Basic Information

Insect: Cantharis lateralis
Gene Symbol: -
Assembly: GCA_963170105.1
Location: OY720629.1:38221357-38230170[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00015 0.0078 17.4 0.5 1 23 579 601 579 601 0.98

2 16 0.00051 0.026 15.7 0.2 1 23 607 630 607 630 0.97

3 16 0.0074 0.39 12.0 0.7 1 23 641 664 641 664 0.94

4 16 0.00043 0.022 15.9 0.3 2 23 684 705 683 705 0.96

5 16 0.36 19 6.7 6.4 1 23 711 733 711 733 0.82

6 16 0.00028 0.014 16.5 0.6 3 23 743 763 741 763 0.97

7 16 7.8e-06 0.00041 21.4 5.0 1 23 769 791 769 791 0.98

8 16 0.00092 0.048 14.9 2.3 1 23 797 819 797 819 0.98

9 16 1.5e-06 7.8e-05 23.7 0.2 1 23 825 847 825 847 0.98

10 16 0.00099 0.051 14.8 1.5 1 23 853 875 853 875 0.98

11 16 9e-07 4.7e-05 24.4 1.9 3 23 883 903 881 903 0.96

12 16 2.2e-06 0.00011 23.1 0.1 2 23 909 930 908 930 0.97

13 16 7.4e-05 0.0038 18.3 3.1 1 23 936 958 936 958 0.98

14 16 0.00077 0.04 15.1 0.4 1 23 964 986 964 986 0.97

15 16 6.1e-08 3.2e-06 28.0 0.9 1 23 992 1014 992 1014 0.99

16 16 0.027 1.4 10.3 0.1 1 20 1020 1039 1020 1041 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00015	0.0078	17.4	0.5	1	23	579	601	579	601	0.98
2	16	0.00051	0.026	15.7	0.2	1	23	607	630	607	630	0.97
3	16	0.0074	0.39	12.0	0.7	1	23	641	664	641	664	0.94
4	16	0.00043	0.022	15.9	0.3	2	23	684	705	683	705	0.96
5	16	0.36	19	6.7	6.4	1	23	711	733	711	733	0.82
6	16	0.00028	0.014	16.5	0.6	3	23	743	763	741	763	0.97
7	16	7.8e-06	0.00041	21.4	5.0	1	23	769	791	769	791	0.98
8	16	0.00092	0.048	14.9	2.3	1	23	797	819	797	819	0.98
9	16	1.5e-06	7.8e-05	23.7	0.2	1	23	825	847	825	847	0.98
10	16	0.00099	0.051	14.8	1.5	1	23	853	875	853	875	0.98
11	16	9e-07	4.7e-05	24.4	1.9	3	23	883	903	881	903	0.96
12	16	2.2e-06	0.00011	23.1	0.1	2	23	909	930	908	930	0.97
13	16	7.4e-05	0.0038	18.3	3.1	1	23	936	958	936	958	0.98
14	16	0.00077	0.04	15.1	0.4	1	23	964	986	964	986	0.97
15	16	6.1e-08	3.2e-06	28.0	0.9	1	23	992	1014	992	1014	0.99
16	16	0.027	1.4	10.3	0.1	1	20	1020	1039	1020	1041	0.93

