Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720625.1:35781793-35784249[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.031 1.6 10.1 0.8 2 23 136 158 135 158 0.93

2 13 2.7e-06 0.00014 22.9 4.9 1 23 188 210 188 210 0.99

3 13 0.00018 0.0091 17.2 1.5 1 23 216 238 216 238 0.97

4 13 3.3e-05 0.0017 19.4 0.7 1 23 244 267 244 267 0.98

5 13 4e-05 0.0021 19.2 2.1 1 23 270 292 270 292 0.98

6 13 0.00023 0.012 16.8 2.8 3 23 387 407 385 407 0.96

7 13 0.0047 0.24 12.7 1.5 1 23 413 435 413 435 0.99

8 13 2.3e-05 0.0012 19.9 2.6 1 23 441 463 441 463 0.96

9 13 1.5e-06 7.8e-05 23.7 4.8 2 23 469 490 469 490 0.97

10 13 6.2e-05 0.0032 18.6 0.5 1 23 496 518 496 518 0.95

11 13 1.3e-07 6.8e-06 27.0 1.8 1 23 524 546 524 546 0.99

12 13 0.0011 0.059 14.6 3.7 1 23 552 574 552 574 0.99

13 13 0.0001 0.0054 17.9 2.1 1 23 585 608 585 608 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.031	1.6	10.1	0.8	2	23	136	158	135	158	0.93
2	13	2.7e-06	0.00014	22.9	4.9	1	23	188	210	188	210	0.99
3	13	0.00018	0.0091	17.2	1.5	1	23	216	238	216	238	0.97
4	13	3.3e-05	0.0017	19.4	0.7	1	23	244	267	244	267	0.98
5	13	4e-05	0.0021	19.2	2.1	1	23	270	292	270	292	0.98
6	13	0.00023	0.012	16.8	2.8	3	23	387	407	385	407	0.96
7	13	0.0047	0.24	12.7	1.5	1	23	413	435	413	435	0.99
8	13	2.3e-05	0.0012	19.9	2.6	1	23	441	463	441	463	0.96
9	13	1.5e-06	7.8e-05	23.7	4.8	2	23	469	490	469	490	0.97
10	13	6.2e-05	0.0032	18.6	0.5	1	23	496	518	496	518	0.95
11	13	1.3e-07	6.8e-06	27.0	1.8	1	23	524	546	524	546	0.99
12	13	0.0011	0.059	14.6	3.7	1	23	552	574	552	574	0.99
13	13	0.0001	0.0054	17.9	2.1	1	23	585	608	585	608	0.96

Sequence Information

Coding Sequence: atgatttctgCCGATTCAACCATCAGTGAACGCCTTTTAGATATGTTTGCTTCTCTTTTACATGTTGAGGTAGAATCCGTTAAAACTTTATCAACACAGATTTGTAACTcttgtgaaaataaattaaagttgtcTTACAATTTTCAACAACAATGTCGacaatccaataaaaaatttgaagagtATGCAAAAGTTCAAAAGGAGCAAGCTGAACTTGTTAGTTTGACACGCGTTAATCTTGAGTTATCAAACAGTGGAGCAAAATGTGTATCCGAgatttgtaaagaaaattctaaaaattcagTGAAGAAATATTCAGCACGAAAGGTGCGGTTGGCACAATTTTCCCACATCGAAGTTGCAGAagcaattaaagaattaaggagaagttttgttcaaaatattgaatgttttaaatgtgGGTTTACTGGAAGTAATTCGAGATCATTATCAGTCCACATATCACATGTACATAAAGAGTTGAAAAATAGATGGTGTGTTGAATGTAATAAAGAATATGATGATCTtgaagaacattttaaaagccaTGAAAATGGTGGCTTTCAGTGTCGTTTCTGTAAGAAAATGTTTAGTACAAAAAGTCACCTGATTGAGCATATAAGAAGCCATTCGGttaccAAACGATTTAATTGCGAGATTTGTCGTAAGTCTTTTGTTTCTGCACGACGTTTAAGAACACATTTTCGGGTTCACTCCAATGAGAGACCATATAAGTGTTCCTTTTGTCCCAAAGCTTTTATTCAAATTGGTTTGCTAAAAAATCACTTAAAGAAGATGCACAACACATATAAGTGCAATTTTTGTGATCGaacatttgataaaaatcaattactgAAAGTTCATTTAAAGgaacattcaaatttgaataatttttgtattgattgcaatgttataattaaaaaagattgtGATCATATATGTGCCAACAAAGATGAAGTGAATGGAGAAGAGGTGGAAGAAGACTCAATTGAAAGTATAACCGATAATATTTTATTAGTtgctcaaaatttttgtacaatttgtaataaaaaagttcGAAGTTTGCCAATAcacattgaaaaaattcatactACTTCCAATTCCGattcaataaataatgaaatttctattaaaaatgaaaacgatACGAAGCATTTGTGTACGATTTGTGGAAAACACTTTAAAGCTTCATATAAATTAGGAATTCATATGAGAATACATACAGGGGAATTGCCTTACGAGTGTTCTTTCTGTAGCAAAAGAATGAATACGCGGGGCACGTTAATCACACATGAACGGACTCACACCGGAGAAAAACCACACATCTGTCATGTTTGTGGAAAAGGTTTTTCTCAATCAAATGTGCTGAATACTCACATGAAATTACATACCGGTCGCCCAGAAGTttgtaatatttgcaataaacgATTTTGTAGACGTTCCGAACTTAGGCTGCACATGCGAAAACATACAGgtGAAAAGCCCTATCTCTGTACAGAATGTGGACAAGCGTTTGTCCAACGCAGTCATTTAGTTGACCATAGTGCAACTCACAGCGATTTTCGTCCATATAAGTGCACATACTGTGACAGAGCgtttaaacaaaattccaCATTGAAGTCGCATATTCAAATACATCTTGGACAGAGACCTTTCAAGTGTAGTCAGTGCTCTTATGCCGGTCGGCAAAGTCACAAGCTAACAGAACACATGAAAACTCATACAGAGGATGCACCAAATCCCGATTGTCCTCATATGTGCAATATTTGCAACAAGggattttcaacttttgcaATGCTAACTTCTCACAGACAGAGAATTCATTGTTTGCCTACCGATCTTGCAGCGATGActatttga
Protein Sequence: MISADSTISERLLDMFASLLHVEVESVKTLSTQICNSCENKLKLSYNFQQQCRQSNKKFEEYAKVQKEQAELVSLTRVNLELSNSGAKCVSEICKENSKNSVKKYSARKVRLAQFSHIEVAEAIKELRRSFVQNIECFKCGFTGSNSRSLSVHISHVHKELKNRWCVECNKEYDDLEEHFKSHENGGFQCRFCKKMFSTKSHLIEHIRSHSVTKRFNCEICRKSFVSARRLRTHFRVHSNERPYKCSFCPKAFIQIGLLKNHLKKMHNTYKCNFCDRTFDKNQLLKVHLKEHSNLNNFCIDCNVIIKKDCDHICANKDEVNGEEVEEDSIESITDNILLVAQNFCTICNKKVRSLPIHIEKIHTTSNSDSINNEISIKNENDTKHLCTICGKHFKASYKLGIHMRIHTGELPYECSFCSKRMNTRGTLITHERTHTGEKPHICHVCGKGFSQSNVLNTHMKLHTGRPEVCNICNKRFCRRSELRLHMRKHTGEKPYLCTECGQAFVQRSHLVDHSATHSDFRPYKCTYCDRAFKQNSTLKSHIQIHLGQRPFKCSQCSYAGRQSHKLTEHMKTHTEDAPNPDCPHMCNICNKGFSTFAMLTSHRQRIHCLPTDLAAMTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00272998;
90% Identity: iTF_00272998;
80% Identity: -