Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720628.1:37430112-37431821[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.5e-05 0.0023 19.0 0.1 1 23 86 108 86 108 0.98

2 17 1.4e-05 0.00074 20.6 2.5 1 23 114 136 114 136 0.98

3 17 7.1e-06 0.00037 21.5 2.9 3 23 144 164 142 164 0.98

4 17 0.00039 0.02 16.1 2.5 1 23 170 192 170 192 0.96

5 17 2.6e-05 0.0013 19.8 2.1 1 23 198 220 198 220 0.98

6 17 0.00015 0.0079 17.4 5.4 1 23 226 248 226 248 0.99

7 17 0.00017 0.009 17.2 2.3 3 23 256 276 254 276 0.98

8 17 0.0062 0.32 12.3 1.5 1 23 282 304 282 304 0.94

9 17 0.00034 0.018 16.3 3.1 3 23 312 332 310 332 0.98

10 17 0.00017 0.0088 17.2 2.9 1 23 338 360 338 360 0.99

11 17 8.9e-05 0.0046 18.1 3.7 1 23 366 388 366 388 0.98

12 17 0.00085 0.044 15.0 3.5 3 23 396 416 394 416 0.98

13 17 5.3e-05 0.0028 18.8 3.9 1 23 422 444 422 444 0.99

14 17 4e-05 0.0021 19.2 2.0 1 23 450 472 450 472 0.99

15 17 2e-05 0.001 20.1 0.9 1 23 478 500 478 500 0.98

16 17 7e-05 0.0036 18.4 2.7 1 23 506 528 506 528 0.98

17 17 0.0011 0.057 14.7 3.5 1 23 534 556 534 556 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.5e-05	0.0023	19.0	0.1	1	23	86	108	86	108	0.98
2	17	1.4e-05	0.00074	20.6	2.5	1	23	114	136	114	136	0.98
3	17	7.1e-06	0.00037	21.5	2.9	3	23	144	164	142	164	0.98
4	17	0.00039	0.02	16.1	2.5	1	23	170	192	170	192	0.96
5	17	2.6e-05	0.0013	19.8	2.1	1	23	198	220	198	220	0.98
6	17	0.00015	0.0079	17.4	5.4	1	23	226	248	226	248	0.99
7	17	0.00017	0.009	17.2	2.3	3	23	256	276	254	276	0.98
8	17	0.0062	0.32	12.3	1.5	1	23	282	304	282	304	0.94
9	17	0.00034	0.018	16.3	3.1	3	23	312	332	310	332	0.98
10	17	0.00017	0.0088	17.2	2.9	1	23	338	360	338	360	0.99
11	17	8.9e-05	0.0046	18.1	3.7	1	23	366	388	366	388	0.98
12	17	0.00085	0.044	15.0	3.5	3	23	396	416	394	416	0.98
13	17	5.3e-05	0.0028	18.8	3.9	1	23	422	444	422	444	0.99
14	17	4e-05	0.0021	19.2	2.0	1	23	450	472	450	472	0.99
15	17	2e-05	0.001	20.1	0.9	1	23	478	500	478	500	0.98
16	17	7e-05	0.0036	18.4	2.7	1	23	506	528	506	528	0.98
17	17	0.0011	0.057	14.7	3.5	1	23	534	556	534	556	0.97