Sequence Information

Coding Sequence: ATGGCGGAAAAGGACTTTTTACTAACCCAGTCCCAAGAATTAACCCTTTTGATGGAACAGGACGTggGAACCTATATGGCGTTGTTTCACAATAATTCCATGGAACACGAACAACCAAACGACAACCAATTGATTTACTCCGAGGAATTTGGCAATTTGTTTAAAGGTGAAACCGATACACAGCTTTTGCAAAACGATCAAAACAATTCCCAGTTGTTACAACAGCAAGTGACACAATTGCTACCACAAGAAGTTACCCAATTGTATCAGACTACAAACGATTTttccaatcaaaataatttcaatagtCAGTTGATGTCCTATCATTCTTCTTCCCTTTTAAATCGCCCTTCTTCTGCTCATGACATTTCTCCTCCTAATGTAAATCATCTTCCCGTTAACATCAATTATCTCCCTCCTATAAATTGTTTGTCTCAACAGATTAACGAAGTAAAGATGCCACCCATTCTTAGTACGGAAGATTATCCAGGTCcttataattttgatgtttatttCAACCCCCTTAGTGTTAGAAATCCATGGTGGtaCTCTCCAACTTTGGATAAGCTTTTTATTACAATGGGTGATTGTTTTCCtgttgattttaaaacagTGGGTGATGCTAAGGATCTTTATATTAGAGCTACCACTTTATATGCTTCACCACAATTAAATCAGGAAATTGTTATGCGCTGTTGGGCTCATAGTTCCGCAGATGATACTTTAAATACAGATGTTGCTGAACACGTAATAAGTCACGTTTTACGATGTCAagattcaaattcaaattatcaagGTGATGTTAAGATAAAGCAACATTTGAGCGTTGTGGTACCTTTGGGATTACCTCAACCTGGTACAGATGTTGTTCGTCTAATATACTACTTTGTATGTAAAAATTCATGTCCTACTGGTATAAACCGTCGACCTACCTGTGTGATTTTTGCTTTGGAAGATAAATTTGGCATGGTGAAAGGACGAAGGCGACTAAATGTACGTGTTTGTTCTTGCCCCAAGCGGgacaaagaaaaagaagaaaaaaatgctaTAAATGGTACAGCACCTCAgggtaaaaaaagaaaaatcgaaaaggtTGAAAAGAAAGAATCCAACGAAGACGCTACTCCCGATAATACAGAAGGAGAGAAACTTAACATCaacttTGACGTCtatggaaaaaaatataagcttTTGGCTTTATATGCTGTTCATGATCGTCTTAGTGGTGAATTAATCAGGCATGGAcctaacgaaaatttaaaaaaatcaattgccACGATCGAGGAACAAATTAGTAAGCTCCTACATTTTTTGTCTTATCCACTGATATCGATGGTCTTACTTGCTCTTACCGGTTGCGTCATTTTTAAAAGCGTGGAAGCTCAGGTGACATTTTCGAAAGATTGGGGAGCCGGAAAGCGATCTACCGAGAATTTTGATTGCCATGCAGCAATTAAGTCGGCCACGGCTTTATGTCACTTACTAATGgtaACATTTGAGGACGATTTGCCCAACACGGTGTGCCTTACGTGTTCACATAGAATTGAAAGTGCTTACTTGCTCAAGTTGCAATGTCGAGAATCGGATTCCACATTGCGTCGATATTTGAATTCGGAATTTCGAtctgaaaattgtaattctgATGAAGTAAAGAATAACGTAAGCCACGGTTTGCTGTTGGAATTAACGAATGAGGAATCCGAAAATTTTACAGATACAAATAAGAGTAAGACGTTTGAATGCGACGAATGTAAACTTGTGTTtgataaacaaaaactattaaGATTACATATTCGTGATcacaagaaaaagaaaaggtATGCCtgcaaaatttgtaacaaGAATTTTGTAGAAGTTCTTCAGCTAAATCAACACATGAATGTAATGCACAACAGGGaagaatatgaaaataatacgCTACATATTTGTACGGTATGtgatgataaatttaatactaacGCAAGCTTAATTGAACACATGGTACGTAAGCATACCCAAAAAGAAACTAAGGAATTAAGTGAACAAAACGCAACGCACAACGAAAGATTGATGTGTAATGTTTGTAATAAGACTTATTTAAAAGCCAGTAATTTGACCGCCCACATGGGAACTCATACGGGCGAAAAACCTTTCGAATGCCATATTTGTGGCAAGAGGTTTACTCAAGGACGCGCTCACGCTTGCCACATGCGAACACATTCTAAGGAAATCGAAAAACCTTACGGCTGTAAAATGTGCAACAAAGAATTTGCACGCGAAAGTCAATTAGCGGTCCATTCGAAAAAACATTTAGCTACAAAGTCATTTGTTTGCAGCATCTGTAATAAAAGTTGCTGTAATTCGGGTAACCTCAAGTCGCATATGCGTTTGCACACCGGAGATAAGCCATATTCTTGCAATATTTGTGGTCGAACGTTTGCTCAAAGTAATGCACACTCTTATCACATGAAAACTCATTCAGGTGAGAGACCTTTCGAATGCGACGTATGTCCGAAAGCTTTTACTACAAACGGCCAATTGATAAATCATCGCCGCTTACATACAGGCGAAAAACCGTTCGTGTGCGCTGTTTGCAATAAACGATTTACGCAAAAAGTTGCGCACACAATACACATGATGACTCACACGGGTAATAAGCCACACTTGTGCAGTATATGTGgcaaaaaatattcacaaaaCAGTCAATTGGTTGAACACATGCGCACTCACACGGGCGAAACTTTACAATGCAATGTCTGTGGGAAAGGTTACTCTACGGCTGGAAATTTAGGTGCTCACATGAAGACGCACACGGGTATAAAGACGCACGTGTGTCAAATTTGTCACAAGGGTTTTTATGTCGCTAACAAATTGGCAAAACATATGAGGACTCACACCGGAGAGAGGCCTTACGCTTGCACAATGTGTCCAAAACGTTTTACTAGTTCCGAAGTAATGAAAGTTCACAATAGAATTCACACAGGAGAAAGGCCATACCGTTGCAGTATTTGTGATAAAGGTTTCACAAATAATTCTCAACTCACCGTTCATCTCCGTTCTCACACTGGTCAGAGACCTTACGTATGTACAGTTTGTTTGCAAGGCTTTGCCACTTCTGCAAGTTTAAACTCTCACTCCAGTACTTGTACTAGGATGATCGAAACCGccatttattctaattttactCCAAATTAA
Protein Sequence: MAEKDFLLTQSQELTLLMEQDVGTYMALFHNNSMEHEQPNDNQLIYSEEFGNLFKGETDTQLLQNDQNNSQLLQQQVTQLLPQEVTQLYQTTNDFSNQNNFNSQLMSYHSSSLLNRPSSAHDISPPNVNHLPVNINYLPPINCLSQQINEVKMPPILSTEDYPGPYNFDVYFNPLSVRNPWWYSPTLDKLFITMGDCFPVDFKTVGDAKDLYIRATTLYASPQLNQEIVMRCWAHSSADDTLNTDVAEHVISHVLRCQDSNSNYQGDVKIKQHLSVVVPLGLPQPGTDVVRLIYYFVCKNSCPTGINRRPTCVIFALEDKFGMVKGRRRLNVRVCSCPKRDKEKEEKNAINGTAPQGKKRKIEKVEKKESNEDATPDNTEGEKLNINFDVYGKKYKLLALYAVHDRLSGELIRHGPNENLKKSIATIEEQISKLLHFLSYPLISMVLLALTGCVIFKSVEAQVTFSKDWGAGKRSTENFDCHAAIKSATALCHLLMVTFEDDLPNTVCLTCSHRIESAYLLKLQCRESDSTLRRYLNSEFRSENCNSDEVKNNVSHGLLLELTNEESENFTDTNKSKTFECDECKLVFDKQKLLRLHIRDHKKKKRYACKICNKNFVEVLQLNQHMNVMHNREEYENNTLHICTVCDDKFNTNASLIEHMVRKHTQKETKELSEQNATHNERLMCNVCNKTYLKASNLTAHMGTHTGEKPFECHICGKRFTQGRAHACHMRTHSKEIEKPYGCKMCNKEFARESQLAVHSKKHLATKSFVCSICNKSCCNSGNLKSHMRLHTGDKPYSCNICGRTFAQSNAHSYHMKTHSGERPFECDVCPKAFTTNGQLINHRRLHTGEKPFVCAVCNKRFTQKVAHTIHMMTHTGNKPHLCSICGKKYSQNSQLVEHMRTHTGETLQCNVCGKGYSTAGNLGAHMKTHTGIKTHVCQICHKGFYVANKLAKHMRTHTGERPYACTMCPKRFTSSEVMKVHNRIHTGERPYRCSICDKGFTNNSQLTVHLRSHTGQRPYVCTVCLQGFATSASLNSHSSTCTRMIETAIYSNFTPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00269519;
90% Identity: iTF_00269519;
80% Identity: iTF_00269519;