Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:38206208-38211071[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0032 0.17 13.2 0.3 2 23 60 81 59 81 0.96

2 25 0.0031 0.16 13.2 4.3 1 23 87 109 87 109 0.97

3 25 0.0036 0.19 13.0 2.8 1 23 134 156 134 156 0.97

4 25 5.8e-05 0.003 18.7 1.9 1 23 162 184 162 184 0.99

5 25 1.2 60 5.2 4.0 1 23 190 213 190 213 0.96

6 25 0.00076 0.039 15.2 3.2 1 23 219 241 219 241 0.97

7 25 0.0027 0.14 13.4 0.5 2 23 299 320 298 320 0.97

8 25 8.3e-05 0.0043 18.2 1.2 1 23 326 348 326 348 0.98

9 25 2.8e-05 0.0015 19.7 2.3 1 23 354 376 354 376 0.98

10 25 0.0033 0.17 13.2 3.4 1 23 382 404 382 404 0.97

11 25 0.00055 0.029 15.6 1.0 1 23 410 432 410 432 0.99

12 25 1e-05 0.00053 21.0 0.7 1 23 438 460 438 460 0.98

13 25 0.011 0.55 11.6 5.9 1 23 466 488 466 488 0.98

14 25 0.25 13 7.3 5.1 1 23 494 517 494 517 0.95

15 25 0.24 12 7.3 0.9 2 23 524 545 523 545 0.95

16 25 0.0027 0.14 13.4 1.5 2 23 554 575 553 575 0.97

17 25 2.4e-05 0.0012 19.9 1.3 1 23 581 603 581 603 0.98

18 25 0.012 0.64 11.3 3.1 2 23 610 631 609 631 0.97

19 25 0.00099 0.052 14.8 0.2 1 23 637 659 637 659 0.98

20 25 0.0012 0.06 14.6 0.3 1 23 665 687 665 687 0.95

21 25 9.2e-05 0.0048 18.0 2.0 1 23 693 716 693 716 0.95

22 25 0.2 10 7.6 0.8 2 23 723 744 722 744 0.94

23 25 4.9e-05 0.0025 18.9 1.8 1 23 750 772 750 772 0.99

24 25 3.5 1.8e+02 3.6 4.7 1 23 778 801 778 801 0.94

25 25 0.00089 0.046 14.9 1.8 3 23 809 829 807 829 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0032	0.17	13.2	0.3	2	23	60	81	59	81	0.96
2	25	0.0031	0.16	13.2	4.3	1	23	87	109	87	109	0.97
3	25	0.0036	0.19	13.0	2.8	1	23	134	156	134	156	0.97
4	25	5.8e-05	0.003	18.7	1.9	1	23	162	184	162	184	0.99
5	25	1.2	60	5.2	4.0	1	23	190	213	190	213	0.96
6	25	0.00076	0.039	15.2	3.2	1	23	219	241	219	241	0.97
7	25	0.0027	0.14	13.4	0.5	2	23	299	320	298	320	0.97
8	25	8.3e-05	0.0043	18.2	1.2	1	23	326	348	326	348	0.98
9	25	2.8e-05	0.0015	19.7	2.3	1	23	354	376	354	376	0.98
10	25	0.0033	0.17	13.2	3.4	1	23	382	404	382	404	0.97
11	25	0.00055	0.029	15.6	1.0	1	23	410	432	410	432	0.99
12	25	1e-05	0.00053	21.0	0.7	1	23	438	460	438	460	0.98
13	25	0.011	0.55	11.6	5.9	1	23	466	488	466	488	0.98
14	25	0.25	13	7.3	5.1	1	23	494	517	494	517	0.95
15	25	0.24	12	7.3	0.9	2	23	524	545	523	545	0.95
16	25	0.0027	0.14	13.4	1.5	2	23	554	575	553	575	0.97
17	25	2.4e-05	0.0012	19.9	1.3	1	23	581	603	581	603	0.98
18	25	0.012	0.64	11.3	3.1	2	23	610	631	609	631	0.97
19	25	0.00099	0.052	14.8	0.2	1	23	637	659	637	659	0.98
20	25	0.0012	0.06	14.6	0.3	1	23	665	687	665	687	0.95
21	25	9.2e-05	0.0048	18.0	2.0	1	23	693	716	693	716	0.95
22	25	0.2	10	7.6	0.8	2	23	723	744	722	744	0.94
23	25	4.9e-05	0.0025	18.9	1.8	1	23	750	772	750	772	0.99
24	25	3.5	1.8e+02	3.6	4.7	1	23	778	801	778	801	0.94
25	25	0.00089	0.046	14.9	1.8	3	23	809	829	807	829	0.95

Sequence Information

Coding Sequence: ATGGAAACTCCGTGTCATTCGAATGGTGACGTTCAAATTAAAACGGAACAAGACGAAATGGATTTCATTAAGCTGGAAGACTTGCATCATTCCATCGATATTAAAGAAGAGATCCCTGTTTTAGACTGCCAGCCGGATGGGGAAAGCAAACCGAGAACAATGGGGAGGAAACGGCTGCCGTGTGAAATCTGCGGTTTTCAATCCGACGATAAGACAAACTTTCAAACCCATTTACAAAGCCACGCTGGTGAGAAACCGTTTGCATGTGAGATTTGTGATTTTACCTGTGCACGTCGACGGCATTTACGAAACCATTCCAAAATTCATTCCAACGAGAAACCGTTCACATGCGAAACTTGTAACCAAAGGCACATGAGGAGTCATACCGGTGAAAAACCATACAAGTGCGAAATTTgcgaacttaaattttcagataaatCAACTTGTAAGAAACATTTGGTAATTCATAGTGACGAGAAAAAGTTTACGTGTAATATTTGTCCCTATCAAAGTAAACGTAAGCGAGATTTAACTGTTCATTATAGAACTCACACCGGGGAGACACCGTTTACTTGTGCAATATGCGATTACAAATGTAGAGAGAGACGAACTATAGATAAGCATTATAATAAGACTCATCCCGGCTATAAACCGTTTGCTTGTGAAACTTGCGACTATAAATGTTTGCAAAAGGAGGATTTAAGAAGACACATGAGAACTCACGAACCTGCGTGTCATTCCAACGGTGGCTTACAAATCAAAACGGAGCAGAACGAACAGGATTGCATTGTTAAGTTGGAAGATTTGCATCATTCCATCGACATTAAAGACGAAACTACAACAGTACAATACCAAGCACATGAAGAACGCAAGCCAggatcaaaaaaattattgccctgtgaaatttgtgacttCAAATCGGAAGATAAAACCAACTTTAAATTACACTTACAAACCCACAACGGAGGGAAACCGTTtacgtgtgaaatttgtggaTTTGCATGTGCTCGCCGATACCTATTAAGGAACCACGTTAAGATTCATTCCATCGAGAAACCGTTTACATGCGAAATTTGTAATCGTAAATTTGTCGATCGGAGAACTTTTAAACGGCACGTAAAAATTCATACCGATCAGAAGTTGTTTTCGTGTGAAACTTGCGACTATAAATGTACAAGTCGAGGGGCCTTAAATCACCATTTAGTCATGCATTCCGACAAGCGGTCGTTTCAGTGCAACCTATGCAGCTTTACGACTGCACGTAAAGGATCGCTAAAGATGCACTTAATAACTCATATTAACGAGAAGCAGTTTACGTGTGAGATTTGTGACCGTAAGTTCGCCACTGCAAATTATTTACGAAACCATTCCAGAGTTCATACTGGCGATCGTCAATTCCAGTGTTATACCTGCAGCCACACAACTTCAAGCAAACGAAGCTTACGGaatcatttaaaaagtcaCACCGAGAAGGAATTGTTCACGTGTAAGTTATGCCAACGCAATTACACGCTTAAACATAGATTAAAACAACATTACGTAAAAGATCATCCAGGCGAACAACCTATTTCGTGTGAATTCTGCGACCTTAAATTTATGTATCACATAGCCTATCGAAAACACTTAGTAATTCACACTGCGGAGAACCAGAAAAAGTTGACGTGCAACCTCTGCGGTTATATAGCCAAGCGTACCTACgatttaaaaatccaccatCGATCGCACACCGGGGAGCGGCCTTTCAAATGCGAATTGTGCGATTATTCCTGTACCCGTCGAGCCAATTTGATAATACATGTTAAAATTCACACTCGCGGGGAACCCGTTACCTGTAAAACTTGCTATCATAAATTTGTAGATGAAAAGTCTTATAAAGTTCATTTAAGAAGTCACACCGGGGAGAAACCCTTTTCGTGTACTGTTTGTGACTATAAATCTGCAAGTAAAGCAGAGTTAAACAGCCACGTAGCAACTCATACCGGCCAGCTGCCGTTTCTCTGCGAGATATGTGGTTATGGAACTTCGTATAAAACAAACTTCGAGACTCATCTGTTAATCCACACCGACGTCAAACAATTTGCCTGCGATATTTGTGATCATAGTTATAAAAGTAACACGAGTTTAAAACGACATGTTTTACGAAGTCACTCTGTCGACAAACCGGTTACTTGTGCAATCTGCGAGCTTAAATTTTCAGACAAGGAAAGTTGTAAATCTCATCTGGTAATTCATAATAACGAGAAGCAGTTTACGTGTAACATTTGTGACTACAAAGGTAAACGGAAACAAGATTTAACGGTTCATTATAGAACTCATACCGGTCTGACGCCATTTTTGTGTAAAGTGTGCGACTACCAATGTAAAGAGAGACGAACTATGGATAAACATTATAACAAGACTCATCCGGACTATAAACCGTTGGCTTGTGAAActtgtgattttaaatgttcgCAGAAAGACGATTTGAAAAAACATGCGAGAGCTCATCTGGACGGTAAGCCGTTTGAGGGGACAAGTAAGTTGGCCCACTAA
Protein Sequence: METPCHSNGDVQIKTEQDEMDFIKLEDLHHSIDIKEEIPVLDCQPDGESKPRTMGRKRLPCEICGFQSDDKTNFQTHLQSHAGEKPFACEICDFTCARRRHLRNHSKIHSNEKPFTCETCNQRHMRSHTGEKPYKCEICELKFSDKSTCKKHLVIHSDEKKFTCNICPYQSKRKRDLTVHYRTHTGETPFTCAICDYKCRERRTIDKHYNKTHPGYKPFACETCDYKCLQKEDLRRHMRTHEPACHSNGGLQIKTEQNEQDCIVKLEDLHHSIDIKDETTTVQYQAHEERKPGSKKLLPCEICDFKSEDKTNFKLHLQTHNGGKPFTCEICGFACARRYLLRNHVKIHSIEKPFTCEICNRKFVDRRTFKRHVKIHTDQKLFSCETCDYKCTSRGALNHHLVMHSDKRSFQCNLCSFTTARKGSLKMHLITHINEKQFTCEICDRKFATANYLRNHSRVHTGDRQFQCYTCSHTTSSKRSLRNHLKSHTEKELFTCKLCQRNYTLKHRLKQHYVKDHPGEQPISCEFCDLKFMYHIAYRKHLVIHTAENQKKLTCNLCGYIAKRTYDLKIHHRSHTGERPFKCELCDYSCTRRANLIIHVKIHTRGEPVTCKTCYHKFVDEKSYKVHLRSHTGEKPFSCTVCDYKSASKAELNSHVATHTGQLPFLCEICGYGTSYKTNFETHLLIHTDVKQFACDICDHSYKSNTSLKRHVLRSHSVDKPVTCAICELKFSDKESCKSHLVIHNNEKQFTCNICDYKGKRKQDLTVHYRTHTGLTPFLCKVCDYQCKERRTMDKHYNKTHPDYKPLACETCDFKCSQKDDLKKHARAHLDGKPFEGTSKLAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -