Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:8463247-8465202[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00014 0.007 17.5 1.0 1 23 101 123 101 123 0.96

2 16 6.3e-05 0.0033 18.6 4.5 1 23 129 151 129 151 0.97

3 16 0.00038 0.02 16.1 4.4 1 23 157 179 157 179 0.98

4 16 3.9e-05 0.002 19.2 4.6 1 23 226 248 226 248 0.98

5 16 4.3e-05 0.0022 19.1 2.3 3 23 256 276 254 276 0.98

6 16 3.6e-08 1.9e-06 28.8 1.1 1 23 282 304 282 304 0.98

7 16 0.0009 0.047 14.9 1.0 1 23 310 332 310 332 0.98

8 16 0.0002 0.011 17.0 1.2 1 23 338 360 338 360 0.98

9 16 5.2e-05 0.0027 18.8 1.6 3 23 415 435 413 435 0.96

10 16 6.6e-05 0.0034 18.5 2.1 3 23 443 463 441 463 0.98

11 16 2.5e-05 0.0013 19.8 4.3 1 23 469 491 469 491 0.98

12 16 0.0027 0.14 13.4 2.3 1 23 497 519 497 519 0.98

13 16 0.0011 0.056 14.7 3.5 1 23 525 547 525 547 0.97

14 16 0.00026 0.013 16.6 1.2 1 23 553 575 553 575 0.99

15 16 0.0015 0.076 14.3 5.1 1 23 581 603 581 603 0.98

16 16 7.7e-06 0.0004 21.4 1.6 1 23 609 631 609 631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00014	0.007	17.5	1.0	1	23	101	123	101	123	0.96
2	16	6.3e-05	0.0033	18.6	4.5	1	23	129	151	129	151	0.97
3	16	0.00038	0.02	16.1	4.4	1	23	157	179	157	179	0.98
4	16	3.9e-05	0.002	19.2	4.6	1	23	226	248	226	248	0.98
5	16	4.3e-05	0.0022	19.1	2.3	3	23	256	276	254	276	0.98
6	16	3.6e-08	1.9e-06	28.8	1.1	1	23	282	304	282	304	0.98
7	16	0.0009	0.047	14.9	1.0	1	23	310	332	310	332	0.98
8	16	0.0002	0.011	17.0	1.2	1	23	338	360	338	360	0.98
9	16	5.2e-05	0.0027	18.8	1.6	3	23	415	435	413	435	0.96
10	16	6.6e-05	0.0034	18.5	2.1	3	23	443	463	441	463	0.98
11	16	2.5e-05	0.0013	19.8	4.3	1	23	469	491	469	491	0.98
12	16	0.0027	0.14	13.4	2.3	1	23	497	519	497	519	0.98
13	16	0.0011	0.056	14.7	3.5	1	23	525	547	525	547	0.97
14	16	0.00026	0.013	16.6	1.2	1	23	553	575	553	575	0.99
15	16	0.0015	0.076	14.3	5.1	1	23	581	603	581	603	0.98
16	16	7.7e-06	0.0004	21.4	1.6	1	23	609	631	609	631	0.98

Sequence Information

Coding Sequence: ATGATTAAAGAAGAACCAACAGAAGAGTTTGAAGAAGAACACATTCAGAAGATAgcaaacaatttgtatttacacaGTGATcatgaaattaaaatggaagtACTGACGGAAGTTGACTGCAAGATTGAGGAATTGCACGATGTAATTGATATTAAAGATGAATATTCACCTTTCGATTCTAATAGTCCAGAGGCGTGGGAAGAAAACTCCTCGTCAGACAGCGACGTTGATGACTCAAATTATCTACCTTCTTCAAAATCAACTATCGTAAAAGTGCAAAGTAGCAATGGcgaaaaatcatttttgtgtGGGATATGCaatgtaacttttttaagaaaaaacacATTGGAGAGACACATGAGAACTCACACTGGTGAAAAACCGTTTGCCTGTGAATTTTGCGACAAGAAATTTCCTCGTAGCTGCCAACTTACGAGTCATAAAAGAACCCACACCGGAGAAAAGCCGTTCGTTTGCAAAGtttgtgatttaaaattttcgtatcgATGTAGTTTGAAGAATCACGAAAAAACTCACTCGGATGATAAAGAAATGCCGAGCACTTCGCAAGAAAAGTCTGTCGAAACTGCAATTGACTCCGACGACCCAAACGCGCAGATTGAGAAGATCAAAAAAGCGGTCAAGTGCGAAGTTTCAGAATCGGGTGTGAAAAGTTATCATTGTACGATTTGTAATACAAAGTTTTCGAAAAAGAATACATTGGATAGACACATGAGGATACATACCGGTGAGAGACCGTTTGGATGTGACGTTTGCGGGAAAAAGTTTCCGCGTAATTGCCAGCTGTCCAGTCATCTCAAGACGCAcaccggggaaaaaccgtttgtATGTGAAATCTGTGGTTGGAAGTTTTCGCACAAATCCGGTTTGACGAACCACATAAGAACACACACCGGCGAAAAACCTCACGAATGCGAATTGTGCGGTGCCAAATTTCTTGAAAAGGGAACACTACAAAGGCACTTAAGAACTCAtaccggggaaaaaccgttttcgtgcgaaatttgcaatttgaaatttttacgcAAAGATTACTTGCAAACTCATTTGCGAGTTCACGTATCAAATACTTCGCAAATAGTGGAACAAGgttgtgaaattaaaatggaacCAACACCGGATACGGAGTACCAATTGGACGAAGGAGGGTACGGTAGTTTAGAAATCAAGAATGATTTGTTTTCTAGGTTGAAAGCCCAGATAGGAGGAAAGACGCACCTGTgtacaatttgcaatatagAATTTCCAAAGAAGAGTACATTGGACCGACATATACGAACTCATACTGGCGAAAAACCGTTTGGATGTGAACTATGCGGTATGAGGTTTCCACGAAATTGCCAACTAACCAGTCACTTGAGAACGCACACGGGCGAAAAATCATTCGTTTGCGAGATATGCGGGGCCAAATTTTCACACAAGTGTACCTTAAACAACCATTTGAAAACACACAGTGGGGAAAAACCGCACGTATGCAAATCTTGTGGTTTAAAATTCCTCGAAAAGGGAACTTTACAGCGGCATTTGAGAACCCACACAGGCGAAAAGCCGTTTTCGTGTAATTTGTGCGAGAAAAAGTTCCCACGCATCTGTCAACTCAAGCGTCACTCGATAACCCACACCGGCAATAAACGTTTCGAGTGCAACTTttgtacattaaaatttgcagaaaaatCAAAGTTAGGAAATCACATTAGAACTCATACTGGTGAAAAACCGTACCATTGTGATTtgtgcgattataaatgcTCTATTAAAGACAACTTGCGGAGCCACTTGAGAAGTCACACGGGGGAAAAACCGTATGCTTGTGAAGTTTGCGATTACAAGTGCACGTCGAAAGCTAACCTACGAAACCATTTGAGAATCCACCCGGGACAGAATCAACTGGCAGATGAAGTAGTCGTTCGTAGAGTGAAAATTTACAGTAATTGA
Protein Sequence: MIKEEPTEEFEEEHIQKIANNLYLHSDHEIKMEVLTEVDCKIEELHDVIDIKDEYSPFDSNSPEAWEENSSSDSDVDDSNYLPSSKSTIVKVQSSNGEKSFLCGICNVTFLRKNTLERHMRTHTGEKPFACEFCDKKFPRSCQLTSHKRTHTGEKPFVCKVCDLKFSYRCSLKNHEKTHSDDKEMPSTSQEKSVETAIDSDDPNAQIEKIKKAVKCEVSESGVKSYHCTICNTKFSKKNTLDRHMRIHTGERPFGCDVCGKKFPRNCQLSSHLKTHTGEKPFVCEICGWKFSHKSGLTNHIRTHTGEKPHECELCGAKFLEKGTLQRHLRTHTGEKPFSCEICNLKFLRKDYLQTHLRVHVSNTSQIVEQGCEIKMEPTPDTEYQLDEGGYGSLEIKNDLFSRLKAQIGGKTHLCTICNIEFPKKSTLDRHIRTHTGEKPFGCELCGMRFPRNCQLTSHLRTHTGEKSFVCEICGAKFSHKCTLNNHLKTHSGEKPHVCKSCGLKFLEKGTLQRHLRTHTGEKPFSCNLCEKKFPRICQLKRHSITHTGNKRFECNFCTLKFAEKSKLGNHIRTHTGEKPYHCDLCDYKCSIKDNLRSHLRSHTGEKPYACEVCDYKCTSKANLRNHLRIHPGQNQLADEVVVRRVKIYSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00271524;
90% Identity: -
80% Identity: -