Sequence Information

Coding Sequence: ATGGATAAGAAGATGCAGTTTTCGCAAGAGGTGGAAAAAGTcagtagaaaaattaaaactgaaaaaatggaAGTAGTGGATATCAGCTTGGAAGCAGTTCATATCACCGAGGAAATTGAAAGTGGTAGCAAggaaattaaacttgaagagaCGGATGGCATGGATATCAAGCTGGAAGAATTACATCATTCGattgatattaaagaagaGGCTTCGGGTAAGGATAGAAAATTGGACCGAGGTTGCAAAACACAATTTGAATGTGGGGTATGCGATGCAGCATTTATTAACAAAGTGCAACTCAGAAAGCATGCAAAAATTCATTCCAACCCGAAGCAGTTCGAGTGCACGATTTGTGAGTATAAATGTTCTCGTAAAGGGCAATTGAAAATTCATATACAAACCCACACTGGGCACAAGCCGTTCGGGTGTACAATGTGCGATTACAAATTTTCGCAGAAAGGACACCTGACTTATCATATACGAACCCACACCGgggaaaaaaagtttgaatgccagctttgtgattataaatcttTCCGGAAAAATCAATTGAGAGATCATTTGAGGACCCACACCGGTGAGAAACCGTACGAgtgtaatatttgcgattataaatcttcTCGGAAAGGACATCTACAGGTGCACTTTCGAATTCACAccggcgaaaaaccatttCAGTGTAATAtctgtgattataaatgttctcataAAGGAGTTTTGAAATCTCACTTACGAACTCATACCGGGGAGAAACCGTTCGGGTGCACAATTTGCGATTATAGATGTTCCCAGAAGGGACAACTGCAATATCACTTGCAAACCCACACCGGGGACAAACCGTTCGATTGCAAACTTTGCAATTACAAATCTTTTCGGAAGGTACAATTGAAAGATCACTTACTGATCCACACAGGGGAGAAACCGTTTGGGTGCAACCAGTGCAATTATAAAACCTCTCGGAAGGGACATTTGAAAGATCACTTGCGGATTCATTCCGGTGAGAAAATGTTCAAGTGTACAGTCTGCGGGTATAAATGTTCCTACAAAGGAGTGCTGAAATCTCACTTAAGGATTCACACAGGAGAGAGGCCCTTCGAGTgtacaatttgcaattataaatgttcccAAAACGGCCAACTGAAATATCATTTACAAACACATACCGGAGAGAAACCGTACGGCTGCACATTGTGCGATTATAGATCTTCCCGAAGGATGCATTTGAAATCGCATCTGCGGACCCATACCGGGGAGAAACCCTTCCAGTGTACAatctgcgattataaatgctCTCAAAAGggacaattaaaatatcacgTACAAACTCATACCGGAACGAAGCCCTTCGAGTGTAAACTCTGCGATTACAAATCTTCTCAGAAAGGACATTTGGCAGAACATTTACGAACCCACACAGGCGAGCGGCCGttcgagtgtaacatttgcgagtTTAAAAGTTCTCAAAAAGGACAATTGAAAGTTCACATGCAGACCCACACCGGGCAAAAACCGTTTGAATGTGAactttgcgattataaatcttcTCGAAAGATACATTTGAGAGATCATCTGCGAACTCACACCGGAGAGCGACCGTTTGAGTGCACCCTTTGCGAGTATAAATGTTCACAAAAAGCTTATTTAAAGCGGCATGCACTCAAGCATCGGCAAGTCGAACCCCCTTCCGATCTGGTCTATTTGGATTGA
Protein Sequence: MDKKMQFSQEVEKVSRKIKTEKMEVVDISLEAVHITEEIESGSKEIKLEETDGMDIKLEELHHSIDIKEEASGKDRKLDRGCKTQFECGVCDAAFINKVQLRKHAKIHSNPKQFECTICEYKCSRKGQLKIHIQTHTGHKPFGCTMCDYKFSQKGHLTYHIRTHTGEKKFECQLCDYKSFRKNQLRDHLRTHTGEKPYECNICDYKSSRKGHLQVHFRIHTGEKPFQCNICDYKCSHKGVLKSHLRTHTGEKPFGCTICDYRCSQKGQLQYHLQTHTGDKPFDCKLCNYKSFRKVQLKDHLLIHTGEKPFGCNQCNYKTSRKGHLKDHLRIHSGEKMFKCTVCGYKCSYKGVLKSHLRIHTGERPFECTICNYKCSQNGQLKYHLQTHTGEKPYGCTLCDYRSSRRMHLKSHLRTHTGEKPFQCTICDYKCSQKGQLKYHVQTHTGTKPFECKLCDYKSSQKGHLAEHLRTHTGERPFECNICEFKSSQKGQLKVHMQTHTGQKPFECELCDYKSSRKIHLRDHLRTHTGERPFECTLCEYKCSQKAYLKRHALKHRQVEPPSDLVYLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -