Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:11026207-11027685[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0019 0.098 13.9 0.3 2 23 77 98 76 98 0.96

2 15 0.00031 0.016 16.4 3.1 1 23 104 126 104 126 0.98

3 15 0.00056 0.029 15.6 1.4 1 23 132 154 132 154 0.97

4 15 0.0012 0.064 14.5 1.1 1 23 160 182 160 182 0.96

5 15 0.019 0.98 10.8 4.2 1 23 188 210 188 210 0.97

6 15 0.00025 0.013 16.7 1.4 1 23 216 238 216 238 0.98

7 15 0.00097 0.05 14.8 1.4 1 23 244 266 244 266 0.97

8 15 0.23 12 7.3 6.5 1 23 271 293 271 293 0.98

9 15 0.00095 0.049 14.9 0.4 1 23 299 321 299 321 0.97

10 15 9.7e-05 0.005 18.0 3.2 1 23 327 349 327 349 0.99

11 15 1.5e-05 0.00079 20.5 1.4 1 23 355 377 355 377 0.97

12 15 0.00014 0.0074 17.5 1.1 1 23 383 405 383 405 0.97

13 15 0.00025 0.013 16.7 1.7 1 23 411 433 411 433 0.98

14 15 0.0094 0.49 11.7 3.5 1 23 439 461 439 461 0.98

15 15 3.4e-05 0.0018 19.4 0.4 1 23 467 489 467 489 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0019	0.098	13.9	0.3	2	23	77	98	76	98	0.96
2	15	0.00031	0.016	16.4	3.1	1	23	104	126	104	126	0.98
3	15	0.00056	0.029	15.6	1.4	1	23	132	154	132	154	0.97
4	15	0.0012	0.064	14.5	1.1	1	23	160	182	160	182	0.96
5	15	0.019	0.98	10.8	4.2	1	23	188	210	188	210	0.97
6	15	0.00025	0.013	16.7	1.4	1	23	216	238	216	238	0.98
7	15	0.00097	0.05	14.8	1.4	1	23	244	266	244	266	0.97
8	15	0.23	12	7.3	6.5	1	23	271	293	271	293	0.98
9	15	0.00095	0.049	14.9	0.4	1	23	299	321	299	321	0.97
10	15	9.7e-05	0.005	18.0	3.2	1	23	327	349	327	349	0.99
11	15	1.5e-05	0.00079	20.5	1.4	1	23	355	377	355	377	0.97
12	15	0.00014	0.0074	17.5	1.1	1	23	383	405	383	405	0.97
13	15	0.00025	0.013	16.7	1.7	1	23	411	433	411	433	0.98
14	15	0.0094	0.49	11.7	3.5	1	23	439	461	439	461	0.98
15	15	3.4e-05	0.0018	19.4	0.4	1	23	467	489	467	489	0.98

Sequence Information

Coding Sequence: ATGAATAGTGAAGTTCCCCCAAGAGAGTTGCAAAATTCGGAACAATCTATTGAAAATATTCCAACCTTTTGTAATGTGAATATCAAATGTGAAGTCAAAACGGAAGACGAAGATGTGGAACTTCAATCGGAAGATGATATGGCGATCAAATTGGAAGATTTACATCATGCGATTGATatcaaagaagaaattttaccTTCGGAATCTCAACCGGTtgcagaaaaattgatttgcgACATTTGTAATGGAAAATTTGCCAACAAATTAACTTTGAAGAAACATGCACTAACCCATACCAGTGACAAACCCTTCCGatgcaaaatttgtgattacaaaACTTCCTATAAATACAATCTGATGCTTCATTCGAGAAATCATACCGGCGACAAACCTTTTGCTTGTGAACTCTGTAATTTTAAGTCTTCGTTTAAAAGTAGTTTAAAGATTCATGTAAGAACTCATACTGGAGAGAAGCCGTTTGCTTGTGAAATATGCGACTTTAAATGTGCTCGGAAGACTGGATTACAGCTTCATTTAAAAGGACATGCTGGCGAGAAACCTTTTGTATGTGAagtttgtgattttaaatgtgCCCATCAAAGAACATTTAAGGAGCATCTAAAAGCTCAtaccggggaaaaaccgtttaCGTGTGAAATTTGCAACTGGAAGTGTGCAACCaatgacaaattaaaactgcACTTAACGATTCATACTGGAGAAAAACCTTTCGCCTGCAAATTTTGCGATTTGAAGTTTGCGCTAAAACGATATTTGTCTGTCCATTTGAAAACTCATACCGATAAACCATTTTCGTGCGAATTTTGTGATTACAAATGTGCGCATAAGAGAAGAATTCGAGATCACATACGAAAGCATACaggcgaaaaaccatttgcGTGCGATATTTGCGACTTTAAATCTGCACAAAAGGCAAAATTACAGCTTCATTTAAGAAATCACACTGGAGAACAACGTTTCACGTGCGAATTTTGTGAACTTAAGTTTACACAAAAAGATAAATTCACTCTGCATTTGAGAACTCATTCAGGTGAGAAACCATTTATGTGCGAAATTTGTGGCTGGAAATGTACAACTAAAGATCAgttgaaattacatttaacGATCCATACTGGCGAAGTGCCTTTCGCCTGTAAATTTTGCGATATGAAGTTTGCACTAAAAACATATTTGAATGTTCATATAAAAACCCACGCCGGGGATAAGCCGTTCacgtgtgaaatttgtgagtATAAATGTTCAGAGAAGAGAACCCTAGAAGAACACATAAGAATCCATACTGGagagaaaccgtttgagtgtggattttgtaattttaaaactgcacATAGGAGAAGTTTAAAAGTCCACGTAAGGAAACATACGGGAGACAAACCGTACGCTTGcgaaatttgtgattataaaggTACACAAAGATCTCTATTAGTtcgacatttaaaaactcatagtgtagtttaa
Protein Sequence: MNSEVPPRELQNSEQSIENIPTFCNVNIKCEVKTEDEDVELQSEDDMAIKLEDLHHAIDIKEEILPSESQPVAEKLICDICNGKFANKLTLKKHALTHTSDKPFRCKICDYKTSYKYNLMLHSRNHTGDKPFACELCNFKSSFKSSLKIHVRTHTGEKPFACEICDFKCARKTGLQLHLKGHAGEKPFVCEVCDFKCAHQRTFKEHLKAHTGEKPFTCEICNWKCATNDKLKLHLTIHTGEKPFACKFCDLKFALKRYLSVHLKTHTDKPFSCEFCDYKCAHKRRIRDHIRKHTGEKPFACDICDFKSAQKAKLQLHLRNHTGEQRFTCEFCELKFTQKDKFTLHLRTHSGEKPFMCEICGWKCTTKDQLKLHLTIHTGEVPFACKFCDMKFALKTYLNVHIKTHAGDKPFTCEICEYKCSEKRTLEEHIRIHTGEKPFECGFCNFKTAHRRSLKVHVRKHTGDKPYACEICDYKGTQRSLLVRHLKTHSVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271596;
90% Identity: -
80% Identity: -