Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:37248922-37256706[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0026 0.14 13.5 2.5 1 23 78 100 78 100 0.96

2 12 0.011 0.56 11.5 1.4 1 23 163 185 163 185 0.98

3 12 0.00067 0.035 15.3 2.0 1 23 191 213 191 213 0.97

4 12 0.00015 0.0078 17.4 0.5 1 23 219 241 219 241 0.98

5 12 0.00018 0.0094 17.1 3.0 1 23 247 269 247 269 0.99

6 12 0.082 4.3 8.8 1.7 1 23 275 297 275 297 0.97

7 12 0.00016 0.0084 17.3 3.0 1 23 303 325 303 325 0.99

8 12 1.4e-05 0.00073 20.6 0.2 1 23 336 358 336 358 0.98

9 12 0.006 0.31 12.3 3.5 1 23 364 386 364 386 0.98

10 12 0.00098 0.051 14.8 5.1 1 23 392 414 392 414 0.97

11 12 1.6e-05 0.00085 20.4 2.2 1 23 420 442 420 442 0.99

12 12 4.8e-06 0.00025 22.1 1.0 1 23 448 470 448 470 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0026	0.14	13.5	2.5	1	23	78	100	78	100	0.96
2	12	0.011	0.56	11.5	1.4	1	23	163	185	163	185	0.98
3	12	0.00067	0.035	15.3	2.0	1	23	191	213	191	213	0.97
4	12	0.00015	0.0078	17.4	0.5	1	23	219	241	219	241	0.98
5	12	0.00018	0.0094	17.1	3.0	1	23	247	269	247	269	0.99
6	12	0.082	4.3	8.8	1.7	1	23	275	297	275	297	0.97
7	12	0.00016	0.0084	17.3	3.0	1	23	303	325	303	325	0.99
8	12	1.4e-05	0.00073	20.6	0.2	1	23	336	358	336	358	0.98
9	12	0.006	0.31	12.3	3.5	1	23	364	386	364	386	0.98
10	12	0.00098	0.051	14.8	5.1	1	23	392	414	392	414	0.97
11	12	1.6e-05	0.00085	20.4	2.2	1	23	420	442	420	442	0.99
12	12	4.8e-06	0.00025	22.1	1.0	1	23	448	470	448	470	0.99

Sequence Information

Coding Sequence: atggagGCTGTTCCTAAAATGGAAACTTCCTACCAATCCGATGACTACCCCAAAATCAAgatagaagaagaagaagaagagccggaattcaaatttgaagaaatagaAATCAAGGTGGAAGATTTGCATCATTCCATTGACATAAAAGAGGAGACTTACGTGCACGATGTAATAAGTATTCAACCGAAGGAAGAACCGGAAGAAGGCCAATCGGAAGACGCAGGGAAGCCGTTTGCGTGTGAGATTTGTACCTTTAAATGTGCTCGTAAAGACAGCTTAAAGCAGCATTTCATGattcatactggcgagaagccTTTTGAAACTCCGATCAATTCGAATGAGTACTCCGTAATAAAGACAGAAGAAGAGGAAgaaattgaatacaaattgGAAGATTTACATCATTCGATCGAAATTAAAGAAGAGACTACAACTCTAGAATTTCAATCGGTCGCAGAAGGTAAACCCCAAACCGGTAGGAAATTGTTCacgtgtgaaatttgtggcTACAAATGTGGACAACGAGGAATCTTACAAAATCACTTCAGAATTCACAACGGCGAAAAACCATTCacttgtgaaatttgtgagTGTCAATTTGCACGTAAAGGCGATTTAAGAATGCATTCGACCACTCATACCAACGAGAAACCGTTTATGTGTGAATTTTGTGGCTATGCGTCTGCGCGCACGGCCAACTTTAAGATTCATTTAAGgactcatactggcgagaaaccatttaggTGCGAGATTTGTGCGTACAAATGCTCAACTAAAGGGGTTTTAAAAAGACATTTAAGAACGCAcaccggggaaaaaccgttcAGGTGTGCACTCTGTGACTATAAATGTACGCAGAAAGGAAGGATAAGCGTCCACGTAAAAATTCATACTGGCGATAAGCCATTTACCTGTGTAATTTGCGACTATAAATGTACAAGTAAGGCTCGCTTGAAAATTCACTTAAGAACCCATACCGGCGAAAGACCAGTTAAGTCTAAAACTTTCACGTGTggaatttgtgattttaaaagtgCACGTCAGGCTGACTTGAACAGACATATCAGGATTCATACgggcgaaaaaccattttcgTGTAATTTTTGTGACTATAAATGCACTCAACAAGGAAGGCTAAGCATTCACGTGAGAAATCACACTGGCGAGAAGCCGTTTGCGTGTCAATtttgtgactataaatgtACGCATAAAGGAAATCTCAATATGCATTTAAAGGTTCATACGGGCGAGAAGCCGTTCACTTGTAAAATGTGCGATTTTGGATGTATACGACTGGATGATTTAAACAGACATATCAGGACTCACACTGGCGAGAAGCCGTTCaggtgtgaaatttgtgactaTAAATCTGCACGTAAAGGGAACTTACAAACTCATTTGAAAACTCATACAGGCGAGAAATTCTACAATAATTGTACAAATGAGTGGGAGGCTGAGAATAAATAG
Protein Sequence: MEAVPKMETSYQSDDYPKIKIEEEEEEPEFKFEEIEIKVEDLHHSIDIKEETYVHDVISIQPKEEPEEGQSEDAGKPFACEICTFKCARKDSLKQHFMIHTGEKPFETPINSNEYSVIKTEEEEEIEYKLEDLHHSIEIKEETTTLEFQSVAEGKPQTGRKLFTCEICGYKCGQRGILQNHFRIHNGEKPFTCEICECQFARKGDLRMHSTTHTNEKPFMCEFCGYASARTANFKIHLRTHTGEKPFRCEICAYKCSTKGVLKRHLRTHTGEKPFRCALCDYKCTQKGRISVHVKIHTGDKPFTCVICDYKCTSKARLKIHLRTHTGERPVKSKTFTCGICDFKSARQADLNRHIRIHTGEKPFSCNFCDYKCTQQGRLSIHVRNHTGEKPFACQFCDYKCTHKGNLNMHLKVHTGEKPFTCKMCDFGCIRLDDLNRHIRTHTGEKPFRCEICDYKSARKGNLQTHLKTHTGEKFYNNCTNEWEAENK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -