Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:37582757-37594393[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.011 0.55 11.6 0.4 1 23 57 80 57 80 0.89

2 18 3.4e-07 1.8e-05 25.7 2.0 1 23 86 108 86 108 0.99

3 18 0.026 1.3 10.3 0.6 1 23 114 136 114 136 0.93

4 18 0.00099 0.051 14.8 0.1 1 23 142 164 142 164 0.97

5 18 0.012 0.61 11.4 0.3 1 23 170 192 170 192 0.93

6 18 0.017 0.88 10.9 0.1 1 23 209 231 209 231 0.95

7 18 0.00021 0.011 16.9 2.3 1 23 237 259 237 259 0.96

8 18 4.2 2.2e+02 3.4 0.3 1 9 265 273 265 277 0.86

9 18 0.28 15 7.1 0.9 1 23 732 754 732 754 0.97

10 18 0.00058 0.03 15.5 0.9 1 23 760 782 760 782 0.98

11 18 0.091 4.7 8.6 0.4 1 23 788 810 788 810 0.97

12 18 0.016 0.82 11.0 0.8 1 23 816 838 816 838 0.97

13 18 6.8e-05 0.0035 18.5 2.5 1 23 844 866 844 866 0.98

14 18 0.0022 0.12 13.7 3.2 1 23 872 894 872 894 0.98

15 18 0.00079 0.041 15.1 0.6 1 23 900 922 900 922 0.98

16 18 5e-05 0.0026 18.9 0.6 1 23 928 950 928 950 0.98

17 18 0.0026 0.14 13.5 2.1 1 23 956 978 956 978 0.97

18 18 0.052 2.7 9.4 4.1 1 23 984 1006 984 1006 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.011	0.55	11.6	0.4	1	23	57	80	57	80	0.89
2	18	3.4e-07	1.8e-05	25.7	2.0	1	23	86	108	86	108	0.99
3	18	0.026	1.3	10.3	0.6	1	23	114	136	114	136	0.93
4	18	0.00099	0.051	14.8	0.1	1	23	142	164	142	164	0.97
5	18	0.012	0.61	11.4	0.3	1	23	170	192	170	192	0.93
6	18	0.017	0.88	10.9	0.1	1	23	209	231	209	231	0.95
7	18	0.00021	0.011	16.9	2.3	1	23	237	259	237	259	0.96
8	18	4.2	2.2e+02	3.4	0.3	1	9	265	273	265	277	0.86
9	18	0.28	15	7.1	0.9	1	23	732	754	732	754	0.97
10	18	0.00058	0.03	15.5	0.9	1	23	760	782	760	782	0.98
11	18	0.091	4.7	8.6	0.4	1	23	788	810	788	810	0.97
12	18	0.016	0.82	11.0	0.8	1	23	816	838	816	838	0.97
13	18	6.8e-05	0.0035	18.5	2.5	1	23	844	866	844	866	0.98
14	18	0.0022	0.12	13.7	3.2	1	23	872	894	872	894	0.98
15	18	0.00079	0.041	15.1	0.6	1	23	900	922	900	922	0.98
16	18	5e-05	0.0026	18.9	0.6	1	23	928	950	928	950	0.98
17	18	0.0026	0.14	13.5	2.1	1	23	956	978	956	978	0.97
18	18	0.052	2.7	9.4	4.1	1	23	984	1006	984	1006	0.95

Sequence Information

Coding Sequence: ATGGATCAAGTTTTGCAAACCCCATGCAGTATTGTTATTAAATCGGAACAAATCGAAGACGGTGATATCAAACTAGAAGAGCTGCATCATTCGATTGATATCAAAGATGACAGATCACTTCCCGAAGCACCAGCGGATGCAGAAACCGAAAGTCAAGTAAGCCGACTATTTGATTGTGCGGGGTGTAAAGCacaatttaccaataaatccCAACTCGGAAGACACAACGTGAAAGTTCATCGTgactcaaaattatttaaatgtgaagTTTGCGGCTACAATTTTACGAAACGGTCAAATCTGAAAGTTCATTTAAGGAGACACACTGGGGAGAAGCCCTTTGCTTGTGATGTTTGCGACTATCATGCTACAAGACTAACAGATTTAAAACGTCATTCGGTGATTCACACAGGGCAAAAACCGTTTGCGTGTGAAACGTGCGACTACAAAGCTTCAAGATCGGCAGACTTAAAAGTTCATTTAATGATTCACCTGGCCCAGCAACCGTTTGCATGTAATATTTGTGACTATAACTGTGCACGTGAGAGAGATTTAATAGCCCATTCGGTGATGCACACCGGAGAGAAACCCTTTACGTGTGAAATACATACTGGGGAGAAACCCTTCGCCTGCGAGATTTGTGACTACAAAGCTTTAAGATCGGGAGATTTAAAACGTCATTTAATGATTCATACGGGAGACAAGCCCCATGCGTGTGAACTTTGTGACTCCAAATTTACACAAAAGGAAACTTTAAAGGTTCATTTAAGAAGACATACTGGGGAAAGGCCGTAtacgtgtgaaatttgtggcTACAAATCTACGCTAAACGCACGGGATTGCTGCACCAAGTGGAGGAGTATGATGCAGTCCTTCTGGAAGATAAAGTGTCTATCGGAGTGCTATTCTGAGACGGAAGATGATTTAAACTCTAAACTATATCAACAATTTATGAGGAATTATTCTCGTTGGGAGGCGATTTATTTGTACAACAGTCAACTCGAAAACAATTGGctcaaacaaaattacagaactgttGTAAATACGGTGGAAAAACTAAGCAGTctttcaattaaattcttcAGCGGAGATGTAATTGTTGCATCTTCGAATTGTGACCAAATTTTGGTTATAAACGCCACCACCGCAATGATCGAAAAACGTTTCCAATTATCGTTTCCCGAAGGCATCATCACCAGTATCTGCGCAGTTGAATTATTCGAGAATAAATTGATTGTCGCGATCAGCTCCCTAGCTTTGAAACAGAACGGTTGCTTTAAGTACCCCGAAAAGCTATTCGTCCACGTATGGGATATAGAAACCGGAGAACCATTGTCCAACATGCAAATGGAAAATACAGATGACATCGTTTATAAAGTGATAATTTGTAAAGATCTAATTACCGTATTGTCCCATCAACGTGTAGCGTACATTTACAATCTCACGAAAAAGCAAATTGATTACAGGCGGAAGGATGTCAATTGCGTTTGTTACGATGATGACAAGGTTGCGATAGGCAGCTCCACAGGTGCTGTGGTAGTACTAGACTCGAATTACACTGAATTGGTGACACTTGATTGCTGCGATAACGATAAGACAATTATTGAAATCCAGctAAAAGAGAATTATGTGGTTACTATATATGGACCAACTAGCGGACCCAGTCTAAGGGCTTGTATTTGGAATGTCAGTACGGGAGCTATATTATACCACGTCGAGAggACTCGATTTGTGCGTACACTTGTAGTCACAAATTGTGCACAAAAATGGTTTCTCACCGGTGTGAATTCTGAAGTGCCTTTCCAAATTGCTCTTCAGTGCATATTTGCAATTGCAAACCTCACACACGAACGGTTTCACGCCGGAATGGGTCCTCACGTGCGTTTTCAAGTAGTTCTTCGATGCACTTTTGTAGTCACAAATCGTACAGACGTACGGTCGCTCACCGGTATGAGTCATGATGTGTGCATTCAGGCTGGCTCGGAGGGCAGTTTTATAGTCACAAACTTCACACACGAAGGGTTTTTCTCCGGTACAGCTATGGATAAAGGTGAATTTTCTGAAGTTTCCCAAGAGGACGAAAGTGTAAAGGTCGAAATAAAATCGGAACAGATAGAGGATAATTTGGAAGACTTGCATCACTCGGTTGATATAAAGGAAGAGCCACCTTCACCGAAGGCTGAAATCGAGCCGTTCAAATGCGGAATTTGTGACTTTACCAGTTCGATGAATTTACGTGTGAAGGAGCATCTGAAGACCCACGCCGGAGCGAAACCATTCGAGTGTGGTGGTTGCGACTTCAGAAGTGCTCACAAATCCAGCTTGAAGGAACACTTGATCACACATACTGGAGCGAAACCCTATCGGTGTAAGCTTTGCGACTTCAAAAGCGCATACAGAGCGGCTTTGGGACGACATTCCATGATTCACACCGGCCAAAAGCCGTTTGAGTGCGCAGTTTGCGACTACAAATGCGCCCAGCGAggagttttgaaaaaacactCGATGattcataccggcgagaaaccatttgtttgtaatttttgcgaTTACCAAACTTCCCGAAAGTCAACCTTGAAGCAACATTTAATGACGCACACCGAAGAAAAACCATTTGTTTGCGAAGTTTGCGGTTATCGAAGTTCCCGAAAGTGTACTTTGAAAGAACATTTCATGACTCATACGACGGATAAACCGTACGTGTGTGAATTTTGTGATCAAAAATACGGATTGAAGAGTAAGTTAATCAGACATTTAAGAGCTCATACTGGCCAGAAACCGTTCATTTGTGAACGATGTGATTACTATTTTTCGCAGAGCGGATTGTTGCGACTGCACATGAAAGTTCATTCCGACGACAAACCGTTTGAATGTGGAGATTGCGATTACAGCTGTCCGAGCAAGTCACGGTTGAAAGAACATTCCACGACTCATACTGGCCAGGAACCGTTTCTGTGTGTAATTTGCGACTACAAATGCGCATTAAAGAATTGTTTGATTAAGCATTTACGGACTCATCCTCAATTCAGTCTCGGAGTGAATACGTAG
Protein Sequence: MDQVLQTPCSIVIKSEQIEDGDIKLEELHHSIDIKDDRSLPEAPADAETESQVSRLFDCAGCKAQFTNKSQLGRHNVKVHRDSKLFKCEVCGYNFTKRSNLKVHLRRHTGEKPFACDVCDYHATRLTDLKRHSVIHTGQKPFACETCDYKASRSADLKVHLMIHLAQQPFACNICDYNCARERDLIAHSVMHTGEKPFTCEIHTGEKPFACEICDYKALRSGDLKRHLMIHTGDKPHACELCDSKFTQKETLKVHLRRHTGERPYTCEICGYKSTLNARDCCTKWRSMMQSFWKIKCLSECYSETEDDLNSKLYQQFMRNYSRWEAIYLYNSQLENNWLKQNYRTVVNTVEKLSSLSIKFFSGDVIVASSNCDQILVINATTAMIEKRFQLSFPEGIITSICAVELFENKLIVAISSLALKQNGCFKYPEKLFVHVWDIETGEPLSNMQMENTDDIVYKVIICKDLITVLSHQRVAYIYNLTKKQIDYRRKDVNCVCYDDDKVAIGSSTGAVVVLDSNYTELVTLDCCDNDKTIIEIQLKENYVVTIYGPTSGPSLRACIWNVSTGAILYHVERTRFVRTLVVTNCAQKWFLTGVNSEVPFQIALQCIFAIANLTHERFHAGMGPHVRFQVVLRCTFVVTNRTDVRSLTGMSHDVCIQAGSEGSFIVTNFTHEGFFSGTAMDKGEFSEVSQEDESVKVEIKSEQIEDNLEDLHHSVDIKEEPPSPKAEIEPFKCGICDFTSSMNLRVKEHLKTHAGAKPFECGGCDFRSAHKSSLKEHLITHTGAKPYRCKLCDFKSAYRAALGRHSMIHTGQKPFECAVCDYKCAQRGVLKKHSMIHTGEKPFVCNFCDYQTSRKSTLKQHLMTHTEEKPFVCEVCGYRSSRKCTLKEHFMTHTTDKPYVCEFCDQKYGLKSKLIRHLRAHTGQKPFICERCDYYFSQSGLLRLHMKVHSDDKPFECGDCDYSCPSKSRLKEHSTTHTGQEPFLCVICDYKCALKNCLIKHLRTHPQFSLGVNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -