.00011 0.0055 17.8 3.2 1 23 131 153 131 153 0.99

4 13 0.0044 0.23 12.8 1.7 3 23 161 181 159 181 0.97

5 13 0.00025 0.013 16.7 3.7 3 23 292 312 290 312 0.98

6 13 0.00029 0.015 16.5 3.1 1 23 318 340 318 340 0.99

7 13 0.00037 0.019 16.2 2.5 3 23 348 368 346 368 0.98

8 13 0.015 0.76 11.1 1.0 3 23 376 396 374 396 0.97

9 13 7.5e-05 0.0039 18.3 5.5 1 23 402 424 402 424 0.98

10 13 0.0033 0.17 13.2 3.7 3 23 432 452 430 452 0.98

11 13 0.0018 0.091 14.0 4.0 1 23 458 480 458 480 0.97

12 13 0.00017 0.0086 17.2 5.9 1 23 486 508 486 508 0.99

13 13 0.0017 0.09 14.0 2.9 3 23 516 537 514 537 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00016	0.0082	17.3	0.4	1	23	75	97	75	97	0.98
2	13	0.00017	0.0088	17.2	2.5	3	23	105	125	103	125	0.98
3	13	0.00011	0.0055	17.8	3.2	1	23	131	153	131	153	0.99
4	13	0.0044	0.23	12.8	1.7	3	23	161	181	159	181	0.97
5	13	0.00025	0.013	16.7	3.7	3	23	292	312	290	312	0.98
6	13	0.00029	0.015	16.5	3.1	1	23	318	340	318	340	0.99
7	13	0.00037	0.019	16.2	2.5	3	23	348	368	346	368	0.98
8	13	0.015	0.76	11.1	1.0	3	23	376	396	374	396	0.97
9	13	7.5e-05	0.0039	18.3	5.5	1	23	402	424	402	424	0.98
10	13	0.0033	0.17	13.2	3.7	3	23	432	452	430	452	0.98
11	13	0.0018	0.091	14.0	4.0	1	23	458	480	458	480	0.97
12	13	0.00017	0.0086	17.2	5.9	1	23	486	508	486	508	0.99
13	13	0.0017	0.09	14.0	2.9	3	23	516	537	514	537	0.95

Sequence Information

Coding Sequence: ATGGGAATTTCAGAATTCCAAAATGCCAGCGAAGACGTGGAGCTAAAATTCTTACATCATTCCATTGATATAAAAGATGAGATTTTAGAAAATGAAGTTGTATGTCCAGAAGAATCGGAAGGTGGCAGCGGAGAGATTTGGATCGGAGGGACGGGAGCAGATATCAAAGTTATTAAAGAGGAACTGTCTGATAACGAAGCACAACCGGATGTACagaaaccgtttgagtgtgAAATTTGCGGTTTTAAATCTTCTCGGAAAGGAGTTCTCCGGAATCATTTACTTACGCACACTGATAGGAAGCCGTTCGGGTGTgaaatttgcgattttaaatgttcCCGAAAGGGAGGTTTGAAAACTCATTTACGGACGCACACTCGGGAGAAACCGTTCGAGTGTAAAATgtgcgattataaatcttcTCTAAAAGCACACTTGAAAAGTCACATTCGAACTCATACCGGGGAAAAACCTTTCGGGTGCAATTtgtgcgattataaatgcGCTCTGAAGTACAATTTGACCAGTCATCAACTAATACACACGGAGGAAGTAAACTATGCCAGTAGAGAAATTAAGACGGAAGACATAGATATCAAGCTAGAAGATTTGCATCATCCCGTTGACAGTGCACACAACACTTCGGGCAACTACCAGGGGGTATTttcaaaagaagaagaagaaaatgaaaagaaaaatgttaaaattgaagCGATGGAGGACATGGATACCAAGCTGGAAAACCTGCACCATTCCATTACCATTAAAGAAGATCCTGCCGTTAACGAATTTCAACGGGATCACGACTGCGACAACCAATTTAACTGTCGAACATGCAACAATCAGGTTCCCACCGGTCAAAAACCCTTTGGatgcaaaatttgcaaattcaCATGTTCGaagaaaggaaatttaataaatcatttacgaactcatagcggcgaaaaaccatttaagtgcaaaatttgcgattataagtGTGCCCAGAAGGGCCGTTTGAAGGATCACTTACTCACTCAcaccggggaaaaaccgttcgggtgtgaaatttgcaattacaaatgTTCTCAACGAGGAGTTTTGAAACGGCACTTACGAACTCATACCGGAGTCAAGCCGTTCGGGTGCCAAATTTGCagttataaatgttctcaacAAGGAGTTTTGAATGATCATTTGCGAGCTCATGCAGGTGATCAGCCTTTCGAGTGCTACAtgtgcgattataaatgtttccGTAAGGGAAATTTAAAACGGCACCTACGAACACACACCGACAAAAAACCTTTTGGATGCAACCtctgcgattataaatgtgttCGACACGATGATTTGAAGGGTCACTTACGAACCCATTCGGGGGAGAAGCCGTTTGCGTGTAGAATGtgcgattttaaatgttctcgTAAATACGTTTTGAAAGTTCATCTACGAACACATACCGGAGAGAAACCCTACCGttgcaaaatttgcaattatcgATGTTCTCAAACCGGACATTTGAAAGTGCATTTACAAACTCATTCCGGTGAGAAACCGTTTGGGTGCCACTTGTGCGAATATAAATGTTCTCGTAAAGCTAATTTGAAAGCACACCTACTACTGATTCATAAAGACAAGAAAACCAAGGACTTGAATAAGTTGTTCGGGTGA
Protein Sequence: MGISEFQNASEDVELKFLHHSIDIKDEILENEVVCPEESEGGSGEIWIGGTGADIKVIKEELSDNEAQPDVQKPFECEICGFKSSRKGVLRNHLLTHTDRKPFGCEICDFKCSRKGGLKTHLRTHTREKPFECKMCDYKSSLKAHLKSHIRTHTGEKPFGCNLCDYKCALKYNLTSHQLIHTEEVNYASREIKTEDIDIKLEDLHHPVDSAHNTSGNYQGVFSKEEEENEKKNVKIEAMEDMDTKLENLHHSITIKEDPAVNEFQRDHDCDNQFNCRTCNNQVPTGQKPFGCKICKFTCSKKGNLINHLRTHSGEKPFKCKICDYKCAQKGRLKDHLLTHTGEKPFGCEICNYKCSQRGVLKRHLRTHTGVKPFGCQICSYKCSQQGVLNDHLRAHAGDQPFECYMCDYKCFRKGNLKRHLRTHTDKKPFGCNLCDYKCVRHDDLKGHLRTHSGEKPFACRMCDFKCSRKYVLKVHLRTHTGEKPYRCKICNYRCSQTGHLKVHLQTHSGEKPFGCHLCEYKCSRKANLKAHLLLIHKDKKTKDLNKLFG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -